ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1709:A1704

Extra

PDB:
ATOM 1 O3' A A1708 64.524 -38.396 -4.517 1.00 42.04 O
ATOM 2 P A A1709 62.936 -38.247 -4.297 1.00 36.06 P
ATOM 3 OP1 A A1709 62.667 -38.301 -2.841 1.00 35.99 O
ATOM 4 OP2 A A1709 62.299 -39.240 -5.148 1.00 51.16 O
ATOM 5 O5' A A1709 62.664 -36.764 -4.831 1.00 25.70 O
ATOM 6 C5' A A1709 63.295 -35.648 -4.195 1.00 35.91 C
ATOM 7 C4' A A1709 62.360 -34.476 -3.969 1.00 39.31 C
ATOM 8 O4' A A1709 62.051 -33.869 -5.247 1.00 38.62 O
ATOM 9 C3' A A1709 61.030 -34.808 -3.319 1.00 40.13 C
ATOM 10 O3' A A1709 60.527 -33.668 -2.610 1.00 44.00 O
ATOM 11 C2' A A1709 60.131 -35.072 -4.531 1.00 39.63 C
ATOM 12 O2' A A1709 58.747 -34.833 -4.305 1.00 46.25 O
ATOM 13 C1' A A1709 60.711 -34.126 -5.604 1.00 32.94 C
ATOM 14 N9 A A1709 60.740 -34.735 -6.925 1.00 46.44 N
ATOM 15 C8 A A1709 61.867 -35.141 -7.579 1.00 45.61 C
ATOM 16 N7 A A1709 61.589 -35.711 -8.718 1.00 50.10 N
ATOM 17 C5 A A1709 60.217 -35.685 -8.814 1.00 41.88 C
ATOM 18 C6 A A1709 59.346 -36.145 -9.782 1.00 48.06 C
ATOM 19 N6 A A1709 59.722 -36.738 -10.921 1.00 58.88 N
ATOM 20 N1 A A1709 58.041 -35.973 -9.556 1.00 51.16 N
ATOM 21 C2 A A1709 57.655 -35.364 -8.437 1.00 43.35 C
ATOM 22 N3 A A1709 58.375 -34.899 -7.448 1.00 41.07 N
ATOM 23 C4 A A1709 59.669 -35.099 -7.709 1.00 48.57 C
ATOM 24 P A A1710 61.249 -33.094 -1.286 1.00 42.79 P
ATOM 25 OP1 A A1710 61.359 -34.210 -0.296 1.00 40.59 O
ATOM 26 OP2 A A1710 60.496 -31.869 -0.901 1.00 55.00 O
ATOM 27 O5' A A1710 62.683 -32.688 -1.812 1.00 34.15 O
TER

ATOM 1 O3' U B1703 59.041 -35.860 -14.745 1.00 28.78 O
ATOM 2 P U B1704 58.802 -37.386 -14.374 1.00 36.26 P
ATOM 3 OP1 U B1704 58.242 -38.049 -15.575 1.00 24.80 O
ATOM 4 OP2 U B1704 58.029 -37.429 -13.067 1.00 29.25 O
ATOM 5 O5' U B1704 60.261 -37.905 -14.155 1.00 46.48 O
ATOM 6 C5' U B1704 60.896 -38.655 -15.166 1.00 40.07 C
ATOM 7 C4' U B1704 62.245 -39.083 -14.721 1.00 43.21 C
ATOM 8 O4' U B1704 62.923 -37.959 -14.159 1.00 52.20 O
ATOM 9 C3' U B1704 62.282 -40.086 -13.602 1.00 40.99 C
ATOM 10 O3' U B1704 62.040 -41.395 -14.059 1.00 43.34 O
ATOM 11 C2' U B1704 63.680 -39.885 -13.030 1.00 44.43 C
ATOM 12 O2' U B1704 64.635 -40.650 -13.742 1.00 47.50 O
ATOM 13 C1' U B1704 63.939 -38.420 -13.343 1.00 39.10 C
ATOM 14 N1 U B1704 64.019 -37.606 -12.159 1.00 45.13 N
ATOM 15 C2 U B1704 65.300 -37.083 -12.180 1.00 55.03 C
ATOM 16 O2 U B1704 66.058 -37.316 -13.110 1.00 58.24 O
ATOM 17 N3 U B1704 65.685 -36.296 -11.150 1.00 38.58 N
ATOM 18 C4 U B1704 64.884 -36.005 -10.120 1.00 40.01 C
ATOM 19 O4 U B1704 65.439 -35.266 -9.301 1.00 49.40 O
ATOM 20 C5 U B1704 63.558 -36.611 -10.174 1.00 51.87 C
ATOM 21 C6 U B1704 63.116 -37.396 -11.174 1.00 36.78 C
ATOM 22 P A B1705 60.982 -42.324 -13.310 1.00 35.26 P
ATOM 23 OP1 A B1705 60.681 -41.668 -12.014 1.00 58.12 O
ATOM 24 OP2 A B1705 61.518 -43.710 -13.302 1.00 39.97 O
ATOM 25 O5' A B1705 59.708 -42.244 -14.268 1.00 57.10 O
TER

Atoms:
OP1: (62.667,-38.301,-2.841)
OP2: (62.299,-39.240,-5.148)
C3': (61.030,-34.808,-3.319)
C1': (60.711,-34.126,-5.604)
C5': (63.295,-35.648,-4.195)
O4': (62.051,-33.869,-5.247)
C8: (61.867,-35.141,-7.579)
O2': (58.747,-34.833,-4.305)
C6: (59.346,-36.145,-9.782)
C5: (60.217,-35.685,-8.814)
C4: (59.669,-35.099,-7.709)
P: (62.936,-38.247,-4.297)
C4': (62.360,-34.476,-3.969)
C2': (60.131,-35.072,-4.531)
C2: (57.655,-35.364,-8.437)
N1: (58.041,-35.973,-9.556)
N3: (58.375,-34.899,-7.448)
N6: (59.722,-36.738,-10.921)
N7: (61.589,-35.711,-8.718)
N9: (60.740,-34.735,-6.925)
O5': (62.664,-36.764,-4.831)
O3': (60.527,-33.668,-2.610)
C4: (64.884,-36.005,-10.120)
N3: (65.685,-36.296,-11.150)
OP1: (58.242,-38.049,-15.575)
OP2: (58.029,-37.429,-13.067)
C2: (65.300,-37.083,-12.180)
C1': (63.939,-38.420,-13.343)
C3': (62.282,-40.086,-13.602)
O5': (60.261,-37.905,-14.155)
O4': (62.923,-37.959,-14.159)
C5': (60.896,-38.655,-15.166)
P: (58.802,-37.386,-14.374)
C4': (62.245,-39.083,-14.721)
C2': (63.680,-39.885,-13.030)
O2': (64.635,-40.650,-13.742)
N1: (64.019,-37.606,-12.159)
O4: (65.439,-35.266,-9.301)
O2: (66.058,-37.316,-13.110)
C6: (63.116,-37.396,-11.174)
C5: (63.558,-36.611,-10.174)
O3': (62.040,-41.395,-14.059)
Image (generated by PyMOL):
PyMOL image
show in jmol