Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1708:A1703
Extra
PDB:
ATOM 1 O3' A A1707 63.682 -38.653 -4.913 1.00 45.66 O
ATOM 2 P A A1708 62.086 -38.518 -4.767 1.00 35.90 P
ATOM 3 OP1 A A1708 61.751 -38.703 -3.332 1.00 33.71 O
ATOM 4 OP2 A A1708 61.500 -39.441 -5.772 1.00 35.59 O
ATOM 5 O5' A A1708 61.800 -36.993 -5.164 1.00 39.92 O
ATOM 6 C5' A A1708 62.354 -35.928 -4.396 1.00 46.31 C
ATOM 7 C4' A A1708 61.433 -34.730 -4.411 1.00 46.02 C
ATOM 8 O4' A A1708 61.422 -34.239 -5.758 1.00 44.94 O
ATOM 9 C3' A A1708 59.988 -34.963 -3.953 1.00 51.21 C
ATOM 10 O3' A A1708 59.527 -34.015 -2.990 1.00 54.57 O
ATOM 11 C2' A A1708 59.113 -34.482 -5.112 1.00 50.65 C
ATOM 12 O2' A A1708 58.454 -33.261 -4.784 1.00 48.32 O
ATOM 13 C1' A A1708 60.107 -34.215 -6.241 1.00 48.31 C
ATOM 14 N9 A A1708 60.024 -35.033 -7.454 1.00 48.76 N
ATOM 15 C8 A A1708 61.054 -35.706 -8.074 1.00 49.70 C
ATOM 16 N7 A A1708 60.721 -36.222 -9.232 1.00 48.16 N
ATOM 17 C5 A A1708 59.379 -35.896 -9.373 1.00 42.56 C
ATOM 18 C6 A A1708 58.460 -36.119 -10.403 1.00 41.94 C
ATOM 19 N6 A A1708 58.779 -36.697 -11.561 1.00 51.10 N
ATOM 20 N1 A A1708 57.196 -35.702 -10.218 1.00 43.76 N
ATOM 21 C2 A A1708 56.894 -35.077 -9.077 1.00 43.03 C
ATOM 22 N3 A A1708 57.671 -34.776 -8.048 1.00 40.89 N
ATOM 23 C4 A A1708 58.922 -35.214 -8.262 1.00 44.79 C
ATOM 24 P A A1709 60.471 -33.516 -1.801 1.00 53.27 P
ATOM 25 OP1 A A1709 60.616 -34.586 -0.767 1.00 46.87 O
ATOM 26 OP2 A A1709 59.908 -32.197 -1.441 1.00 47.17 O
ATOM 27 O5' A A1709 61.882 -33.207 -2.472 1.00 53.06 O
TER
ATOM 1 O3' U B1702 58.550 -36.128 -15.190 1.00 37.85 O
ATOM 2 P U B1703 57.839 -37.560 -14.958 1.00 47.15 P
ATOM 3 OP1 U B1703 57.189 -37.941 -16.234 1.00 43.17 O
ATOM 4 OP2 U B1703 57.024 -37.526 -13.707 1.00 51.87 O
ATOM 5 O5' U B1703 59.072 -38.530 -14.695 1.00 47.98 O
ATOM 6 C5' U B1703 59.980 -38.847 -15.745 1.00 40.03 C
ATOM 7 C4' U B1703 61.345 -39.198 -15.200 1.00 36.65 C
ATOM 8 O4' U B1703 61.991 -38.020 -14.680 1.00 45.51 O
ATOM 9 C3' U B1703 61.459 -40.179 -14.039 1.00 40.71 C
ATOM 10 O3' U B1703 61.407 -41.531 -14.463 1.00 42.54 O
ATOM 11 C2' U B1703 62.860 -39.905 -13.497 1.00 47.59 C
ATOM 12 O2' U B1703 63.855 -40.702 -14.111 1.00 43.65 O
ATOM 13 C1' U B1703 63.075 -38.440 -13.889 1.00 48.95 C
ATOM 14 N1 U B1703 63.285 -37.511 -12.771 1.00 46.47 N
ATOM 15 C2 U B1703 64.159 -36.481 -12.999 1.00 48.19 C
ATOM 16 O2 U B1703 64.616 -36.232 -14.094 1.00 49.81 O
ATOM 17 N3 U B1703 64.478 -35.730 -11.904 1.00 46.98 N
ATOM 18 C4 U B1703 64.005 -35.884 -10.635 1.00 49.34 C
ATOM 19 O4 U B1703 64.572 -35.291 -9.717 1.00 50.25 O
ATOM 20 C5 U B1703 63.024 -36.920 -10.492 1.00 54.31 C
ATOM 21 C6 U B1703 62.701 -37.678 -11.544 1.00 49.47 C
