Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0473:0497
Extra
PDB:
ATOM 1 O3' A A 472 22.737 156.211 45.148 1.00 43.68 O
ATOM 2 P A A 473 24.204 156.667 45.628 1.00 43.89 P
ATOM 3 OP1 A A 473 24.869 157.302 44.460 1.00 42.29 O
ATOM 4 OP2 A A 473 24.845 155.500 46.288 1.00 42.41 O
ATOM 5 O5' A A 473 23.906 157.804 46.705 1.00 41.00 O
ATOM 6 C5' A A 473 24.865 158.837 46.980 1.00 40.31 C
ATOM 7 C4' A A 473 24.289 159.844 47.950 1.00 41.49 C
ATOM 8 O4' A A 473 23.782 159.161 49.133 1.00 40.77 O
ATOM 9 C3' A A 473 25.300 160.868 48.468 1.00 42.53 C
ATOM 10 O3' A A 473 24.642 162.080 48.856 1.00 45.04 O
ATOM 11 C2' A A 473 25.748 160.210 49.767 1.00 42.28 C
ATOM 12 O2' A A 473 26.349 161.096 50.688 1.00 44.05 O
ATOM 13 C1' A A 473 24.401 159.711 50.272 1.00 40.70 C
ATOM 14 N9 A A 473 24.406 158.730 51.353 1.00 41.47 N
ATOM 15 C8 A A 473 25.130 157.569 51.493 1.00 41.44 C
ATOM 16 N7 A A 473 24.896 156.938 52.618 1.00 40.99 N
ATOM 17 C5 A A 473 23.951 157.733 53.257 1.00 40.20 C
ATOM 18 C6 A A 473 23.290 157.614 54.487 1.00 40.58 C
ATOM 19 N6 A A 473 23.486 156.611 55.336 1.00 41.92 N
ATOM 20 N1 A A 473 22.405 158.576 54.822 1.00 41.32 N
ATOM 21 C2 A A 473 22.207 159.584 53.972 1.00 40.29 C
ATOM 22 N3 A A 473 22.766 159.807 52.790 1.00 39.45 N
ATOM 23 C4 A A 473 23.639 158.833 52.487 1.00 40.02 C
ATOM 24 P A A 474 23.975 163.046 47.759 1.00 45.49 P
ATOM 25 OP1 A A 474 23.935 162.354 46.442 1.00 44.47 O
ATOM 26 OP2 A A 474 24.652 164.360 47.871 1.00 46.35 O
ATOM 27 O5' A A 474 22.487 163.219 48.308 1.00 44.55 O
TER
ATOM 1 O3' A B 496 14.477 152.523 62.551 1.00 51.19 O
ATOM 2 P A B 497 14.529 153.969 63.247 1.00 54.75 P
ATOM 3 OP1 A B 497 13.777 153.885 64.523 1.00 54.90 O
ATOM 4 OP2 A B 497 14.160 154.997 62.242 1.00 53.30 O
ATOM 5 O5' A B 497 16.051 154.145 63.657 1.00 53.12 O
ATOM 6 C5' A B 497 17.053 154.253 62.664 1.00 54.31 C
ATOM 7 C4' A B 497 18.401 154.067 63.283 1.00 55.88 C
ATOM 8 O4' A B 497 19.404 154.197 62.251 1.00 56.95 O
ATOM 9 C3' A B 497 18.776 155.081 64.350 1.00 56.51 C
ATOM 10 O3' A B 497 19.671 154.496 65.279 1.00 60.32 O
ATOM 11 C2' A B 497 19.423 156.200 63.544 1.00 56.40 C
ATOM 12 O2' A B 497 20.437 156.873 64.261 1.00 55.50 O
ATOM 13 C1' A B 497 20.020 155.462 62.343 1.00 56.70 C
ATOM 14 N9 A B 497 19.779 156.175 61.085 1.00 56.55 N
ATOM 15 C8 A B 497 18.719 156.985 60.757 1.00 56.01 C
ATOM 16 N7 A B 497 18.825 157.541 59.577 1.00 56.50 N
ATOM 17 C5 A B 497 20.026 157.053 59.085 1.00 55.82 C
ATOM 18 C6 A B 497 20.721 157.279 57.882 1.00 55.71 C
ATOM 19 N6 A B 497 20.307 158.105 56.922 1.00 55.46 N
ATOM 20 N1 A B 497 21.883 156.624 57.701 1.00 56.47 N
ATOM 21 C2 A B 497 22.318 155.810 58.668 1.00 56.32 C
ATOM 22 N3 A B 497 21.767 155.527 59.842 1.00 56.07 N
ATOM 23 C4 A B 497 20.611 156.190 59.993 1.00 56.16 C
