Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A580:A2405
Extra
PDB:
ATOM 1 O3' G A 579 98.207 -78.059 -15.540 1.00 39.25 O
ATOM 2 P A A 580 96.842 -78.616 -16.186 1.00 40.86 P
ATOM 3 OP1 A A 580 97.231 -79.508 -17.312 1.00 37.32 O
ATOM 4 OP2 A A 580 95.982 -77.450 -16.460 1.00 38.71 O
ATOM 5 O5' A A 580 96.143 -79.487 -15.031 1.00 36.29 O
ATOM 6 C5' A A 580 95.804 -78.911 -13.747 1.00 42.77 C
ATOM 7 C4' A A 580 94.366 -79.254 -13.318 1.00 42.11 C
ATOM 8 O4' A A 580 93.876 -78.056 -12.675 1.00 38.33 O
ATOM 9 C3' A A 580 93.379 -79.548 -14.451 1.00 39.34 C
ATOM 10 O3' A A 580 93.042 -80.943 -14.644 1.00 39.51 O
ATOM 11 C2' A A 580 92.084 -78.876 -14.023 1.00 38.70 C
ATOM 12 O2' A A 580 91.269 -79.775 -13.332 1.00 56.13 O
ATOM 13 C1' A A 580 92.543 -77.815 -13.030 1.00 35.21 C
ATOM 14 N9 A A 580 92.357 -76.394 -13.364 1.00 36.20 N
ATOM 15 C8 A A 580 92.205 -75.797 -14.598 1.00 34.25 C
ATOM 16 N7 A A 580 91.988 -74.497 -14.538 1.00 27.37 N
ATOM 17 C5 A A 580 92.008 -74.217 -13.173 1.00 31.20 C
ATOM 18 C6 A A 580 91.833 -73.007 -12.436 1.00 35.90 C
ATOM 19 N6 A A 580 91.607 -71.820 -12.998 1.00 35.72 N
ATOM 20 N1 A A 580 91.909 -73.071 -11.087 1.00 34.77 N
ATOM 21 C2 A A 580 92.166 -74.258 -10.519 1.00 36.59 C
ATOM 22 N3 A A 580 92.357 -75.459 -11.095 1.00 36.52 N
ATOM 23 C4 A A 580 92.255 -75.370 -12.439 1.00 33.38 C
ATOM 24 P A A 581 93.243 -82.046 -13.467 1.00 41.00 P
ATOM 25 OP1 A A 581 94.369 -81.703 -12.567 1.00 39.68 O
ATOM 26 OP2 A A 581 93.146 -83.403 -14.065 1.00 42.16 O
ATOM 27 O5' A A 581 91.923 -82.012 -12.588 1.00 43.02 O
TER
ATOM 1 O3' C B2404 91.950 -69.476 -11.747 1.00 37.47 O
ATOM 2 P U B2405 91.342 -68.407 -12.800 1.00 48.20 P
ATOM 3 OP1 U B2405 90.735 -69.203 -13.908 1.00 35.08 O
ATOM 4 OP2 U B2405 92.419 -67.410 -13.106 1.00 38.37 O
ATOM 5 O5' U B2405 90.162 -67.706 -11.977 1.00 46.21 O
ATOM 6 C5' U B2405 89.103 -68.493 -11.442 1.00 42.00 C
ATOM 7 C4' U B2405 88.186 -67.647 -10.600 1.00 41.67 C
ATOM 8 O4' U B2405 88.885 -67.184 -9.419 1.00 41.46 O
ATOM 9 C3' U B2405 87.625 -66.381 -11.222 1.00 37.69 C
ATOM 10 O3' U B2405 86.515 -66.624 -12.065 1.00 41.62 O
ATOM 11 C2' U B2405 87.219 -65.573 -10.000 1.00 36.75 C
ATOM 12 O2' U B2405 85.955 -65.961 -9.507 1.00 31.82 O
ATOM 13 C1' U B2405 88.307 -65.961 -8.994 1.00 40.53 C
ATOM 14 N1 U B2405 89.354 -64.935 -8.843 1.00 44.01 N
ATOM 15 C2 U B2405 89.629 -64.462 -7.559 1.00 39.82 C
ATOM 16 O2 U B2405 89.090 -64.891 -6.554 1.00 40.14 O
ATOM 17 N3 U B2405 90.559 -63.466 -7.502 1.00 41.36 N
ATOM 18 C4 U B2405 91.237 -62.897 -8.553 1.00 40.95 C
ATOM 19 O4 U B2405 92.047 -62.004 -8.324 1.00 41.75 O
ATOM 20 C5 U B2405 90.930 -63.439 -9.838 1.00 38.22 C
ATOM 21 C6 U B2405 90.030 -64.419 -9.939 1.00 44.13 C
