Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1777:A1772
Extra
PDB:
ATOM 1 O3' A A1776 -57.433 -37.711 2.194 1.00 0.01 O
ATOM 2 P A A1777 -55.924 -37.304 2.295 1.00 0.01 P
ATOM 3 OP1 A A1777 -55.399 -37.323 0.957 1.00 0.01 O
ATOM 4 OP2 A A1777 -55.305 -38.167 3.306 1.00 0.01 O
ATOM 5 O5' A A1777 -56.003 -35.818 2.825 1.00 0.01 O
ATOM 6 C5' A A1777 -56.593 -34.811 2.035 1.00 0.01 C
ATOM 7 C4' A A1777 -55.726 -33.599 1.961 1.00 0.01 C
ATOM 8 O4' A A1777 -55.527 -33.113 3.297 1.00 0.01 O
ATOM 9 C3' A A1777 -54.350 -33.831 1.384 1.00 0.01 C
ATOM 10 O3' A A1777 -53.887 -32.657 0.738 1.00 0.01 O
ATOM 11 C2' A A1777 -53.507 -34.101 2.617 1.00 0.01 C
ATOM 12 O2' A A1777 -52.146 -33.747 2.494 1.00 0.01 O
ATOM 13 C1' A A1777 -54.192 -33.262 3.682 1.00 0.01 C
ATOM 14 N9 A A1777 -54.197 -33.912 4.968 1.00 0.01 N
ATOM 15 C8 A A1777 -55.269 -34.545 5.514 1.00 0.01 C
ATOM 16 N7 A A1777 -55.003 -35.081 6.666 1.00 0.01 N
ATOM 17 C5 A A1777 -53.679 -34.798 6.854 1.00 0.01 C
ATOM 18 C6 A A1777 -52.856 -35.130 7.885 1.00 0.01 C
ATOM 19 N6 A A1777 -53.332 -35.814 8.917 1.00 0.01 N
ATOM 20 N1 A A1777 -51.586 -34.742 7.815 1.00 0.01 N
ATOM 21 C2 A A1777 -51.206 -34.055 6.755 1.00 0.01 C
ATOM 22 N3 A A1777 -51.897 -33.682 5.700 1.00 0.01 N
ATOM 23 C4 A A1777 -53.148 -34.093 5.819 1.00 0.01 C
ATOM 24 P A A1778 -54.560 -32.152 -0.620 1.00 0.01 P
ATOM 25 OP1 A A1778 -54.677 -33.295 -1.533 1.00 0.01 O
ATOM 26 OP2 A A1778 -53.806 -30.986 -1.052 1.00 0.01 O
ATOM 27 O5' A A1778 -55.983 -31.708 -0.157 1.00 0.01 O
TER
ATOM 1 O3' U B1771 -53.537 -35.230 12.540 1.00 0.01 O
ATOM 2 P U B1772 -52.547 -36.473 12.319 1.00 0.01 P
ATOM 3 OP1 U B1772 -51.906 -36.772 13.601 1.00 0.01 O
ATOM 4 OP2 U B1772 -51.688 -36.174 11.168 1.00 0.01 O
ATOM 5 O5' U B1772 -53.561 -37.616 11.979 1.00 0.01 O
ATOM 6 C5' U B1772 -54.414 -38.115 12.987 1.00 0.01 C
ATOM 7 C4' U B1772 -55.762 -38.495 12.442 1.00 0.01 C
ATOM 8 O4' U B1772 -56.446 -37.343 11.917 1.00 0.01 O
ATOM 9 C3' U B1772 -55.775 -39.457 11.285 1.00 0.01 C
ATOM 10 O3' U B1772 -55.559 -40.776 11.696 1.00 0.01 O
ATOM 11 C2' U B1772 -57.163 -39.244 10.714 1.00 0.01 C
ATOM 12 O2' U B1772 -58.088 -40.048 11.388 1.00 0.01 O
ATOM 13 C1' U B1772 -57.450 -37.787 11.062 1.00 0.01 C
ATOM 14 N1 U B1772 -57.541 -36.940 9.858 1.00 0.01 N
ATOM 15 C2 U B1772 -58.844 -36.563 9.685 1.00 0.01 C
ATOM 16 O2 U B1772 -59.696 -36.801 10.490 1.00 0.01 O
ATOM 17 N3 U B1772 -59.216 -35.873 8.630 1.00 0.01 N
ATOM 18 C4 U B1772 -58.397 -35.509 7.685 1.00 0.01 C
ATOM 19 O4 U B1772 -58.965 -34.866 6.815 1.00 0.01 O
ATOM 20 C5 U B1772 -57.035 -35.935 7.861 1.00 0.01 C
ATOM 21 C6 U B1772 -56.634 -36.637 8.915 1.00 0.01 C
