ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A759:A1461

Extra

PDB:
ATOM 1 O3' U A 758 107.837 17.181 -9.975 1.00 71.83 O
ATOM 2 P A A 759 109.245 16.387 -10.051 1.00 63.93 P
ATOM 3 OP1 A A 759 110.311 17.228 -9.432 1.00 60.06 O
ATOM 4 OP2 A A 759 109.421 15.892 -11.446 1.00 65.34 O
ATOM 5 O5' A A 759 108.986 15.076 -9.180 1.00 66.20 O
ATOM 6 C5' A A 759 109.403 13.785 -9.640 1.00 61.23 C
ATOM 7 C4' A A 759 109.309 12.769 -8.524 1.00 61.16 C
ATOM 8 O4' A A 759 109.540 13.444 -7.266 1.00 64.97 O
ATOM 9 C3' A A 759 107.955 12.100 -8.364 1.00 64.87 C
ATOM 10 O3' A A 759 107.877 10.954 -9.208 1.00 70.79 O
ATOM 11 C2' A A 759 107.929 11.740 -6.877 1.00 66.18 C
ATOM 12 O2' A A 759 108.629 10.551 -6.543 1.00 62.04 O
ATOM 13 C1' A A 759 108.686 12.917 -6.265 1.00 66.50 C
ATOM 14 N9 A A 759 107.832 14.003 -5.772 1.00 65.13 N
ATOM 15 C8 A A 759 107.680 15.246 -6.332 1.00 66.87 C
ATOM 16 N7 A A 759 106.918 16.051 -5.639 1.00 63.31 N
ATOM 17 C5 A A 759 106.524 15.285 -4.555 1.00 59.68 C
ATOM 18 C6 A A 759 105.722 15.574 -3.440 1.00 62.25 C
ATOM 19 N6 A A 759 105.161 16.774 -3.217 1.00 64.63 N
ATOM 20 N1 A A 759 105.514 14.589 -2.546 1.00 59.51 N
ATOM 21 C2 A A 759 106.084 13.401 -2.761 1.00 58.53 C
ATOM 22 N3 A A 759 106.867 13.010 -3.762 1.00 67.45 N
ATOM 23 C4 A A 759 107.056 14.012 -4.635 1.00 62.47 C
ATOM 24 P G A 760 106.746 10.878 -10.352 1.00 63.13 P
ATOM 25 OP1 G A 760 106.951 9.672 -11.211 1.00 54.17 O
ATOM 26 OP2 G A 760 106.770 12.230 -10.981 1.00 58.09 O
ATOM 27 O5' G A 760 105.404 10.663 -9.514 1.00 57.33 O
TER

ATOM 1 O3' G B1460 101.734 15.851 -0.458 1.00 52.88 O
ATOM 2 P U B1461 102.363 17.285 -0.831 1.00 56.46 P
ATOM 3 OP1 U B1461 102.208 17.419 -2.305 1.00 56.49 O
ATOM 4 OP2 U B1461 103.708 17.432 -0.218 1.00 57.85 O
ATOM 5 O5' U B1461 101.429 18.358 -0.109 1.00 60.45 O
ATOM 6 C5' U B1461 100.008 18.227 -0.086 1.00 56.62 C
ATOM 7 C4' U B1461 99.462 18.861 1.163 1.00 58.94 C
ATOM 8 O4' U B1461 100.156 18.272 2.277 1.00 62.82 O
ATOM 9 C3' U B1461 99.662 20.375 1.300 1.00 57.74 C
ATOM 10 O3' U B1461 98.413 21.048 1.264 1.00 56.35 O
ATOM 11 C2' U B1461 100.284 20.570 2.692 1.00 59.14 C
ATOM 12 O2' U B1461 99.525 21.451 3.495 1.00 67.87 O
ATOM 13 C1' U B1461 100.188 19.191 3.335 1.00 60.49 C
ATOM 14 N1 U B1461 101.299 18.842 4.246 1.00 69.58 N
ATOM 15 C2 U B1461 101.293 19.379 5.530 1.00 68.69 C
ATOM 16 O2 U B1461 100.446 20.158 5.925 1.00 70.28 O
ATOM 17 N3 U B1461 102.321 18.967 6.337 1.00 63.48 N
ATOM 18 C4 U B1461 103.328 18.095 6.015 1.00 70.78 C
ATOM 19 O4 U B1461 104.124 17.740 6.886 1.00 78.45 O
ATOM 20 C5 U B1461 103.288 17.607 4.677 1.00 69.65 C
ATOM 21 C6 U B1461 102.305 17.988 3.857 1.00 69.28 C
ATOM 22 P A B1462 97.534 21.067 -0.078 1.00 60.73 P
ATOM 23 OP1 A B1462 97.799 19.864 -0.901 1.00 56.97 O
ATOM 24 OP2 A B1462 97.616 22.417 -0.691 1.00 53.52 O
ATOM 25 O5' A B1462 96.076 20.910 0.513 1.00 53.10 O
TER

Atoms:
OP1: (110.311,17.228,-9.432)
OP2: (109.421,15.892,-11.446)
C3': (107.955,12.100,-8.364)
C1': (108.686,12.917,-6.265)
C5': (109.403,13.785,-9.640)
O4': (109.540,13.444,-7.266)
C8: (107.680,15.246,-6.332)
O2': (108.629,10.551,-6.543)
C6: (105.722,15.574,-3.440)
C5: (106.524,15.285,-4.555)
C4: (107.056,14.012,-4.635)
P: (109.245,16.387,-10.051)
C4': (109.309,12.769,-8.524)
C2': (107.929,11.740,-6.877)
C2: (106.084,13.401,-2.761)
N1: (105.514,14.589,-2.546)
N3: (106.867,13.010,-3.762)
N6: (105.161,16.774,-3.217)
N7: (106.918,16.051,-5.639)
N9: (107.832,14.003,-5.772)
O5': (108.986,15.076,-9.180)
O3': (107.877,10.954,-9.208)
C4: (103.328,18.095,6.015)
N3: (102.321,18.967,6.337)
OP1: (102.208,17.419,-2.305)
OP2: (103.708,17.432,-0.218)
C2: (101.293,19.379,5.530)
C1': (100.188,19.191,3.335)
C3': (99.662,20.375,1.300)
O5': (101.429,18.358,-0.109)
O4': (100.156,18.272,2.277)
C5': (100.008,18.227,-0.086)
P: (102.363,17.285,-0.831)
C4': (99.462,18.861,1.163)
C2': (100.284,20.570,2.692)
O2': (99.525,21.451,3.495)
N1: (101.299,18.842,4.246)
O4: (104.124,17.740,6.886)
O2: (100.446,20.158,5.925)
C6: (102.305,17.988,3.857)
C5: (103.288,17.607,4.677)
O3': (98.413,21.048,1.264)
Image (generated by PyMOL):
PyMOL image
show in jmol