Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2619:A2593
Extra
PDB:
ATOM 1 O3' A A2618 39.913 -59.850 17.298 1.00 43.68 O
ATOM 2 P A A2619 39.345 -59.484 18.741 1.00 46.06 P
ATOM 3 OP1 A A2619 39.558 -60.697 19.584 1.00 44.27 O
ATOM 4 OP2 A A2619 37.976 -58.911 18.568 1.00 50.23 O
ATOM 5 O5' A A2619 40.246 -58.295 19.264 1.00 43.85 O
ATOM 6 C5' A A2619 39.667 -57.031 19.419 1.00 39.95 C
ATOM 7 C4' A A2619 38.688 -57.079 20.544 1.00 40.83 C
ATOM 8 O4' A A2619 39.375 -57.459 21.740 1.00 46.99 O
ATOM 9 C3' A A2619 38.015 -55.753 20.778 1.00 44.45 C
ATOM 10 O3' A A2619 36.825 -55.924 19.987 1.00 48.36 O
ATOM 11 C2' A A2619 37.880 -55.679 22.300 1.00 43.54 C
ATOM 12 O2' A A2619 36.680 -56.239 22.731 1.00 39.99 O
ATOM 13 C1' A A2619 39.032 -56.581 22.780 1.00 48.91 C
ATOM 14 N9 A A2619 40.286 -55.981 23.218 1.00 53.96 N
ATOM 15 C8 A A2619 41.183 -55.227 22.491 1.00 54.67 C
ATOM 16 N7 A A2619 42.292 -54.963 23.134 1.00 45.72 N
ATOM 17 C5 A A2619 42.100 -55.548 24.368 1.00 49.21 C
ATOM 18 C6 A A2619 42.901 -55.627 25.484 1.00 58.34 C
ATOM 19 N6 A A2619 44.135 -55.107 25.521 1.00 68.08 N
ATOM 20 N1 A A2619 42.415 -56.270 26.569 1.00 63.61 N
ATOM 21 C2 A A2619 41.189 -56.809 26.494 1.00 62.31 C
ATOM 22 N3 A A2619 40.338 -56.814 25.482 1.00 48.41 N
ATOM 23 C4 A A2619 40.859 -56.156 24.442 1.00 50.07 C
ATOM 24 P G A2620 35.506 -55.041 20.221 1.00 36.65 P
ATOM 25 OP1 G A2620 34.799 -55.498 21.431 1.00 35.46 O
ATOM 26 OP2 G A2620 34.832 -55.131 18.892 1.00 34.53 O
ATOM 27 O5' G A2620 35.989 -53.527 20.429 1.00 40.30 O
TER
ATOM 1 O3' U B2592 48.208 -57.162 28.972 1.00 46.93 O
ATOM 2 P U B2593 46.601 -56.988 28.977 1.00 38.13 P
ATOM 3 OP1 U B2593 46.185 -56.871 27.552 1.00 43.90 O
ATOM 4 OP2 U B2593 46.210 -55.910 29.945 1.00 38.91 O
ATOM 5 O5' U B2593 46.064 -58.394 29.516 1.00 42.43 O
ATOM 6 C5' U B2593 46.165 -59.579 28.716 1.00 39.05 C
ATOM 7 C4' U B2593 45.833 -60.814 29.531 1.00 40.74 C
ATOM 8 O4' U B2593 46.745 -60.911 30.649 1.00 42.26 O
ATOM 9 C3' U B2593 44.449 -60.900 30.160 1.00 38.29 C
ATOM 10 O3' U B2593 43.516 -61.451 29.245 1.00 38.61 O
ATOM 11 C2' U B2593 44.678 -61.858 31.321 1.00 40.40 C
ATOM 12 O2' U B2593 44.695 -63.208 30.895 1.00 40.67 O
ATOM 13 C1' U B2593 46.087 -61.474 31.766 1.00 42.19 C
ATOM 14 N1 U B2593 46.098 -60.481 32.847 1.00 44.40 N
ATOM 15 C2 U B2593 46.108 -60.926 34.166 1.00 46.43 C
ATOM 16 O2 U B2593 46.106 -62.116 34.468 1.00 46.11 O
ATOM 17 N3 U B2593 46.106 -59.921 35.113 1.00 45.11 N
ATOM 18 C4 U B2593 46.076 -58.547 34.875 1.00 40.85 C
ATOM 19 O4 U B2593 45.983 -57.761 35.817 1.00 37.62 O
ATOM 20 C5 U B2593 46.073 -58.183 33.497 1.00 41.57 C
ATOM 21 C6 U B2593 46.088 -59.133 32.557 1.00 45.26 C
