Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1709:A1704
Extra
PDB:
ATOM 1 O3' A A1708 64.615 -38.109 -4.126 1.00 31.96 O
ATOM 2 P A A1709 63.030 -37.888 -3.937 1.00 32.25 P
ATOM 3 OP1 A A1709 62.755 -37.859 -2.473 1.00 34.26 O
ATOM 4 OP2 A A1709 62.334 -38.897 -4.780 1.00 32.06 O
ATOM 5 O5' A A1709 62.825 -36.447 -4.532 1.00 25.95 O
ATOM 6 C5' A A1709 63.465 -35.340 -3.934 1.00 27.51 C
ATOM 7 C4' A A1709 62.506 -34.205 -3.705 1.00 31.73 C
ATOM 8 O4' A A1709 62.169 -33.616 -4.980 1.00 32.74 O
ATOM 9 C3' A A1709 61.194 -34.585 -3.055 1.00 27.67 C
ATOM 10 O3' A A1709 60.684 -33.466 -2.348 1.00 26.13 O
ATOM 11 C2' A A1709 60.285 -34.860 -4.244 1.00 28.39 C
ATOM 12 O2' A A1709 58.909 -34.609 -3.990 1.00 35.35 O
ATOM 13 C1' A A1709 60.839 -33.923 -5.328 1.00 27.82 C
ATOM 14 N9 A A1709 60.892 -34.558 -6.628 1.00 28.96 N
ATOM 15 C8 A A1709 62.042 -34.999 -7.192 1.00 28.66 C
ATOM 16 N7 A A1709 61.803 -35.572 -8.324 1.00 38.03 N
ATOM 17 C5 A A1709 60.432 -35.498 -8.515 1.00 36.51 C
ATOM 18 C6 A A1709 59.597 -35.942 -9.555 1.00 40.79 C
ATOM 19 N6 A A1709 60.030 -36.571 -10.664 1.00 41.00 N
ATOM 20 N1 A A1709 58.279 -35.720 -9.411 1.00 45.98 N
ATOM 21 C2 A A1709 57.856 -35.078 -8.315 1.00 41.19 C
ATOM 22 N3 A A1709 58.539 -34.614 -7.281 1.00 35.44 N
ATOM 23 C4 A A1709 59.845 -34.876 -7.451 1.00 35.48 C
ATOM 24 P A A1710 61.377 -32.970 -0.993 1.00 31.54 P
ATOM 25 OP1 A A1710 61.491 -34.144 -0.093 1.00 40.51 O
ATOM 26 OP2 A A1710 60.599 -31.785 -0.535 1.00 44.30 O
ATOM 27 O5' A A1710 62.811 -32.513 -1.475 1.00 27.03 O
TER
ATOM 1 O3' U B1703 59.295 -35.630 -14.375 1.00 24.10 O
ATOM 2 P U B1704 58.889 -37.139 -14.033 1.00 22.22 P
ATOM 3 OP1 U B1704 58.317 -37.713 -15.273 1.00 28.14 O
ATOM 4 OP2 U B1704 58.064 -37.118 -12.759 1.00 19.07 O
ATOM 5 O5' U B1704 60.271 -37.813 -13.758 1.00 32.45 O
ATOM 6 C5' U B1704 60.980 -38.420 -14.803 1.00 29.77 C
ATOM 7 C4' U B1704 62.339 -38.820 -14.347 1.00 32.30 C
ATOM 8 O4' U B1704 63.021 -37.675 -13.818 1.00 36.93 O
ATOM 9 C3' U B1704 62.387 -39.811 -13.206 1.00 26.46 C
ATOM 10 O3' U B1704 62.187 -41.130 -13.643 1.00 32.29 O
ATOM 11 C2' U B1704 63.769 -39.574 -12.604 1.00 31.59 C
ATOM 12 O2' U B1704 64.759 -40.379 -13.215 1.00 28.40 O
ATOM 13 C1' U B1704 64.037 -38.118 -12.971 1.00 31.97 C
ATOM 14 N1 U B1704 64.122 -37.279 -11.793 1.00 34.84 N
ATOM 15 C2 U B1704 65.372 -36.728 -11.844 1.00 39.41 C
ATOM 16 O2 U B1704 66.077 -36.917 -12.832 1.00 41.31 O
ATOM 17 N3 U B1704 65.752 -35.961 -10.796 1.00 31.01 N
ATOM 18 C4 U B1704 64.997 -35.744 -9.713 1.00 30.99 C
ATOM 19 O4 U B1704 65.528 -34.995 -8.883 1.00 39.12 O
ATOM 20 C5 U B1704 63.705 -36.413 -9.728 1.00 36.25 C
ATOM 21 C6 U B1704 63.268 -37.184 -10.737 1.00 25.22 C
