Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1706:A1738
Extra
PDB:
ATOM 1 O3' U A1705 -3.047 -11.734 -31.142 1.00 16.14 O
ATOM 2 P A A1706 -2.546 -11.221 -29.706 1.00 28.66 P
ATOM 3 OP1 A A1706 -3.741 -11.187 -28.802 1.00 28.66 O
ATOM 4 OP2 A A1706 -1.794 -9.966 -29.946 1.00 28.66 O
ATOM 5 O5' A A1706 -1.544 -12.376 -29.246 1.00 28.66 O
ATOM 6 C5' A A1706 -0.868 -12.309 -27.994 1.00 28.66 C
ATOM 7 C4' A A1706 -0.811 -13.661 -27.299 1.00 28.66 C
ATOM 8 O4' A A1706 -2.076 -13.916 -26.627 1.00 28.66 O
ATOM 9 C3' A A1706 -0.600 -14.865 -28.201 1.00 28.66 C
ATOM 10 O3' A A1706 -0.057 -15.922 -27.417 1.00 28.66 O
ATOM 11 C2' A A1706 -2.025 -15.216 -28.552 1.00 28.66 C
ATOM 12 O2' A A1706 -2.198 -16.495 -29.088 1.00 28.66 O
ATOM 13 C1' A A1706 -2.664 -15.075 -27.184 1.00 28.66 C
ATOM 14 N9 A A1706 -4.096 -14.874 -27.214 1.00 29.27 N
ATOM 15 C8 A A1706 -4.791 -13.890 -27.868 1.00 29.27 C
ATOM 16 N7 A A1706 -6.081 -13.966 -27.677 1.00 29.27 N
ATOM 17 C5 A A1706 -6.215 -15.064 -26.831 1.00 29.27 C
ATOM 18 C6 A A1706 -7.333 -15.660 -26.254 1.00 29.27 C
ATOM 19 N6 A A1706 -8.570 -15.204 -26.479 1.00 29.27 N
ATOM 20 N1 A A1706 -7.114 -16.737 -25.464 1.00 29.27 N
ATOM 21 C2 A A1706 -5.863 -17.173 -25.272 1.00 29.27 C
ATOM 22 N3 A A1706 -4.728 -16.689 -25.760 1.00 29.27 N
ATOM 23 C4 A A1706 -4.993 -15.632 -26.536 1.00 29.27 C
ATOM 24 P U A1707 1.349 -16.570 -27.793 1.00 51.30 P
ATOM 25 OP1 U A1707 1.958 -17.050 -26.534 1.00 51.30 O
ATOM 26 OP2 U A1707 2.078 -15.573 -28.620 1.00 51.30 O
ATOM 27 O5' U A1707 0.937 -17.808 -28.672 1.00 51.30 O
TER
ATOM 1 O3' A B1737 -14.795 -20.678 -18.753 1.00 19.55 O
ATOM 2 P A B1738 -15.095 -21.247 -20.226 1.00 24.82 P
ATOM 3 OP1 A B1738 -16.009 -22.393 -20.067 1.00 24.82 O
ATOM 4 OP2 A B1738 -13.784 -21.472 -20.894 1.00 24.82 O
ATOM 5 O5' A B1738 -15.857 -20.033 -20.922 1.00 24.82 O
ATOM 6 C5' A B1738 -16.695 -19.169 -20.173 1.00 24.82 C
ATOM 7 C4' A B1738 -16.467 -17.725 -20.547 1.00 24.82 C
ATOM 8 O4' A B1738 -15.176 -17.290 -20.064 1.00 24.82 O
ATOM 9 C3' A B1738 -16.400 -17.407 -22.032 1.00 24.82 C
ATOM 10 O3' A B1738 -17.658 -17.370 -22.661 1.00 24.82 O
ATOM 11 C2' A B1738 -15.686 -16.073 -22.028 1.00 24.82 C
ATOM 12 O2' A B1738 -16.551 -15.035 -21.600 1.00 24.82 O
ATOM 13 C1' A B1738 -14.648 -16.320 -20.943 1.00 24.82 C
ATOM 14 N9 A B1738 -13.394 -16.832 -21.503 1.00 24.92 N
ATOM 15 C8 A B1738 -12.765 -18.041 -21.341 1.00 24.92 C
ATOM 16 N7 A B1738 -11.640 -18.140 -22.011 1.00 24.92 N
ATOM 17 C5 A B1738 -11.545 -16.898 -22.657 1.00 24.92 C
ATOM 18 C6 A B1738 -10.609 -16.321 -23.528 1.00 24.92 C
ATOM 19 N6 A B1738 -9.510 -16.936 -23.926 1.00 24.92 N
ATOM 20 N1 A B1738 -10.818 -15.075 -23.984 1.00 24.92 N
ATOM 21 C2 A B1738 -11.905 -14.422 -23.595 1.00 24.92 C
ATOM 22 N3 A B1738 -12.861 -14.842 -22.785 1.00 24.92 N
ATOM 23 C4 A B1738 -12.616 -16.093 -22.347 1.00 24.92 C
ATOM 24 P A B1739 -17.831 -18.009 -24.121 1.00 20.94 P
