Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A351:A315
Extra
PDB:
ATOM 1 O3' C A 350 -24.867 46.033 118.315 1.00 10.22 O
ATOM 2 P A A 351 -25.728 47.349 117.967 1.00 1.84 P
ATOM 3 OP1 A A 351 -25.561 48.287 119.092 1.00 1.84 O
ATOM 4 OP2 A A 351 -27.106 46.921 117.591 1.00 1.84 O
ATOM 5 O5' A A 351 -24.977 47.890 116.695 1.00 1.84 O
ATOM 6 C5' A A 351 -24.809 47.068 115.562 1.00 1.84 C
ATOM 7 C4' A A 351 -23.367 47.019 115.133 1.00 1.84 C
ATOM 8 O4' A A 351 -22.861 48.358 114.905 1.00 1.84 O
ATOM 9 C3' A A 351 -22.402 46.421 116.124 1.00 1.84 C
ATOM 10 O3' A A 351 -22.442 45.006 116.095 1.00 1.84 O
ATOM 11 C2' A A 351 -21.070 47.020 115.681 1.00 1.84 C
ATOM 12 O2' A A 351 -20.538 46.316 114.569 1.00 1.84 O
ATOM 13 C1' A A 351 -21.499 48.418 115.221 1.00 1.84 C
ATOM 14 N9 A A 351 -21.333 49.421 116.277 1.00 2.04 N
ATOM 15 C8 A A 351 -22.329 49.975 117.039 1.00 2.04 C
ATOM 16 N7 A A 351 -21.909 50.846 117.920 1.00 2.04 N
ATOM 17 C5 A A 351 -20.535 50.847 117.696 1.00 2.04 C
ATOM 18 C6 A A 351 -19.482 51.542 118.314 1.00 2.04 C
ATOM 19 N6 A A 351 -19.702 52.416 119.313 1.00 2.04 N
ATOM 20 N1 A A 351 -18.214 51.326 117.883 1.00 2.04 N
ATOM 21 C2 A A 351 -18.051 50.461 116.890 1.00 2.04 C
ATOM 22 N3 A A 351 -18.956 49.747 116.241 1.00 2.04 N
ATOM 23 C4 A A 351 -20.177 49.990 116.692 1.00 2.04 C
ATOM 24 P G A 352 -21.467 44.121 117.006 1.00 9.08 P
ATOM 25 OP1 G A 352 -22.300 43.535 118.079 1.00 9.08 O
ATOM 26 OP2 G A 352 -20.274 44.961 117.368 1.00 9.08 O
ATOM 27 O5' G A 352 -21.013 42.995 116.003 1.00 9.08 O
TER
ATOM 1 O3' C B 314 -19.072 52.907 122.283 1.00 15.70 O
ATOM 2 P U B 315 -17.757 53.817 122.215 1.00 12.18 P
ATOM 3 OP1 U B 315 -17.637 54.301 120.827 1.00 12.18 O
ATOM 4 OP2 U B 315 -16.632 53.024 122.803 1.00 12.18 O
ATOM 5 O5' U B 315 -18.125 55.028 123.164 1.00 12.18 O
ATOM 6 C5' U B 315 -18.146 56.349 122.675 1.00 12.18 C
ATOM 7 C4' U B 315 -17.947 57.321 123.790 1.00 12.18 C
ATOM 8 O4' U B 315 -18.549 56.794 124.994 1.00 12.18 O
ATOM 9 C3' U B 315 -16.515 57.569 124.195 1.00 12.18 C
ATOM 10 O3' U B 315 -15.877 58.497 123.367 1.00 12.18 O
ATOM 11 C2' U B 315 -16.654 58.040 125.629 1.00 12.18 C
ATOM 12 O2' U B 315 -17.108 59.385 125.665 1.00 12.18 O
ATOM 13 C1' U B 315 -17.779 57.154 126.118 1.00 12.18 C
ATOM 14 N1 U B 315 -17.296 55.931 126.770 1.00 12.15 N
ATOM 15 C2 U B 315 -16.557 56.095 127.884 1.00 12.15 C
ATOM 16 O2 U B 315 -16.275 57.202 128.261 1.00 12.15 O
ATOM 17 N3 U B 315 -16.168 54.937 128.502 1.00 12.15 N
ATOM 18 C4 U B 315 -16.442 53.644 128.109 1.00 12.15 C
ATOM 19 O4 U B 315 -16.010 52.697 128.771 1.00 12.15 O
ATOM 20 C5 U B 315 -17.232 53.548 126.927 1.00 12.15 C
ATOM 21 C6 U B 315 -17.627 54.674 126.331 1.00 12.15 C