ATOM 22 P A B1705 61.025 -42.033 -13.011 1.00 34.63 P
ATOM 23 OP1 A B1705 60.654 -41.410 -11.724 1.00 46.98 O
ATOM 24 OP2 A B1705 61.501 -43.451 -13.028 1.00 37.27 O
ATOM 25 O5' A B1705 59.837 -41.866 -14.039 1.00 38.84 O
TER
ATOM 2 P A A1709 63.030 -37.888 -3.937 1.00 32.25 P
ATOM 3 OP1 A A1709 62.755 -37.859 -2.473 1.00 34.26 O
ATOM 4 OP2 A A1709 62.334 -38.897 -4.780 1.00 32.06 O
ATOM 5 O5' A A1709 62.825 -36.447 -4.532 1.00 25.95 O
ATOM 6 C5' A A1709 63.465 -35.340 -3.934 1.00 27.51 C
ATOM 7 C4' A A1709 62.506 -34.205 -3.705 1.00 31.73 C
ATOM 8 O4' A A1709 62.169 -33.616 -4.980 1.00 32.74 O
ATOM 9 C3' A A1709 61.194 -34.585 -3.055 1.00 27.67 C
ATOM 10 O3' A A1709 60.684 -33.466 -2.348 1.00 26.13 O
ATOM 11 C2' A A1709 60.285 -34.860 -4.244 1.00 28.39 C
ATOM 12 O2' A A1709 58.909 -34.609 -3.990 1.00 35.35 O
ATOM 13 C1' A A1709 60.839 -33.923 -5.328 1.00 27.82 C
ATOM 14 N9 A A1709 60.892 -34.558 -6.628 1.00 28.96 N
ATOM 15 C8 A A1709 62.042 -34.999 -7.192 1.00 28.66 C
ATOM 16 N7 A A1709 61.803 -35.572 -8.324 1.00 38.03 N
ATOM 17 C5 A A1709 60.432 -35.498 -8.515 1.00 36.51 C
ATOM 18 C6 A A1709 59.597 -35.942 -9.555 1.00 40.79 C
ATOM 19 N6 A A1709 60.030 -36.571 -10.664 1.00 41.00 N
ATOM 20 N1 A A1709 58.279 -35.720 -9.411 1.00 45.98 N
ATOM 21 C2 A A1709 57.856 -35.078 -8.315 1.00 41.19 C
ATOM 22 N3 A A1709 58.539 -34.614 -7.281 1.00 35.44 N
ATOM 23 C4 A A1709 59.845 -34.876 -7.451 1.00 35.48 C
ATOM 24 P A A1710 61.377 -32.970 -0.993 1.00 31.54 P
ATOM 25 OP1 A A1710 61.491 -34.144 -0.093 1.00 40.51 O
ATOM 26 OP2 A A1710 60.599 -31.785 -0.535 1.00 44.30 O
ATOM 27 O5' A A1710 62.811 -32.513 -1.475 1.00 27.03 O
TER
ATOM 1 O3' U B1703 59.295 -35.630 -14.375 1.00 24.10 O
ATOM 2 P U B1704 58.889 -37.139 -14.033 1.00 22.22 P
ATOM 3 OP1 U B1704 58.317 -37.713 -15.273 1.00 28.14 O
ATOM 4 OP2 U B1704 58.064 -37.118 -12.759 1.00 19.07 O
ATOM 5 O5' U B1704 60.271 -37.813 -13.758 1.00 32.45 O
ATOM 6 C5' U B1704 60.980 -38.420 -14.803 1.00 29.77 C
ATOM 7 C4' U B1704 62.339 -38.820 -14.347 1.00 32.30 C
ATOM 8 O4' U B1704 63.021 -37.675 -13.818 1.00 36.93 O
ATOM 9 C3' U B1704 62.387 -39.811 -13.206 1.00 26.46 C
ATOM 10 O3' U B1704 62.187 -41.130 -13.643 1.00 32.29 O
ATOM 11 C2' U B1704 63.769 -39.574 -12.604 1.00 31.59 C
ATOM 12 O2' U B1704 64.759 -40.379 -13.215 1.00 28.40 O
ATOM 13 C1' U B1704 64.037 -38.118 -12.971 1.00 31.97 C
ATOM 14 N1 U B1704 64.122 -37.279 -11.793 1.00 34.84 N
ATOM 15 C2 U B1704 65.372 -36.728 -11.844 1.00 39.41 C
ATOM 16 O2 U B1704 66.077 -36.917 -12.832 1.00 41.31 O
ATOM 17 N3 U B1704 65.752 -35.961 -10.796 1.00 31.01 N
ATOM 18 C4 U B1704 64.997 -35.744 -9.713 1.00 30.99 C
ATOM 19 O4 U B1704 65.528 -34.995 -8.883 1.00 39.12 O
ATOM 20 C5 U B1704 63.705 -36.413 -9.728 1.00 36.25 C
