Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q41:Q58
Extra
PDB:
ATOM 1 O3' U A 40 -3.591 -45.431 45.238 1.00 66.87 O
ATOM 2 P A A 41 -3.287 -45.282 43.675 1.00 66.17 P
ATOM 3 OP1 A A 41 -4.115 -44.166 43.158 1.00 66.38 O
ATOM 4 OP2 A A 41 -3.355 -46.612 43.023 1.00 66.13 O
ATOM 5 O5' A A 41 -1.762 -44.799 43.704 1.00 64.09 O
ATOM 6 C5' A A 41 -0.785 -45.542 44.430 1.00 61.01 C
ATOM 7 C4' A A 41 0.347 -45.961 43.510 1.00 58.95 C
ATOM 8 O4' A A 41 -0.196 -46.697 42.382 1.00 58.17 O
ATOM 9 C3' A A 41 1.155 -44.806 42.922 1.00 57.85 C
ATOM 10 O3' A A 41 2.543 -45.062 43.075 1.00 56.85 O
ATOM 11 C2' A A 41 0.738 -44.778 41.453 1.00 57.54 C
ATOM 12 O2' A A 41 1.771 -44.322 40.600 1.00 57.75 O
ATOM 13 C1' A A 41 0.443 -46.254 41.203 1.00 57.05 C
ATOM 14 N9 A A 41 -0.419 -46.501 40.048 1.00 55.50 N
ATOM 15 C8 A A 41 -1.773 -46.689 40.041 1.00 55.02 C
ATOM 16 N7 A A 41 -2.276 -46.888 38.844 1.00 54.50 N
ATOM 17 C5 A A 41 -1.176 -46.824 38.009 1.00 54.27 C
ATOM 18 C6 A A 41 -1.029 -46.955 36.612 1.00 54.14 C
ATOM 19 N6 A A 41 -2.052 -47.185 35.788 1.00 54.08 N
ATOM 20 N1 A A 41 0.214 -46.839 36.090 1.00 54.41 N
ATOM 21 C2 A A 41 1.245 -46.604 36.917 1.00 54.58 C
ATOM 22 N3 A A 41 1.229 -46.466 38.246 1.00 54.63 N
ATOM 23 C4 A A 41 -0.021 -46.586 38.734 1.00 54.75 C
ATOM 24 P U A 42 3.370 -44.343 44.239 1.00 56.44 P
ATOM 25 OP1 U A 42 2.919 -44.885 45.542 1.00 56.35 O
ATOM 26 OP2 U A 42 3.321 -42.882 44.000 1.00 56.30 O
ATOM 27 O5' U A 42 4.853 -44.869 43.955 1.00 55.29 O
TER
ATOM 1 O3' A B 57 -0.140 -46.363 31.560 1.00 51.43 O
ATOM 2 P U B 58 -0.751 -47.842 31.425 1.00 52.67 P
ATOM 3 OP1 U B 58 -1.290 -47.958 30.053 1.00 52.83 O
ATOM 4 OP2 U B 58 -1.623 -48.126 32.591 1.00 51.80 O
ATOM 5 O5' U B 58 0.545 -48.774 31.541 1.00 53.18 O
ATOM 6 C5' U B 58 1.437 -48.614 32.638 1.00 54.16 C
ATOM 7 C4' U B 58 2.859 -48.981 32.248 1.00 55.07 C
ATOM 8 O4' U B 58 3.382 -48.045 31.267 1.00 55.94 O
ATOM 9 C3' U B 58 3.848 -48.957 33.404 1.00 55.36 C
ATOM 10 O3' U B 58 4.744 -50.058 33.271 1.00 55.08 O
ATOM 11 C2' U B 58 4.546 -47.608 33.236 1.00 55.73 C
ATOM 12 O2' U B 58 5.835 -47.597 33.806 1.00 55.60 O
ATOM 13 C1' U B 58 4.619 -47.518 31.715 1.00 56.16 C
ATOM 14 N1 U B 58 4.814 -46.139 31.148 1.00 56.74 N
ATOM 15 C2 U B 58 6.043 -45.776 30.612 1.00 57.21 C
ATOM 16 O2 U B 58 7.012 -46.513 30.567 1.00 57.60 O
ATOM 17 N3 U B 58 6.104 -44.494 30.114 1.00 57.52 N
ATOM 18 C4 U B 58 5.082 -43.556 30.101 1.00 58.01 C
ATOM 19 O4 U B 58 5.281 -42.442 29.626 1.00 58.70 O
ATOM 20 C5 U B 58 3.834 -44.002 30.671 1.00 57.72 C
ATOM 21 C6 U B 58 3.753 -45.249 31.159 1.00 57.28 C