ATOM 25 OP1 A B1739 -19.247 -18.370 -24.260 1.00 20.94 O
ATOM 26 OP2 A B1739 -16.812 -19.071 -24.264 1.00 20.94 O
ATOM 27 O5' A B1739 -17.485 -16.795 -25.080 1.00 20.94 O
TER
ATOM 2 P A A1706 -2.546 -11.221 -29.706 1.00 28.66 P
ATOM 3 OP1 A A1706 -3.741 -11.187 -28.802 1.00 28.66 O
ATOM 4 OP2 A A1706 -1.794 -9.966 -29.946 1.00 28.66 O
ATOM 5 O5' A A1706 -1.544 -12.376 -29.246 1.00 28.66 O
ATOM 6 C5' A A1706 -0.868 -12.309 -27.994 1.00 28.66 C
ATOM 7 C4' A A1706 -0.811 -13.661 -27.299 1.00 28.66 C
ATOM 8 O4' A A1706 -2.076 -13.916 -26.627 1.00 28.66 O
ATOM 9 C3' A A1706 -0.600 -14.865 -28.201 1.00 28.66 C
ATOM 10 O3' A A1706 -0.057 -15.922 -27.417 1.00 28.66 O
ATOM 11 C2' A A1706 -2.025 -15.216 -28.552 1.00 28.66 C
ATOM 12 O2' A A1706 -2.198 -16.495 -29.088 1.00 28.66 O
ATOM 13 C1' A A1706 -2.664 -15.075 -27.184 1.00 28.66 C
ATOM 14 N9 A A1706 -4.096 -14.874 -27.214 1.00 29.27 N
ATOM 15 C8 A A1706 -4.791 -13.890 -27.868 1.00 29.27 C
ATOM 16 N7 A A1706 -6.081 -13.966 -27.677 1.00 29.27 N
ATOM 17 C5 A A1706 -6.215 -15.064 -26.831 1.00 29.27 C
ATOM 18 C6 A A1706 -7.333 -15.660 -26.254 1.00 29.27 C
ATOM 19 N6 A A1706 -8.570 -15.204 -26.479 1.00 29.27 N
ATOM 20 N1 A A1706 -7.114 -16.737 -25.464 1.00 29.27 N
ATOM 21 C2 A A1706 -5.863 -17.173 -25.272 1.00 29.27 C
ATOM 22 N3 A A1706 -4.728 -16.689 -25.760 1.00 29.27 N
ATOM 23 C4 A A1706 -4.993 -15.632 -26.536 1.00 29.27 C
ATOM 24 P U A1707 1.349 -16.570 -27.793 1.00 51.30 P
ATOM 25 OP1 U A1707 1.958 -17.050 -26.534 1.00 51.30 O
ATOM 26 OP2 U A1707 2.078 -15.573 -28.620 1.00 51.30 O
ATOM 27 O5' U A1707 0.937 -17.808 -28.672 1.00 51.30 O
TER
ATOM 1 O3' A B1737 -14.795 -20.678 -18.753 1.00 19.55 O
ATOM 2 P A B1738 -15.095 -21.247 -20.226 1.00 24.82 P
ATOM 3 OP1 A B1738 -16.009 -22.393 -20.067 1.00 24.82 O
ATOM 4 OP2 A B1738 -13.784 -21.472 -20.894 1.00 24.82 O
ATOM 5 O5' A B1738 -15.857 -20.033 -20.922 1.00 24.82 O
ATOM 6 C5' A B1738 -16.695 -19.169 -20.173 1.00 24.82 C
ATOM 7 C4' A B1738 -16.467 -17.725 -20.547 1.00 24.82 C
ATOM 8 O4' A B1738 -15.176 -17.290 -20.064 1.00 24.82 O
ATOM 9 C3' A B1738 -16.400 -17.407 -22.032 1.00 24.82 C
ATOM 10 O3' A B1738 -17.658 -17.370 -22.661 1.00 24.82 O
ATOM 11 C2' A B1738 -15.686 -16.073 -22.028 1.00 24.82 C
ATOM 12 O2' A B1738 -16.551 -15.035 -21.600 1.00 24.82 O
ATOM 13 C1' A B1738 -14.648 -16.320 -20.943 1.00 24.82 C
ATOM 14 N9 A B1738 -13.394 -16.832 -21.503 1.00 24.92 N
ATOM 15 C8 A B1738 -12.765 -18.041 -21.341 1.00 24.92 C
ATOM 16 N7 A B1738 -11.640 -18.140 -22.011 1.00 24.92 N
ATOM 17 C5 A B1738 -11.545 -16.898 -22.657 1.00 24.92 C
ATOM 18 C6 A B1738 -10.609 -16.321 -23.528 1.00 24.92 C
ATOM 19 N6 A B1738 -9.510 -16.936 -23.926 1.00 24.92 N
ATOM 20 N1 A B1738 -10.818 -15.075 -23.984 1.00 24.92 N
ATOM 21 C2 A B1738 -11.905 -14.422 -23.595 1.00 24.92 C
ATOM 22 N3 A B1738 -12.861 -14.842 -22.785 1.00 24.92 N