ATOM 21 C6 U B1704 63.268 -37.184 -10.737 1.00 25.22 C
ATOM 22 P A B1705 61.025 -42.033 -13.011 1.00 34.63 P
ATOM 23 OP1 A B1705 60.654 -41.410 -11.724 1.00 46.98 O
ATOM 24 OP2 A B1705 61.501 -43.451 -13.028 1.00 37.27 O
ATOM 25 O5' A B1705 59.837 -41.866 -14.039 1.00 38.84 O
TER
Atoms:
OP1: (62.755,-37.859,-2.473)
OP2: (62.334,-38.897,-4.780)
C3': (61.194,-34.585,-3.055)
C1': (60.839,-33.923,-5.328)
C5': (63.465,-35.340,-3.934)
O4': (62.169,-33.616,-4.980)
C8: (62.042,-34.999,-7.192)
O2': (58.909,-34.609,-3.990)
C6: (59.597,-35.942,-9.555)
C5: (60.432,-35.498,-8.515)
C4: (59.845,-34.876,-7.451)
P: (63.030,-37.888,-3.937)
C4': (62.506,-34.205,-3.705)
C2': (60.285,-34.860,-4.244)
C2: (57.856,-35.078,-8.315)
N1: (58.279,-35.720,-9.411)
N3: (58.539,-34.614,-7.281)
N6: (60.030,-36.571,-10.664)
N7: (61.803,-35.572,-8.324)
N9: (60.892,-34.558,-6.628)
O5': (62.825,-36.447,-4.532)
O3': (60.684,-33.466,-2.348)
OP2: (62.334,-38.897,-4.780)
C3': (61.194,-34.585,-3.055)
C1': (60.839,-33.923,-5.328)
C5': (63.465,-35.340,-3.934)
O4': (62.169,-33.616,-4.980)
C8: (62.042,-34.999,-7.192)
O2': (58.909,-34.609,-3.990)
C6: (59.597,-35.942,-9.555)
C5: (60.432,-35.498,-8.515)
C4: (59.845,-34.876,-7.451)
P: (63.030,-37.888,-3.937)
C4': (62.506,-34.205,-3.705)
C2': (60.285,-34.860,-4.244)
C2: (57.856,-35.078,-8.315)
N1: (58.279,-35.720,-9.411)
N3: (58.539,-34.614,-7.281)
N6: (60.030,-36.571,-10.664)
N7: (61.803,-35.572,-8.324)
N9: (60.892,-34.558,-6.628)
O5': (62.825,-36.447,-4.532)
O3': (60.684,-33.466,-2.348)
C4: (64.997,-35.744,-9.713)
N3: (65.752,-35.961,-10.796)
OP1: (58.317,-37.713,-15.273)
OP2: (58.064,-37.118,-12.759)
C2: (65.372,-36.728,-11.844)
C1': (64.037,-38.118,-12.971)
C3': (62.387,-39.811,-13.206)
O5': (60.271,-37.813,-13.758)
O4': (63.021,-37.675,-13.818)
C5': (60.980,-38.420,-14.803)
P: (58.889,-37.139,-14.033)
C4': (62.339,-38.820,-14.347)
C2': (63.769,-39.574,-12.604)
O2': (64.759,-40.379,-13.215)
N1: (64.122,-37.279,-11.793)
O4: (65.528,-34.995,-8.883)
O2: (66.077,-36.917,-12.832)
C6: (63.268,-37.184,-10.737)
C5: (63.705,-36.413,-9.728)
O3': (62.187,-41.130,-13.643)
N3: (65.752,-35.961,-10.796)
OP1: (58.317,-37.713,-15.273)
OP2: (58.064,-37.118,-12.759)
C2: (65.372,-36.728,-11.844)
C1': (64.037,-38.118,-12.971)
C3': (62.387,-39.811,-13.206)
O5': (60.271,-37.813,-13.758)
O4': (63.021,-37.675,-13.818)
C5': (60.980,-38.420,-14.803)
P: (58.889,-37.139,-14.033)
C4': (62.339,-38.820,-14.347)
C2': (63.769,-39.574,-12.604)
O2': (64.759,-40.379,-13.215)
N1: (64.122,-37.279,-11.793)
O4: (65.528,-34.995,-8.883)
O2: (66.077,-36.917,-12.832)
C6: (63.268,-37.184,-10.737)
C5: (63.705,-36.413,-9.728)
O3': (62.187,-41.130,-13.643)
Image (generated by PyMOL):