ATOM 22 P G B 59 4.577 -51.355 34.196 1.00 54.82 P
ATOM 23 OP1 G B 59 5.790 -52.190 34.020 1.00 54.51 O
ATOM 24 OP2 G B 59 3.236 -51.922 33.930 1.00 54.90 O
ATOM 25 O5' G B 59 4.587 -50.764 35.683 1.00 54.28 O
TER
ATOM 2 P A A 41 -3.287 -45.282 43.675 1.00 66.17 P
ATOM 3 OP1 A A 41 -4.115 -44.166 43.158 1.00 66.38 O
ATOM 4 OP2 A A 41 -3.355 -46.612 43.023 1.00 66.13 O
ATOM 5 O5' A A 41 -1.762 -44.799 43.704 1.00 64.09 O
ATOM 6 C5' A A 41 -0.785 -45.542 44.430 1.00 61.01 C
ATOM 7 C4' A A 41 0.347 -45.961 43.510 1.00 58.95 C
ATOM 8 O4' A A 41 -0.196 -46.697 42.382 1.00 58.17 O
ATOM 9 C3' A A 41 1.155 -44.806 42.922 1.00 57.85 C
ATOM 10 O3' A A 41 2.543 -45.062 43.075 1.00 56.85 O
ATOM 11 C2' A A 41 0.738 -44.778 41.453 1.00 57.54 C
ATOM 12 O2' A A 41 1.771 -44.322 40.600 1.00 57.75 O
ATOM 13 C1' A A 41 0.443 -46.254 41.203 1.00 57.05 C
ATOM 14 N9 A A 41 -0.419 -46.501 40.048 1.00 55.50 N
ATOM 15 C8 A A 41 -1.773 -46.689 40.041 1.00 55.02 C
ATOM 16 N7 A A 41 -2.276 -46.888 38.844 1.00 54.50 N
ATOM 17 C5 A A 41 -1.176 -46.824 38.009 1.00 54.27 C
ATOM 18 C6 A A 41 -1.029 -46.955 36.612 1.00 54.14 C
ATOM 19 N6 A A 41 -2.052 -47.185 35.788 1.00 54.08 N
ATOM 20 N1 A A 41 0.214 -46.839 36.090 1.00 54.41 N
ATOM 21 C2 A A 41 1.245 -46.604 36.917 1.00 54.58 C
ATOM 22 N3 A A 41 1.229 -46.466 38.246 1.00 54.63 N
ATOM 23 C4 A A 41 -0.021 -46.586 38.734 1.00 54.75 C
ATOM 24 P U A 42 3.370 -44.343 44.239 1.00 56.44 P
ATOM 25 OP1 U A 42 2.919 -44.885 45.542 1.00 56.35 O
ATOM 26 OP2 U A 42 3.321 -42.882 44.000 1.00 56.30 O
ATOM 27 O5' U A 42 4.853 -44.869 43.955 1.00 55.29 O
TER
ATOM 1 O3' A B 57 -0.140 -46.363 31.560 1.00 51.43 O
ATOM 2 P U B 58 -0.751 -47.842 31.425 1.00 52.67 P
ATOM 3 OP1 U B 58 -1.290 -47.958 30.053 1.00 52.83 O
ATOM 4 OP2 U B 58 -1.623 -48.126 32.591 1.00 51.80 O
ATOM 5 O5' U B 58 0.545 -48.774 31.541 1.00 53.18 O
ATOM 6 C5' U B 58 1.437 -48.614 32.638 1.00 54.16 C
ATOM 7 C4' U B 58 2.859 -48.981 32.248 1.00 55.07 C
ATOM 8 O4' U B 58 3.382 -48.045 31.267 1.00 55.94 O
ATOM 9 C3' U B 58 3.848 -48.957 33.404 1.00 55.36 C
ATOM 10 O3' U B 58 4.744 -50.058 33.271 1.00 55.08 O
ATOM 11 C2' U B 58 4.546 -47.608 33.236 1.00 55.73 C
ATOM 12 O2' U B 58 5.835 -47.597 33.806 1.00 55.60 O
ATOM 13 C1' U B 58 4.619 -47.518 31.715 1.00 56.16 C
ATOM 14 N1 U B 58 4.814 -46.139 31.148 1.00 56.74 N
ATOM 15 C2 U B 58 6.043 -45.776 30.612 1.00 57.21 C
ATOM 16 O2 U B 58 7.012 -46.513 30.567 1.00 57.60 O
ATOM 17 N3 U B 58 6.104 -44.494 30.114 1.00 57.52 N
ATOM 18 C4 U B 58 5.082 -43.556 30.101 1.00 58.01 C
ATOM 19 O4 U B 58 5.281 -42.442 29.626 1.00 58.70 O
ATOM 20 C5 U B 58 3.834 -44.002 30.671 1.00 57.72 C