ATOM 22 P G B 316 -14.415 58.190 122.865 1.00 23.37 P
ATOM 23 OP1 G B 316 -14.221 58.945 121.613 1.00 23.37 O
ATOM 24 OP2 G B 316 -14.280 56.728 122.837 1.00 23.37 O
ATOM 25 O5' G B 316 -13.505 58.790 124.025 1.00 23.37 O
TER
ATOM 2 P A A 351 -25.728 47.349 117.967 1.00 1.84 P
ATOM 3 OP1 A A 351 -25.561 48.287 119.092 1.00 1.84 O
ATOM 4 OP2 A A 351 -27.106 46.921 117.591 1.00 1.84 O
ATOM 5 O5' A A 351 -24.977 47.890 116.695 1.00 1.84 O
ATOM 6 C5' A A 351 -24.809 47.068 115.562 1.00 1.84 C
ATOM 7 C4' A A 351 -23.367 47.019 115.133 1.00 1.84 C
ATOM 8 O4' A A 351 -22.861 48.358 114.905 1.00 1.84 O
ATOM 9 C3' A A 351 -22.402 46.421 116.124 1.00 1.84 C
ATOM 10 O3' A A 351 -22.442 45.006 116.095 1.00 1.84 O
ATOM 11 C2' A A 351 -21.070 47.020 115.681 1.00 1.84 C
ATOM 12 O2' A A 351 -20.538 46.316 114.569 1.00 1.84 O
ATOM 13 C1' A A 351 -21.499 48.418 115.221 1.00 1.84 C
ATOM 14 N9 A A 351 -21.333 49.421 116.277 1.00 2.04 N
ATOM 15 C8 A A 351 -22.329 49.975 117.039 1.00 2.04 C
ATOM 16 N7 A A 351 -21.909 50.846 117.920 1.00 2.04 N
ATOM 17 C5 A A 351 -20.535 50.847 117.696 1.00 2.04 C
ATOM 18 C6 A A 351 -19.482 51.542 118.314 1.00 2.04 C
ATOM 19 N6 A A 351 -19.702 52.416 119.313 1.00 2.04 N
ATOM 20 N1 A A 351 -18.214 51.326 117.883 1.00 2.04 N
ATOM 21 C2 A A 351 -18.051 50.461 116.890 1.00 2.04 C
ATOM 22 N3 A A 351 -18.956 49.747 116.241 1.00 2.04 N
ATOM 23 C4 A A 351 -20.177 49.990 116.692 1.00 2.04 C
ATOM 24 P G A 352 -21.467 44.121 117.006 1.00 9.08 P
ATOM 25 OP1 G A 352 -22.300 43.535 118.079 1.00 9.08 O
ATOM 26 OP2 G A 352 -20.274 44.961 117.368 1.00 9.08 O
ATOM 27 O5' G A 352 -21.013 42.995 116.003 1.00 9.08 O
TER
ATOM 1 O3' C B 314 -19.072 52.907 122.283 1.00 15.70 O
ATOM 2 P U B 315 -17.757 53.817 122.215 1.00 12.18 P
ATOM 3 OP1 U B 315 -17.637 54.301 120.827 1.00 12.18 O
ATOM 4 OP2 U B 315 -16.632 53.024 122.803 1.00 12.18 O
ATOM 5 O5' U B 315 -18.125 55.028 123.164 1.00 12.18 O
ATOM 6 C5' U B 315 -18.146 56.349 122.675 1.00 12.18 C
ATOM 7 C4' U B 315 -17.947 57.321 123.790 1.00 12.18 C
ATOM 8 O4' U B 315 -18.549 56.794 124.994 1.00 12.18 O
ATOM 9 C3' U B 315 -16.515 57.569 124.195 1.00 12.18 C
ATOM 10 O3' U B 315 -15.877 58.497 123.367 1.00 12.18 O
ATOM 11 C2' U B 315 -16.654 58.040 125.629 1.00 12.18 C
ATOM 12 O2' U B 315 -17.108 59.385 125.665 1.00 12.18 O
ATOM 13 C1' U B 315 -17.779 57.154 126.118 1.00 12.18 C
ATOM 14 N1 U B 315 -17.296 55.931 126.770 1.00 12.15 N
ATOM 15 C2 U B 315 -16.557 56.095 127.884 1.00 12.15 C
ATOM 16 O2 U B 315 -16.275 57.202 128.261 1.00 12.15 O
ATOM 17 N3 U B 315 -16.168 54.937 128.502 1.00 12.15 N
ATOM 18 C4 U B 315 -16.442 53.644 128.109 1.00 12.15 C
ATOM 19 O4 U B 315 -16.010 52.697 128.771 1.00 12.15 O
ATOM 20 C5 U B 315 -17.232 53.548 126.927 1.00 12.15 C