ATOM 24 P U B 498 19.468 154.755 66.852 1.00 62.08 P
ATOM 25 OP1 U B 498 18.023 154.627 67.163 1.00 61.49 O
ATOM 26 OP2 U B 498 20.185 155.993 67.225 1.00 62.42 O
ATOM 27 O5' U B 498 20.227 153.532 67.530 1.00 66.39 O
TER
ATOM 2 P A A 473 24.204 156.667 45.628 1.00 43.89 P
ATOM 3 OP1 A A 473 24.869 157.302 44.460 1.00 42.29 O
ATOM 4 OP2 A A 473 24.845 155.500 46.288 1.00 42.41 O
ATOM 5 O5' A A 473 23.906 157.804 46.705 1.00 41.00 O
ATOM 6 C5' A A 473 24.865 158.837 46.980 1.00 40.31 C
ATOM 7 C4' A A 473 24.289 159.844 47.950 1.00 41.49 C
ATOM 8 O4' A A 473 23.782 159.161 49.133 1.00 40.77 O
ATOM 9 C3' A A 473 25.300 160.868 48.468 1.00 42.53 C
ATOM 10 O3' A A 473 24.642 162.080 48.856 1.00 45.04 O
ATOM 11 C2' A A 473 25.748 160.210 49.767 1.00 42.28 C
ATOM 12 O2' A A 473 26.349 161.096 50.688 1.00 44.05 O
ATOM 13 C1' A A 473 24.401 159.711 50.272 1.00 40.70 C
ATOM 14 N9 A A 473 24.406 158.730 51.353 1.00 41.47 N
ATOM 15 C8 A A 473 25.130 157.569 51.493 1.00 41.44 C
ATOM 16 N7 A A 473 24.896 156.938 52.618 1.00 40.99 N
ATOM 17 C5 A A 473 23.951 157.733 53.257 1.00 40.20 C
ATOM 18 C6 A A 473 23.290 157.614 54.487 1.00 40.58 C
ATOM 19 N6 A A 473 23.486 156.611 55.336 1.00 41.92 N
ATOM 20 N1 A A 473 22.405 158.576 54.822 1.00 41.32 N
ATOM 21 C2 A A 473 22.207 159.584 53.972 1.00 40.29 C
ATOM 22 N3 A A 473 22.766 159.807 52.790 1.00 39.45 N
ATOM 23 C4 A A 473 23.639 158.833 52.487 1.00 40.02 C
ATOM 24 P A A 474 23.975 163.046 47.759 1.00 45.49 P
ATOM 25 OP1 A A 474 23.935 162.354 46.442 1.00 44.47 O
ATOM 26 OP2 A A 474 24.652 164.360 47.871 1.00 46.35 O
ATOM 27 O5' A A 474 22.487 163.219 48.308 1.00 44.55 O
TER
ATOM 1 O3' A B 496 14.477 152.523 62.551 1.00 51.19 O
ATOM 2 P A B 497 14.529 153.969 63.247 1.00 54.75 P
ATOM 3 OP1 A B 497 13.777 153.885 64.523 1.00 54.90 O
ATOM 4 OP2 A B 497 14.160 154.997 62.242 1.00 53.30 O
ATOM 5 O5' A B 497 16.051 154.145 63.657 1.00 53.12 O
ATOM 6 C5' A B 497 17.053 154.253 62.664 1.00 54.31 C
ATOM 7 C4' A B 497 18.401 154.067 63.283 1.00 55.88 C
ATOM 8 O4' A B 497 19.404 154.197 62.251 1.00 56.95 O
ATOM 9 C3' A B 497 18.776 155.081 64.350 1.00 56.51 C
ATOM 10 O3' A B 497 19.671 154.496 65.279 1.00 60.32 O
ATOM 11 C2' A B 497 19.423 156.200 63.544 1.00 56.40 C
ATOM 12 O2' A B 497 20.437 156.873 64.261 1.00 55.50 O
ATOM 13 C1' A B 497 20.020 155.462 62.343 1.00 56.70 C
ATOM 14 N9 A B 497 19.779 156.175 61.085 1.00 56.55 N
ATOM 15 C8 A B 497 18.719 156.985 60.757 1.00 56.01 C
ATOM 16 N7 A B 497 18.825 157.541 59.577 1.00 56.50 N
ATOM 17 C5 A B 497 20.026 157.053 59.085 1.00 55.82 C
ATOM 18 C6 A B 497 20.721 157.279 57.882 1.00 55.71 C
ATOM 19 N6 A B 497 20.307 158.105 56.922 1.00 55.46 N
ATOM 20 N1 A B 497 21.883 156.624 57.701 1.00 56.47 N
ATOM 21 C2 A B 497 22.318 155.810 58.668 1.00 56.32 C