ATOM 21 C6 U B 58 3.753 -45.249 31.159 1.00 57.28 C
ATOM 22 P G B 59 4.577 -51.355 34.196 1.00 54.82 P
ATOM 23 OP1 G B 59 5.790 -52.190 34.020 1.00 54.51 O
ATOM 24 OP2 G B 59 3.236 -51.922 33.930 1.00 54.90 O
ATOM 25 O5' G B 59 4.587 -50.764 35.683 1.00 54.28 O
TER
Atoms:
OP1: (-4.115,-44.166,43.158)
OP2: (-3.355,-46.612,43.023)
C3': (1.155,-44.806,42.922)
C1': (0.443,-46.254,41.203)
C5': (-0.785,-45.542,44.430)
O4': (-0.196,-46.697,42.382)
C8: (-1.773,-46.689,40.041)
O2': (1.771,-44.322,40.600)
C6: (-1.029,-46.955,36.612)
C5: (-1.176,-46.824,38.009)
C4: (-0.021,-46.586,38.734)
P: (-3.287,-45.282,43.675)
C4': (0.347,-45.961,43.510)
C2': (0.738,-44.778,41.453)
C2: (1.245,-46.604,36.917)
N1: (0.214,-46.839,36.090)
N3: (1.229,-46.466,38.246)
N6: (-2.052,-47.185,35.788)
N7: (-2.276,-46.888,38.844)
N9: (-0.419,-46.501,40.048)
O5': (-1.762,-44.799,43.704)
O3': (2.543,-45.062,43.075)
OP2: (-3.355,-46.612,43.023)
C3': (1.155,-44.806,42.922)
C1': (0.443,-46.254,41.203)
C5': (-0.785,-45.542,44.430)
O4': (-0.196,-46.697,42.382)
C8: (-1.773,-46.689,40.041)
O2': (1.771,-44.322,40.600)
C6: (-1.029,-46.955,36.612)
C5: (-1.176,-46.824,38.009)
C4: (-0.021,-46.586,38.734)
P: (-3.287,-45.282,43.675)
C4': (0.347,-45.961,43.510)
C2': (0.738,-44.778,41.453)
C2: (1.245,-46.604,36.917)
N1: (0.214,-46.839,36.090)
N3: (1.229,-46.466,38.246)
N6: (-2.052,-47.185,35.788)
N7: (-2.276,-46.888,38.844)
N9: (-0.419,-46.501,40.048)
O5': (-1.762,-44.799,43.704)
O3': (2.543,-45.062,43.075)
C4: (5.082,-43.556,30.101)
N3: (6.104,-44.494,30.114)
OP1: (-1.290,-47.958,30.053)
OP2: (-1.623,-48.126,32.591)
C2: (6.043,-45.776,30.612)
C1': (4.619,-47.518,31.715)
C3': (3.848,-48.957,33.404)
O5': (0.545,-48.774,31.541)
O4': (3.382,-48.045,31.267)
C5': (1.437,-48.614,32.638)
P: (-0.751,-47.842,31.425)
C4': (2.859,-48.981,32.248)
C2': (4.546,-47.608,33.236)
O2': (5.835,-47.597,33.806)
N1: (4.814,-46.139,31.148)
O4: (5.281,-42.442,29.626)
O2: (7.012,-46.513,30.567)
C6: (3.753,-45.249,31.159)
C5: (3.834,-44.002,30.671)
O3': (4.744,-50.058,33.271)
N3: (6.104,-44.494,30.114)
OP1: (-1.290,-47.958,30.053)
OP2: (-1.623,-48.126,32.591)
C2: (6.043,-45.776,30.612)
C1': (4.619,-47.518,31.715)
C3': (3.848,-48.957,33.404)
O5': (0.545,-48.774,31.541)
O4': (3.382,-48.045,31.267)
C5': (1.437,-48.614,32.638)
P: (-0.751,-47.842,31.425)
C4': (2.859,-48.981,32.248)
C2': (4.546,-47.608,33.236)
O2': (5.835,-47.597,33.806)
N1: (4.814,-46.139,31.148)
O4: (5.281,-42.442,29.626)
O2: (7.012,-46.513,30.567)
C6: (3.753,-45.249,31.159)
C5: (3.834,-44.002,30.671)
O3': (4.744,-50.058,33.271)
Image (generated by PyMOL):