ATOM 22 P U B2594 41.976 -60.991 29.286 1.00 41.20 P
ATOM 23 OP1 U B2594 41.857 -59.586 29.758 1.00 42.22 O
ATOM 24 OP2 U B2594 41.264 -62.073 30.011 1.00 39.13 O
ATOM 25 O5' U B2594 41.567 -61.018 27.738 1.00 46.73 O
TER
ATOM 2 P A A2619 39.345 -59.484 18.741 1.00 46.06 P
ATOM 3 OP1 A A2619 39.558 -60.697 19.584 1.00 44.27 O
ATOM 4 OP2 A A2619 37.976 -58.911 18.568 1.00 50.23 O
ATOM 5 O5' A A2619 40.246 -58.295 19.264 1.00 43.85 O
ATOM 6 C5' A A2619 39.667 -57.031 19.419 1.00 39.95 C
ATOM 7 C4' A A2619 38.688 -57.079 20.544 1.00 40.83 C
ATOM 8 O4' A A2619 39.375 -57.459 21.740 1.00 46.99 O
ATOM 9 C3' A A2619 38.015 -55.753 20.778 1.00 44.45 C
ATOM 10 O3' A A2619 36.825 -55.924 19.987 1.00 48.36 O
ATOM 11 C2' A A2619 37.880 -55.679 22.300 1.00 43.54 C
ATOM 12 O2' A A2619 36.680 -56.239 22.731 1.00 39.99 O
ATOM 13 C1' A A2619 39.032 -56.581 22.780 1.00 48.91 C
ATOM 14 N9 A A2619 40.286 -55.981 23.218 1.00 53.96 N
ATOM 15 C8 A A2619 41.183 -55.227 22.491 1.00 54.67 C
ATOM 16 N7 A A2619 42.292 -54.963 23.134 1.00 45.72 N
ATOM 17 C5 A A2619 42.100 -55.548 24.368 1.00 49.21 C
ATOM 18 C6 A A2619 42.901 -55.627 25.484 1.00 58.34 C
ATOM 19 N6 A A2619 44.135 -55.107 25.521 1.00 68.08 N
ATOM 20 N1 A A2619 42.415 -56.270 26.569 1.00 63.61 N
ATOM 21 C2 A A2619 41.189 -56.809 26.494 1.00 62.31 C
ATOM 22 N3 A A2619 40.338 -56.814 25.482 1.00 48.41 N
ATOM 23 C4 A A2619 40.859 -56.156 24.442 1.00 50.07 C
ATOM 24 P G A2620 35.506 -55.041 20.221 1.00 36.65 P
ATOM 25 OP1 G A2620 34.799 -55.498 21.431 1.00 35.46 O
ATOM 26 OP2 G A2620 34.832 -55.131 18.892 1.00 34.53 O
ATOM 27 O5' G A2620 35.989 -53.527 20.429 1.00 40.30 O
TER
ATOM 1 O3' U B2592 48.208 -57.162 28.972 1.00 46.93 O
ATOM 2 P U B2593 46.601 -56.988 28.977 1.00 38.13 P
ATOM 3 OP1 U B2593 46.185 -56.871 27.552 1.00 43.90 O
ATOM 4 OP2 U B2593 46.210 -55.910 29.945 1.00 38.91 O
ATOM 5 O5' U B2593 46.064 -58.394 29.516 1.00 42.43 O
ATOM 6 C5' U B2593 46.165 -59.579 28.716 1.00 39.05 C
ATOM 7 C4' U B2593 45.833 -60.814 29.531 1.00 40.74 C
ATOM 8 O4' U B2593 46.745 -60.911 30.649 1.00 42.26 O
ATOM 9 C3' U B2593 44.449 -60.900 30.160 1.00 38.29 C
ATOM 10 O3' U B2593 43.516 -61.451 29.245 1.00 38.61 O
ATOM 11 C2' U B2593 44.678 -61.858 31.321 1.00 40.40 C
ATOM 12 O2' U B2593 44.695 -63.208 30.895 1.00 40.67 O
ATOM 13 C1' U B2593 46.087 -61.474 31.766 1.00 42.19 C
ATOM 14 N1 U B2593 46.098 -60.481 32.847 1.00 44.40 N
ATOM 15 C2 U B2593 46.108 -60.926 34.166 1.00 46.43 C
ATOM 16 O2 U B2593 46.106 -62.116 34.468 1.00 46.11 O
ATOM 17 N3 U B2593 46.106 -59.921 35.113 1.00 45.11 N
ATOM 18 C4 U B2593 46.076 -58.547 34.875 1.00 40.85 C
ATOM 19 O4 U B2593 45.983 -57.761 35.817 1.00 37.62 O