ATOM 22 P A B1773 -54.419 -41.644 11.042 1.00 0.01 P
ATOM 23 OP1 A B1773 -54.773 -41.860 9.656 1.00 0.01 O
ATOM 24 OP2 A B1773 -54.222 -42.800 11.903 1.00 0.01 O
ATOM 25 O5' A B1773 -53.175 -40.705 11.131 1.00 0.01 O
TER
ATOM 2 P A A1777 -55.924 -37.304 2.295 1.00 0.01 P
ATOM 3 OP1 A A1777 -55.399 -37.323 0.957 1.00 0.01 O
ATOM 4 OP2 A A1777 -55.305 -38.167 3.306 1.00 0.01 O
ATOM 5 O5' A A1777 -56.003 -35.818 2.825 1.00 0.01 O
ATOM 6 C5' A A1777 -56.593 -34.811 2.035 1.00 0.01 C
ATOM 7 C4' A A1777 -55.726 -33.599 1.961 1.00 0.01 C
ATOM 8 O4' A A1777 -55.527 -33.113 3.297 1.00 0.01 O
ATOM 9 C3' A A1777 -54.350 -33.831 1.384 1.00 0.01 C
ATOM 10 O3' A A1777 -53.887 -32.657 0.738 1.00 0.01 O
ATOM 11 C2' A A1777 -53.507 -34.101 2.617 1.00 0.01 C
ATOM 12 O2' A A1777 -52.146 -33.747 2.494 1.00 0.01 O
ATOM 13 C1' A A1777 -54.192 -33.262 3.682 1.00 0.01 C
ATOM 14 N9 A A1777 -54.197 -33.912 4.968 1.00 0.01 N
ATOM 15 C8 A A1777 -55.269 -34.545 5.514 1.00 0.01 C
ATOM 16 N7 A A1777 -55.003 -35.081 6.666 1.00 0.01 N
ATOM 17 C5 A A1777 -53.679 -34.798 6.854 1.00 0.01 C
ATOM 18 C6 A A1777 -52.856 -35.130 7.885 1.00 0.01 C
ATOM 19 N6 A A1777 -53.332 -35.814 8.917 1.00 0.01 N
ATOM 20 N1 A A1777 -51.586 -34.742 7.815 1.00 0.01 N
ATOM 21 C2 A A1777 -51.206 -34.055 6.755 1.00 0.01 C
ATOM 22 N3 A A1777 -51.897 -33.682 5.700 1.00 0.01 N
ATOM 23 C4 A A1777 -53.148 -34.093 5.819 1.00 0.01 C
ATOM 24 P A A1778 -54.560 -32.152 -0.620 1.00 0.01 P
ATOM 25 OP1 A A1778 -54.677 -33.295 -1.533 1.00 0.01 O
ATOM 26 OP2 A A1778 -53.806 -30.986 -1.052 1.00 0.01 O
ATOM 27 O5' A A1778 -55.983 -31.708 -0.157 1.00 0.01 O
TER
ATOM 1 O3' U B1771 -53.537 -35.230 12.540 1.00 0.01 O
ATOM 2 P U B1772 -52.547 -36.473 12.319 1.00 0.01 P
ATOM 3 OP1 U B1772 -51.906 -36.772 13.601 1.00 0.01 O
ATOM 4 OP2 U B1772 -51.688 -36.174 11.168 1.00 0.01 O
ATOM 5 O5' U B1772 -53.561 -37.616 11.979 1.00 0.01 O
ATOM 6 C5' U B1772 -54.414 -38.115 12.987 1.00 0.01 C
ATOM 7 C4' U B1772 -55.762 -38.495 12.442 1.00 0.01 C
ATOM 8 O4' U B1772 -56.446 -37.343 11.917 1.00 0.01 O
ATOM 9 C3' U B1772 -55.775 -39.457 11.285 1.00 0.01 C
ATOM 10 O3' U B1772 -55.559 -40.776 11.696 1.00 0.01 O
ATOM 11 C2' U B1772 -57.163 -39.244 10.714 1.00 0.01 C
ATOM 12 O2' U B1772 -58.088 -40.048 11.388 1.00 0.01 O
ATOM 13 C1' U B1772 -57.450 -37.787 11.062 1.00 0.01 C
ATOM 14 N1 U B1772 -57.541 -36.940 9.858 1.00 0.01 N
ATOM 15 C2 U B1772 -58.844 -36.563 9.685 1.00 0.01 C
ATOM 16 O2 U B1772 -59.696 -36.801 10.490 1.00 0.01 O
ATOM 17 N3 U B1772 -59.216 -35.873 8.630 1.00 0.01 N
ATOM 18 C4 U B1772 -58.397 -35.509 7.685 1.00 0.01 C
ATOM 19 O4 U B1772 -58.965 -34.866 6.815 1.00 0.01 O
ATOM 20 C5 U B1772 -57.035 -35.935 7.861 1.00 0.01 C