ATOM 22 P C B2406 86.448 -65.950 -13.530 1.00 44.04 P
ATOM 23 OP1 C B2406 85.121 -66.379 -14.023 1.00 48.42 O
ATOM 24 OP2 C B2406 87.670 -66.333 -14.304 1.00 34.92 O
ATOM 25 O5' C B2406 86.424 -64.358 -13.285 1.00 35.08 O
TER
ATOM 2 P A A 580 96.842 -78.616 -16.186 1.00 40.86 P
ATOM 3 OP1 A A 580 97.231 -79.508 -17.312 1.00 37.32 O
ATOM 4 OP2 A A 580 95.982 -77.450 -16.460 1.00 38.71 O
ATOM 5 O5' A A 580 96.143 -79.487 -15.031 1.00 36.29 O
ATOM 6 C5' A A 580 95.804 -78.911 -13.747 1.00 42.77 C
ATOM 7 C4' A A 580 94.366 -79.254 -13.318 1.00 42.11 C
ATOM 8 O4' A A 580 93.876 -78.056 -12.675 1.00 38.33 O
ATOM 9 C3' A A 580 93.379 -79.548 -14.451 1.00 39.34 C
ATOM 10 O3' A A 580 93.042 -80.943 -14.644 1.00 39.51 O
ATOM 11 C2' A A 580 92.084 -78.876 -14.023 1.00 38.70 C
ATOM 12 O2' A A 580 91.269 -79.775 -13.332 1.00 56.13 O
ATOM 13 C1' A A 580 92.543 -77.815 -13.030 1.00 35.21 C
ATOM 14 N9 A A 580 92.357 -76.394 -13.364 1.00 36.20 N
ATOM 15 C8 A A 580 92.205 -75.797 -14.598 1.00 34.25 C
ATOM 16 N7 A A 580 91.988 -74.497 -14.538 1.00 27.37 N
ATOM 17 C5 A A 580 92.008 -74.217 -13.173 1.00 31.20 C
ATOM 18 C6 A A 580 91.833 -73.007 -12.436 1.00 35.90 C
ATOM 19 N6 A A 580 91.607 -71.820 -12.998 1.00 35.72 N
ATOM 20 N1 A A 580 91.909 -73.071 -11.087 1.00 34.77 N
ATOM 21 C2 A A 580 92.166 -74.258 -10.519 1.00 36.59 C
ATOM 22 N3 A A 580 92.357 -75.459 -11.095 1.00 36.52 N
ATOM 23 C4 A A 580 92.255 -75.370 -12.439 1.00 33.38 C
ATOM 24 P A A 581 93.243 -82.046 -13.467 1.00 41.00 P
ATOM 25 OP1 A A 581 94.369 -81.703 -12.567 1.00 39.68 O
ATOM 26 OP2 A A 581 93.146 -83.403 -14.065 1.00 42.16 O
ATOM 27 O5' A A 581 91.923 -82.012 -12.588 1.00 43.02 O
TER
ATOM 1 O3' C B2404 91.950 -69.476 -11.747 1.00 37.47 O
ATOM 2 P U B2405 91.342 -68.407 -12.800 1.00 48.20 P
ATOM 3 OP1 U B2405 90.735 -69.203 -13.908 1.00 35.08 O
ATOM 4 OP2 U B2405 92.419 -67.410 -13.106 1.00 38.37 O
ATOM 5 O5' U B2405 90.162 -67.706 -11.977 1.00 46.21 O
ATOM 6 C5' U B2405 89.103 -68.493 -11.442 1.00 42.00 C
ATOM 7 C4' U B2405 88.186 -67.647 -10.600 1.00 41.67 C
ATOM 8 O4' U B2405 88.885 -67.184 -9.419 1.00 41.46 O
ATOM 9 C3' U B2405 87.625 -66.381 -11.222 1.00 37.69 C
ATOM 10 O3' U B2405 86.515 -66.624 -12.065 1.00 41.62 O
ATOM 11 C2' U B2405 87.219 -65.573 -10.000 1.00 36.75 C
ATOM 12 O2' U B2405 85.955 -65.961 -9.507 1.00 31.82 O
ATOM 13 C1' U B2405 88.307 -65.961 -8.994 1.00 40.53 C
ATOM 14 N1 U B2405 89.354 -64.935 -8.843 1.00 44.01 N
ATOM 15 C2 U B2405 89.629 -64.462 -7.559 1.00 39.82 C
ATOM 16 O2 U B2405 89.090 -64.891 -6.554 1.00 40.14 O
ATOM 17 N3 U B2405 90.559 -63.466 -7.502 1.00 41.36 N
ATOM 18 C4 U B2405 91.237 -62.897 -8.553 1.00 40.95 C
ATOM 19 O4 U B2405 92.047 -62.004 -8.324 1.00 41.75 O
ATOM 20 C5 U B2405 90.930 -63.439 -9.838 1.00 38.22 C