ATOM 22 P A B1704 60.174 -42.450 -14.024 1.00 44.91 P
ATOM 23 OP1 A B1704 60.015 -42.493 -12.534 1.00 34.94 O
ATOM 24 OP2 A B1704 60.331 -43.710 -14.789 1.00 38.96 O
ATOM 25 O5' A B1704 58.936 -41.682 -14.661 1.00 41.19 O
TER
ATOM 2 P A A1708 62.086 -38.518 -4.767 1.00 35.90 P
ATOM 3 OP1 A A1708 61.751 -38.703 -3.332 1.00 33.71 O
ATOM 4 OP2 A A1708 61.500 -39.441 -5.772 1.00 35.59 O
ATOM 5 O5' A A1708 61.800 -36.993 -5.164 1.00 39.92 O
ATOM 6 C5' A A1708 62.354 -35.928 -4.396 1.00 46.31 C
ATOM 7 C4' A A1708 61.433 -34.730 -4.411 1.00 46.02 C
ATOM 8 O4' A A1708 61.422 -34.239 -5.758 1.00 44.94 O
ATOM 9 C3' A A1708 59.988 -34.963 -3.953 1.00 51.21 C
ATOM 10 O3' A A1708 59.527 -34.015 -2.990 1.00 54.57 O
ATOM 11 C2' A A1708 59.113 -34.482 -5.112 1.00 50.65 C
ATOM 12 O2' A A1708 58.454 -33.261 -4.784 1.00 48.32 O
ATOM 13 C1' A A1708 60.107 -34.215 -6.241 1.00 48.31 C
ATOM 14 N9 A A1708 60.024 -35.033 -7.454 1.00 48.76 N
ATOM 15 C8 A A1708 61.054 -35.706 -8.074 1.00 49.70 C
ATOM 16 N7 A A1708 60.721 -36.222 -9.232 1.00 48.16 N
ATOM 17 C5 A A1708 59.379 -35.896 -9.373 1.00 42.56 C
ATOM 18 C6 A A1708 58.460 -36.119 -10.403 1.00 41.94 C
ATOM 19 N6 A A1708 58.779 -36.697 -11.561 1.00 51.10 N
ATOM 20 N1 A A1708 57.196 -35.702 -10.218 1.00 43.76 N
ATOM 21 C2 A A1708 56.894 -35.077 -9.077 1.00 43.03 C
ATOM 22 N3 A A1708 57.671 -34.776 -8.048 1.00 40.89 N
ATOM 23 C4 A A1708 58.922 -35.214 -8.262 1.00 44.79 C
ATOM 24 P A A1709 60.471 -33.516 -1.801 1.00 53.27 P
ATOM 25 OP1 A A1709 60.616 -34.586 -0.767 1.00 46.87 O
ATOM 26 OP2 A A1709 59.908 -32.197 -1.441 1.00 47.17 O
ATOM 27 O5' A A1709 61.882 -33.207 -2.472 1.00 53.06 O
TER
ATOM 1 O3' U B1702 58.550 -36.128 -15.190 1.00 37.85 O
ATOM 2 P U B1703 57.839 -37.560 -14.958 1.00 47.15 P
ATOM 3 OP1 U B1703 57.189 -37.941 -16.234 1.00 43.17 O
ATOM 4 OP2 U B1703 57.024 -37.526 -13.707 1.00 51.87 O
ATOM 5 O5' U B1703 59.072 -38.530 -14.695 1.00 47.98 O
ATOM 6 C5' U B1703 59.980 -38.847 -15.745 1.00 40.03 C
ATOM 7 C4' U B1703 61.345 -39.198 -15.200 1.00 36.65 C
ATOM 8 O4' U B1703 61.991 -38.020 -14.680 1.00 45.51 O
ATOM 9 C3' U B1703 61.459 -40.179 -14.039 1.00 40.71 C
ATOM 10 O3' U B1703 61.407 -41.531 -14.463 1.00 42.54 O
ATOM 11 C2' U B1703 62.860 -39.905 -13.497 1.00 47.59 C
ATOM 12 O2' U B1703 63.855 -40.702 -14.111 1.00 43.65 O
ATOM 13 C1' U B1703 63.075 -38.440 -13.889 1.00 48.95 C
ATOM 14 N1 U B1703 63.285 -37.511 -12.771 1.00 46.47 N
ATOM 15 C2 U B1703 64.159 -36.481 -12.999 1.00 48.19 C
ATOM 16 O2 U B1703 64.616 -36.232 -14.094 1.00 49.81 O
ATOM 17 N3 U B1703 64.478 -35.730 -11.904 1.00 46.98 N
ATOM 18 C4 U B1703 64.005 -35.884 -10.635 1.00 49.34 C
ATOM 19 O4 U B1703 64.572 -35.291 -9.717 1.00 50.25 O
ATOM 20 C5 U B1703 63.024 -36.920 -10.492 1.00 54.31 C