ATOM 23 C4 A B1738 -12.616 -16.093 -22.347 1.00 24.92 C
ATOM 24 P A B1739 -17.831 -18.009 -24.121 1.00 20.94 P
ATOM 25 OP1 A B1739 -19.247 -18.370 -24.260 1.00 20.94 O
ATOM 26 OP2 A B1739 -16.812 -19.071 -24.264 1.00 20.94 O
ATOM 27 O5' A B1739 -17.485 -16.795 -25.080 1.00 20.94 O
TER
Atoms:
OP1: (-3.741,-11.187,-28.802)
OP2: (-1.794,-9.966,-29.946)
C3': (-0.600,-14.865,-28.201)
C1': (-2.664,-15.075,-27.184)
C5': (-0.868,-12.309,-27.994)
O4': (-2.076,-13.916,-26.627)
C8: (-4.791,-13.890,-27.868)
O2': (-2.198,-16.495,-29.088)
C6: (-7.333,-15.660,-26.254)
C5: (-6.215,-15.064,-26.831)
C4: (-4.993,-15.632,-26.536)
P: (-2.546,-11.221,-29.706)
C4': (-0.811,-13.661,-27.299)
C2': (-2.025,-15.216,-28.552)
C2: (-5.863,-17.173,-25.272)
N1: (-7.114,-16.737,-25.464)
N3: (-4.728,-16.689,-25.760)
N6: (-8.570,-15.204,-26.479)
N7: (-6.081,-13.966,-27.677)
N9: (-4.096,-14.874,-27.214)
O5': (-1.544,-12.376,-29.246)
O3': (-0.057,-15.922,-27.417)
OP2: (-1.794,-9.966,-29.946)
C3': (-0.600,-14.865,-28.201)
C1': (-2.664,-15.075,-27.184)
C5': (-0.868,-12.309,-27.994)
O4': (-2.076,-13.916,-26.627)
C8: (-4.791,-13.890,-27.868)
O2': (-2.198,-16.495,-29.088)
C6: (-7.333,-15.660,-26.254)
C5: (-6.215,-15.064,-26.831)
C4: (-4.993,-15.632,-26.536)
P: (-2.546,-11.221,-29.706)
C4': (-0.811,-13.661,-27.299)
C2': (-2.025,-15.216,-28.552)
C2: (-5.863,-17.173,-25.272)
N1: (-7.114,-16.737,-25.464)
N3: (-4.728,-16.689,-25.760)
N6: (-8.570,-15.204,-26.479)
N7: (-6.081,-13.966,-27.677)
N9: (-4.096,-14.874,-27.214)
O5': (-1.544,-12.376,-29.246)
O3': (-0.057,-15.922,-27.417)
OP1: (-16.009,-22.393,-20.067)
OP2: (-13.784,-21.472,-20.894)
C3': (-16.400,-17.407,-22.032)
C1': (-14.648,-16.320,-20.943)
C5': (-16.695,-19.169,-20.173)
O4': (-15.176,-17.290,-20.064)
C8: (-12.765,-18.041,-21.341)
O2': (-16.551,-15.035,-21.600)
C6: (-10.609,-16.321,-23.528)
C5: (-11.545,-16.898,-22.657)
C4: (-12.616,-16.093,-22.347)
P: (-15.095,-21.247,-20.226)
C4': (-16.467,-17.725,-20.547)
C2': (-15.686,-16.073,-22.028)
C2: (-11.905,-14.422,-23.595)
N1: (-10.818,-15.075,-23.984)
N3: (-12.861,-14.842,-22.785)
N6: (-9.510,-16.936,-23.926)
N7: (-11.640,-18.140,-22.011)
N9: (-13.394,-16.832,-21.503)
O5': (-15.857,-20.033,-20.922)
O3': (-17.658,-17.370,-22.661)
OP2: (-13.784,-21.472,-20.894)
C3': (-16.400,-17.407,-22.032)
C1': (-14.648,-16.320,-20.943)
C5': (-16.695,-19.169,-20.173)
O4': (-15.176,-17.290,-20.064)
C8: (-12.765,-18.041,-21.341)
O2': (-16.551,-15.035,-21.600)
C6: (-10.609,-16.321,-23.528)
C5: (-11.545,-16.898,-22.657)
C4: (-12.616,-16.093,-22.347)
P: (-15.095,-21.247,-20.226)
C4': (-16.467,-17.725,-20.547)
C2': (-15.686,-16.073,-22.028)
C2: (-11.905,-14.422,-23.595)
N1: (-10.818,-15.075,-23.984)
N3: (-12.861,-14.842,-22.785)
N6: (-9.510,-16.936,-23.926)
N7: (-11.640,-18.140,-22.011)
N9: (-13.394,-16.832,-21.503)
O5': (-15.857,-20.033,-20.922)
O3': (-17.658,-17.370,-22.661)
Image (generated by PyMOL):