ATOM 22 N3 A B 497 21.767 155.527 59.842 1.00 56.07 N
ATOM 23 C4 A B 497 20.611 156.190 59.993 1.00 56.16 C
ATOM 24 P U B 498 19.468 154.755 66.852 1.00 62.08 P
ATOM 25 OP1 U B 498 18.023 154.627 67.163 1.00 61.49 O
ATOM 26 OP2 U B 498 20.185 155.993 67.225 1.00 62.42 O
ATOM 27 O5' U B 498 20.227 153.532 67.530 1.00 66.39 O
TER
Atoms:
OP1: (24.869,157.302,44.460)
OP2: (24.845,155.500,46.288)
C3': (25.300,160.868,48.468)
C1': (24.401,159.711,50.272)
C5': (24.865,158.837,46.980)
O4': (23.782,159.161,49.133)
C8: (25.130,157.569,51.493)
O2': (26.349,161.096,50.688)
C6: (23.290,157.614,54.487)
C5: (23.951,157.733,53.257)
C4: (23.639,158.833,52.487)
P: (24.204,156.667,45.628)
C4': (24.289,159.844,47.950)
C2': (25.748,160.210,49.767)
C2: (22.207,159.584,53.972)
N1: (22.405,158.576,54.822)
N3: (22.766,159.807,52.790)
N6: (23.486,156.611,55.336)
N7: (24.896,156.938,52.618)
N9: (24.406,158.730,51.353)
O5': (23.906,157.804,46.705)
O3': (24.642,162.080,48.856)
OP2: (24.845,155.500,46.288)
C3': (25.300,160.868,48.468)
C1': (24.401,159.711,50.272)
C5': (24.865,158.837,46.980)
O4': (23.782,159.161,49.133)
C8: (25.130,157.569,51.493)
O2': (26.349,161.096,50.688)
C6: (23.290,157.614,54.487)
C5: (23.951,157.733,53.257)
C4: (23.639,158.833,52.487)
P: (24.204,156.667,45.628)
C4': (24.289,159.844,47.950)
C2': (25.748,160.210,49.767)
C2: (22.207,159.584,53.972)
N1: (22.405,158.576,54.822)
N3: (22.766,159.807,52.790)
N6: (23.486,156.611,55.336)
N7: (24.896,156.938,52.618)
N9: (24.406,158.730,51.353)
O5': (23.906,157.804,46.705)
O3': (24.642,162.080,48.856)
OP1: (13.777,153.885,64.523)
OP2: (14.160,154.997,62.242)
C3': (18.776,155.081,64.350)
C1': (20.020,155.462,62.343)
C5': (17.053,154.253,62.664)
O4': (19.404,154.197,62.251)
C8: (18.719,156.985,60.757)
O2': (20.437,156.873,64.261)
C6: (20.721,157.279,57.882)
C5: (20.026,157.053,59.085)
C4: (20.611,156.190,59.993)
P: (14.529,153.969,63.247)
C4': (18.401,154.067,63.283)
C2': (19.423,156.200,63.544)
C2: (22.318,155.810,58.668)
N1: (21.883,156.624,57.701)
N3: (21.767,155.527,59.842)
N6: (20.307,158.105,56.922)
N7: (18.825,157.541,59.577)
N9: (19.779,156.175,61.085)
O5': (16.051,154.145,63.657)
O3': (19.671,154.496,65.279)
OP2: (14.160,154.997,62.242)
C3': (18.776,155.081,64.350)
C1': (20.020,155.462,62.343)
C5': (17.053,154.253,62.664)
O4': (19.404,154.197,62.251)
C8: (18.719,156.985,60.757)
O2': (20.437,156.873,64.261)
C6: (20.721,157.279,57.882)
C5: (20.026,157.053,59.085)
C4: (20.611,156.190,59.993)
P: (14.529,153.969,63.247)
C4': (18.401,154.067,63.283)
C2': (19.423,156.200,63.544)
C2: (22.318,155.810,58.668)
N1: (21.883,156.624,57.701)
N3: (21.767,155.527,59.842)
N6: (20.307,158.105,56.922)
N7: (18.825,157.541,59.577)
N9: (19.779,156.175,61.085)
O5': (16.051,154.145,63.657)
O3': (19.671,154.496,65.279)
Image (generated by PyMOL):