ATOM 20 C5 U B2593 46.073 -58.183 33.497 1.00 41.57 C
ATOM 21 C6 U B2593 46.088 -59.133 32.557 1.00 45.26 C
ATOM 22 P U B2594 41.976 -60.991 29.286 1.00 41.20 P
ATOM 23 OP1 U B2594 41.857 -59.586 29.758 1.00 42.22 O
ATOM 24 OP2 U B2594 41.264 -62.073 30.011 1.00 39.13 O
ATOM 25 O5' U B2594 41.567 -61.018 27.738 1.00 46.73 O
TER
Atoms:
OP1: (39.558,-60.697,19.584)
OP2: (37.976,-58.911,18.568)
C3': (38.015,-55.753,20.778)
C1': (39.032,-56.581,22.780)
C5': (39.667,-57.031,19.419)
O4': (39.375,-57.459,21.740)
C8: (41.183,-55.227,22.491)
O2': (36.680,-56.239,22.731)
C6: (42.901,-55.627,25.484)
C5: (42.100,-55.548,24.368)
C4: (40.859,-56.156,24.442)
P: (39.345,-59.484,18.741)
C4': (38.688,-57.079,20.544)
C2': (37.880,-55.679,22.300)
C2: (41.189,-56.809,26.494)
N1: (42.415,-56.270,26.569)
N3: (40.338,-56.814,25.482)
N6: (44.135,-55.107,25.521)
N7: (42.292,-54.963,23.134)
N9: (40.286,-55.981,23.218)
O5': (40.246,-58.295,19.264)
O3': (36.825,-55.924,19.987)
OP2: (37.976,-58.911,18.568)
C3': (38.015,-55.753,20.778)
C1': (39.032,-56.581,22.780)
C5': (39.667,-57.031,19.419)
O4': (39.375,-57.459,21.740)
C8: (41.183,-55.227,22.491)
O2': (36.680,-56.239,22.731)
C6: (42.901,-55.627,25.484)
C5: (42.100,-55.548,24.368)
C4: (40.859,-56.156,24.442)
P: (39.345,-59.484,18.741)
C4': (38.688,-57.079,20.544)
C2': (37.880,-55.679,22.300)
C2: (41.189,-56.809,26.494)
N1: (42.415,-56.270,26.569)
N3: (40.338,-56.814,25.482)
N6: (44.135,-55.107,25.521)
N7: (42.292,-54.963,23.134)
N9: (40.286,-55.981,23.218)
O5': (40.246,-58.295,19.264)
O3': (36.825,-55.924,19.987)
C4: (46.076,-58.547,34.875)
N3: (46.106,-59.921,35.113)
OP1: (46.185,-56.871,27.552)
OP2: (46.210,-55.910,29.945)
C2: (46.108,-60.926,34.166)
C1': (46.087,-61.474,31.766)
C3': (44.449,-60.900,30.160)
O5': (46.064,-58.394,29.516)
O4': (46.745,-60.911,30.649)
C5': (46.165,-59.579,28.716)
P: (46.601,-56.988,28.977)
C4': (45.833,-60.814,29.531)
C2': (44.678,-61.858,31.321)
O2': (44.695,-63.208,30.895)
N1: (46.098,-60.481,32.847)
O4: (45.983,-57.761,35.817)
O2: (46.106,-62.116,34.468)
C6: (46.088,-59.133,32.557)
C5: (46.073,-58.183,33.497)
O3': (43.516,-61.451,29.245)
N3: (46.106,-59.921,35.113)
OP1: (46.185,-56.871,27.552)
OP2: (46.210,-55.910,29.945)
C2: (46.108,-60.926,34.166)
C1': (46.087,-61.474,31.766)
C3': (44.449,-60.900,30.160)
O5': (46.064,-58.394,29.516)
O4': (46.745,-60.911,30.649)
C5': (46.165,-59.579,28.716)
P: (46.601,-56.988,28.977)
C4': (45.833,-60.814,29.531)
C2': (44.678,-61.858,31.321)
O2': (44.695,-63.208,30.895)
N1: (46.098,-60.481,32.847)
O4: (45.983,-57.761,35.817)
O2: (46.106,-62.116,34.468)
C6: (46.088,-59.133,32.557)
C5: (46.073,-58.183,33.497)
O3': (43.516,-61.451,29.245)
Image (generated by PyMOL):