ATOM 21 C6 U B1703 62.701 -37.678 -11.544 1.00 49.47 C
ATOM 22 P A B1704 60.174 -42.450 -14.024 1.00 44.91 P
ATOM 23 OP1 A B1704 60.015 -42.493 -12.534 1.00 34.94 O
ATOM 24 OP2 A B1704 60.331 -43.710 -14.789 1.00 38.96 O
ATOM 25 O5' A B1704 58.936 -41.682 -14.661 1.00 41.19 O
TER
Atoms:
OP1: (61.751,-38.703,-3.332)
OP2: (61.500,-39.441,-5.772)
C3': (59.988,-34.963,-3.953)
C1': (60.107,-34.215,-6.241)
C5': (62.354,-35.928,-4.396)
O4': (61.422,-34.239,-5.758)
C8: (61.054,-35.706,-8.074)
O2': (58.454,-33.261,-4.784)
C6: (58.460,-36.119,-10.403)
C5: (59.379,-35.896,-9.373)
C4: (58.922,-35.214,-8.262)
P: (62.086,-38.518,-4.767)
C4': (61.433,-34.730,-4.411)
C2': (59.113,-34.482,-5.112)
C2: (56.894,-35.077,-9.077)
N1: (57.196,-35.702,-10.218)
N3: (57.671,-34.776,-8.048)
N6: (58.779,-36.697,-11.561)
N7: (60.721,-36.222,-9.232)
N9: (60.024,-35.033,-7.454)
O5': (61.800,-36.993,-5.164)
O3': (59.527,-34.015,-2.990)
OP2: (61.500,-39.441,-5.772)
C3': (59.988,-34.963,-3.953)
C1': (60.107,-34.215,-6.241)
C5': (62.354,-35.928,-4.396)
O4': (61.422,-34.239,-5.758)
C8: (61.054,-35.706,-8.074)
O2': (58.454,-33.261,-4.784)
C6: (58.460,-36.119,-10.403)
C5: (59.379,-35.896,-9.373)
C4: (58.922,-35.214,-8.262)
P: (62.086,-38.518,-4.767)
C4': (61.433,-34.730,-4.411)
C2': (59.113,-34.482,-5.112)
C2: (56.894,-35.077,-9.077)
N1: (57.196,-35.702,-10.218)
N3: (57.671,-34.776,-8.048)
N6: (58.779,-36.697,-11.561)
N7: (60.721,-36.222,-9.232)
N9: (60.024,-35.033,-7.454)
O5': (61.800,-36.993,-5.164)
O3': (59.527,-34.015,-2.990)
C4: (64.005,-35.884,-10.635)
N3: (64.478,-35.730,-11.904)
OP1: (57.189,-37.941,-16.234)
OP2: (57.024,-37.526,-13.707)
C2: (64.159,-36.481,-12.999)
C1': (63.075,-38.440,-13.889)
C3': (61.459,-40.179,-14.039)
O5': (59.072,-38.530,-14.695)
O4': (61.991,-38.020,-14.680)
C5': (59.980,-38.847,-15.745)
P: (57.839,-37.560,-14.958)
C4': (61.345,-39.198,-15.200)
C2': (62.860,-39.905,-13.497)
O2': (63.855,-40.702,-14.111)
N1: (63.285,-37.511,-12.771)
O4: (64.572,-35.291,-9.717)
O2: (64.616,-36.232,-14.094)
C6: (62.701,-37.678,-11.544)
C5: (63.024,-36.920,-10.492)
O3': (61.407,-41.531,-14.463)
N3: (64.478,-35.730,-11.904)
OP1: (57.189,-37.941,-16.234)
OP2: (57.024,-37.526,-13.707)
C2: (64.159,-36.481,-12.999)
C1': (63.075,-38.440,-13.889)
C3': (61.459,-40.179,-14.039)
O5': (59.072,-38.530,-14.695)
O4': (61.991,-38.020,-14.680)
C5': (59.980,-38.847,-15.745)
P: (57.839,-37.560,-14.958)
C4': (61.345,-39.198,-15.200)
C2': (62.860,-39.905,-13.497)
O2': (63.855,-40.702,-14.111)
N1: (63.285,-37.511,-12.771)
O4: (64.572,-35.291,-9.717)
O2: (64.616,-36.232,-14.094)
C6: (62.701,-37.678,-11.544)
C5: (63.024,-36.920,-10.492)
O3': (61.407,-41.531,-14.463)
Image (generated by PyMOL):