ATOM 21 C6 U B 315 -17.627 54.674 126.331 1.00 12.15 C
ATOM 22 P G B 316 -14.415 58.190 122.865 1.00 23.37 P
ATOM 23 OP1 G B 316 -14.221 58.945 121.613 1.00 23.37 O
ATOM 24 OP2 G B 316 -14.280 56.728 122.837 1.00 23.37 O
ATOM 25 O5' G B 316 -13.505 58.790 124.025 1.00 23.37 O
TER
Atoms:
OP1: (-25.561,48.287,119.092)
OP2: (-27.106,46.921,117.591)
C3': (-22.402,46.421,116.124)
C1': (-21.499,48.418,115.221)
C5': (-24.809,47.068,115.562)
O4': (-22.861,48.358,114.905)
C8: (-22.329,49.975,117.039)
O2': (-20.538,46.316,114.569)
C6: (-19.482,51.542,118.314)
C5: (-20.535,50.847,117.696)
C4: (-20.177,49.990,116.692)
P: (-25.728,47.349,117.967)
C4': (-23.367,47.019,115.133)
C2': (-21.070,47.020,115.681)
C2: (-18.051,50.461,116.890)
N1: (-18.214,51.326,117.883)
N3: (-18.956,49.747,116.241)
N6: (-19.702,52.416,119.313)
N7: (-21.909,50.846,117.920)
N9: (-21.333,49.421,116.277)
O5': (-24.977,47.890,116.695)
O3': (-22.442,45.006,116.095)
OP2: (-27.106,46.921,117.591)
C3': (-22.402,46.421,116.124)
C1': (-21.499,48.418,115.221)
C5': (-24.809,47.068,115.562)
O4': (-22.861,48.358,114.905)
C8: (-22.329,49.975,117.039)
O2': (-20.538,46.316,114.569)
C6: (-19.482,51.542,118.314)
C5: (-20.535,50.847,117.696)
C4: (-20.177,49.990,116.692)
P: (-25.728,47.349,117.967)
C4': (-23.367,47.019,115.133)
C2': (-21.070,47.020,115.681)
C2: (-18.051,50.461,116.890)
N1: (-18.214,51.326,117.883)
N3: (-18.956,49.747,116.241)
N6: (-19.702,52.416,119.313)
N7: (-21.909,50.846,117.920)
N9: (-21.333,49.421,116.277)
O5': (-24.977,47.890,116.695)
O3': (-22.442,45.006,116.095)
C4: (-16.442,53.644,128.109)
N3: (-16.168,54.937,128.502)
OP1: (-17.637,54.301,120.827)
OP2: (-16.632,53.024,122.803)
C2: (-16.557,56.095,127.884)
C1': (-17.779,57.154,126.118)
C3': (-16.515,57.569,124.195)
O5': (-18.125,55.028,123.164)
O4': (-18.549,56.794,124.994)
C5': (-18.146,56.349,122.675)
P: (-17.757,53.817,122.215)
C4': (-17.947,57.321,123.790)
C2': (-16.654,58.040,125.629)
O2': (-17.108,59.385,125.665)
N1: (-17.296,55.931,126.770)
O4: (-16.010,52.697,128.771)
O2: (-16.275,57.202,128.261)
C6: (-17.627,54.674,126.331)
C5: (-17.232,53.548,126.927)
O3': (-15.877,58.497,123.367)
N3: (-16.168,54.937,128.502)
OP1: (-17.637,54.301,120.827)
OP2: (-16.632,53.024,122.803)
C2: (-16.557,56.095,127.884)
C1': (-17.779,57.154,126.118)
C3': (-16.515,57.569,124.195)
O5': (-18.125,55.028,123.164)
O4': (-18.549,56.794,124.994)
C5': (-18.146,56.349,122.675)
P: (-17.757,53.817,122.215)
C4': (-17.947,57.321,123.790)
C2': (-16.654,58.040,125.629)
O2': (-17.108,59.385,125.665)
N1: (-17.296,55.931,126.770)
O4: (-16.010,52.697,128.771)
O2: (-16.275,57.202,128.261)
C6: (-17.627,54.674,126.331)
C5: (-17.232,53.548,126.927)
O3': (-15.877,58.497,123.367)
Image (generated by PyMOL):