ATOM 21 C6 U B1772 -56.634 -36.637 8.915 1.00 0.01 C
ATOM 22 P A B1773 -54.419 -41.644 11.042 1.00 0.01 P
ATOM 23 OP1 A B1773 -54.773 -41.860 9.656 1.00 0.01 O
ATOM 24 OP2 A B1773 -54.222 -42.800 11.903 1.00 0.01 O
ATOM 25 O5' A B1773 -53.175 -40.705 11.131 1.00 0.01 O
TER
Atoms:
OP1: (-55.399,-37.323,0.957)
OP2: (-55.305,-38.167,3.306)
C3': (-54.350,-33.831,1.384)
C1': (-54.192,-33.262,3.682)
C5': (-56.593,-34.811,2.035)
O4': (-55.527,-33.113,3.297)
C8: (-55.269,-34.545,5.514)
O2': (-52.146,-33.747,2.494)
C6: (-52.856,-35.130,7.885)
C5: (-53.679,-34.798,6.854)
C4: (-53.148,-34.093,5.819)
P: (-55.924,-37.304,2.295)
C4': (-55.726,-33.599,1.961)
C2': (-53.507,-34.101,2.617)
C2: (-51.206,-34.055,6.755)
N1: (-51.586,-34.742,7.815)
N3: (-51.897,-33.682,5.700)
N6: (-53.332,-35.814,8.917)
N7: (-55.003,-35.081,6.666)
N9: (-54.197,-33.912,4.968)
O5': (-56.003,-35.818,2.825)
O3': (-53.887,-32.657,0.738)
OP2: (-55.305,-38.167,3.306)
C3': (-54.350,-33.831,1.384)
C1': (-54.192,-33.262,3.682)
C5': (-56.593,-34.811,2.035)
O4': (-55.527,-33.113,3.297)
C8: (-55.269,-34.545,5.514)
O2': (-52.146,-33.747,2.494)
C6: (-52.856,-35.130,7.885)
C5: (-53.679,-34.798,6.854)
C4: (-53.148,-34.093,5.819)
P: (-55.924,-37.304,2.295)
C4': (-55.726,-33.599,1.961)
C2': (-53.507,-34.101,2.617)
C2: (-51.206,-34.055,6.755)
N1: (-51.586,-34.742,7.815)
N3: (-51.897,-33.682,5.700)
N6: (-53.332,-35.814,8.917)
N7: (-55.003,-35.081,6.666)
N9: (-54.197,-33.912,4.968)
O5': (-56.003,-35.818,2.825)
O3': (-53.887,-32.657,0.738)
C4: (-58.397,-35.509,7.685)
N3: (-59.216,-35.873,8.630)
OP1: (-51.906,-36.772,13.601)
OP2: (-51.688,-36.174,11.168)
C2: (-58.844,-36.563,9.685)
C1': (-57.450,-37.787,11.062)
C3': (-55.775,-39.457,11.285)
O5': (-53.561,-37.616,11.979)
O4': (-56.446,-37.343,11.917)
C5': (-54.414,-38.115,12.987)
P: (-52.547,-36.473,12.319)
C4': (-55.762,-38.495,12.442)
C2': (-57.163,-39.244,10.714)
O2': (-58.088,-40.048,11.388)
N1: (-57.541,-36.940,9.858)
O4: (-58.965,-34.866,6.815)
O2: (-59.696,-36.801,10.490)
C6: (-56.634,-36.637,8.915)
C5: (-57.035,-35.935,7.861)
O3': (-55.559,-40.776,11.696)
N3: (-59.216,-35.873,8.630)
OP1: (-51.906,-36.772,13.601)
OP2: (-51.688,-36.174,11.168)
C2: (-58.844,-36.563,9.685)
C1': (-57.450,-37.787,11.062)
C3': (-55.775,-39.457,11.285)
O5': (-53.561,-37.616,11.979)
O4': (-56.446,-37.343,11.917)
C5': (-54.414,-38.115,12.987)
P: (-52.547,-36.473,12.319)
C4': (-55.762,-38.495,12.442)
C2': (-57.163,-39.244,10.714)
O2': (-58.088,-40.048,11.388)
N1: (-57.541,-36.940,9.858)
O4: (-58.965,-34.866,6.815)
O2: (-59.696,-36.801,10.490)
C6: (-56.634,-36.637,8.915)
C5: (-57.035,-35.935,7.861)
O3': (-55.559,-40.776,11.696)
Image (generated by PyMOL):