ATOM 21 C6 U B2405 90.030 -64.419 -9.939 1.00 44.13 C
ATOM 22 P C B2406 86.448 -65.950 -13.530 1.00 44.04 P
ATOM 23 OP1 C B2406 85.121 -66.379 -14.023 1.00 48.42 O
ATOM 24 OP2 C B2406 87.670 -66.333 -14.304 1.00 34.92 O
ATOM 25 O5' C B2406 86.424 -64.358 -13.285 1.00 35.08 O
TER
Atoms:
OP1: (97.231,-79.508,-17.312)
OP2: (95.982,-77.450,-16.460)
C3': (93.379,-79.548,-14.451)
C1': (92.543,-77.815,-13.030)
C5': (95.804,-78.911,-13.747)
O4': (93.876,-78.056,-12.675)
C8: (92.205,-75.797,-14.598)
O2': (91.269,-79.775,-13.332)
C6: (91.833,-73.007,-12.436)
C5: (92.008,-74.217,-13.173)
C4: (92.255,-75.370,-12.439)
P: (96.842,-78.616,-16.186)
C4': (94.366,-79.254,-13.318)
C2': (92.084,-78.876,-14.023)
C2: (92.166,-74.258,-10.519)
N1: (91.909,-73.071,-11.087)
N3: (92.357,-75.459,-11.095)
N6: (91.607,-71.820,-12.998)
N7: (91.988,-74.497,-14.538)
N9: (92.357,-76.394,-13.364)
O5': (96.143,-79.487,-15.031)
O3': (93.042,-80.943,-14.644)
OP2: (95.982,-77.450,-16.460)
C3': (93.379,-79.548,-14.451)
C1': (92.543,-77.815,-13.030)
C5': (95.804,-78.911,-13.747)
O4': (93.876,-78.056,-12.675)
C8: (92.205,-75.797,-14.598)
O2': (91.269,-79.775,-13.332)
C6: (91.833,-73.007,-12.436)
C5: (92.008,-74.217,-13.173)
C4: (92.255,-75.370,-12.439)
P: (96.842,-78.616,-16.186)
C4': (94.366,-79.254,-13.318)
C2': (92.084,-78.876,-14.023)
C2: (92.166,-74.258,-10.519)
N1: (91.909,-73.071,-11.087)
N3: (92.357,-75.459,-11.095)
N6: (91.607,-71.820,-12.998)
N7: (91.988,-74.497,-14.538)
N9: (92.357,-76.394,-13.364)
O5': (96.143,-79.487,-15.031)
O3': (93.042,-80.943,-14.644)
C4: (91.237,-62.897,-8.553)
N3: (90.559,-63.466,-7.502)
OP1: (90.735,-69.203,-13.908)
OP2: (92.419,-67.410,-13.106)
C2: (89.629,-64.462,-7.559)
C1': (88.307,-65.961,-8.994)
C3': (87.625,-66.381,-11.222)
O5': (90.162,-67.706,-11.977)
O4': (88.885,-67.184,-9.419)
C5': (89.103,-68.493,-11.442)
P: (91.342,-68.407,-12.800)
C4': (88.186,-67.647,-10.600)
C2': (87.219,-65.573,-10.000)
O2': (85.955,-65.961,-9.507)
N1: (89.354,-64.935,-8.843)
O4: (92.047,-62.004,-8.324)
O2: (89.090,-64.891,-6.554)
C6: (90.030,-64.419,-9.939)
C5: (90.930,-63.439,-9.838)
O3': (86.515,-66.624,-12.065)
N3: (90.559,-63.466,-7.502)
OP1: (90.735,-69.203,-13.908)
OP2: (92.419,-67.410,-13.106)
C2: (89.629,-64.462,-7.559)
C1': (88.307,-65.961,-8.994)
C3': (87.625,-66.381,-11.222)
O5': (90.162,-67.706,-11.977)
O4': (88.885,-67.184,-9.419)
C5': (89.103,-68.493,-11.442)
P: (91.342,-68.407,-12.800)
C4': (88.186,-67.647,-10.600)
C2': (87.219,-65.573,-10.000)
O2': (85.955,-65.961,-9.507)
N1: (89.354,-64.935,-8.843)
O4: (92.047,-62.004,-8.324)
O2: (89.090,-64.891,-6.554)
C6: (90.030,-64.419,-9.939)
C5: (90.930,-63.439,-9.838)
O3': (86.515,-66.624,-12.065)
Image (generated by PyMOL):