Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2423:A2238
Extra
PDB:
ATOM 1 O3' G A2422 -99.415 -49.072 36.886 1.00 0.01 O
ATOM 2 P A A2423 -98.257 -49.865 36.124 1.00 0.14 P
ATOM 3 OP1 A A2423 -97.541 -48.876 35.268 1.00 0.14 O
ATOM 4 OP2 A A2423 -98.864 -51.072 35.499 1.00 0.14 O
ATOM 5 O5' A A2423 -97.354 -50.308 37.300 1.00 0.14 O
ATOM 6 C5' A A2423 -96.370 -49.452 37.769 1.00 0.14 C
ATOM 7 C4' A A2423 -95.134 -50.214 37.987 1.00 0.14 C
ATOM 8 O4' A A2423 -94.530 -50.487 36.739 1.00 0.14 O
ATOM 9 C3' A A2423 -94.063 -49.531 38.791 1.00 0.14 C
ATOM 10 O3' A A2423 -94.241 -49.773 40.176 1.00 0.14 O
ATOM 11 C2' A A2423 -92.770 -50.131 38.241 1.00 0.14 C
ATOM 12 O2' A A2423 -92.246 -51.087 39.145 1.00 0.14 O
ATOM 13 C1' A A2423 -93.237 -50.860 36.977 1.00 0.14 C
ATOM 14 N9 A A2423 -92.439 -50.572 35.800 1.00 0.01 N
ATOM 15 C8 A A2423 -91.990 -51.526 34.939 1.00 0.01 C
ATOM 16 N7 A A2423 -91.273 -51.014 33.968 1.00 0.01 N
ATOM 17 C5 A A2423 -91.272 -49.650 34.230 1.00 0.01 C
ATOM 18 C6 A A2423 -90.710 -48.572 33.571 1.00 0.01 C
ATOM 19 N6 A A2423 -89.990 -48.667 32.455 1.00 0.01 N
ATOM 20 N1 A A2423 -90.919 -47.374 34.117 1.00 0.01 N
ATOM 21 C2 A A2423 -91.633 -47.251 35.217 1.00 0.01 C
ATOM 22 N3 A A2423 -92.235 -48.173 35.922 1.00 0.01 N
ATOM 23 C4 A A2423 -92.003 -49.359 35.363 1.00 0.01 C
ATOM 24 P U A2424 -94.861 -48.657 41.141 1.00 0.01 P
ATOM 25 OP1 U A2424 -94.889 -49.230 42.520 1.00 0.01 O
ATOM 26 OP2 U A2424 -96.114 -48.186 40.547 1.00 0.01 O
ATOM 27 O5' U A2424 -93.768 -47.518 41.037 1.00 0.01 O
TER
ATOM 1 O3' U B2237 -87.360 -45.854 31.482 1.00 0.01 O
ATOM 2 P U B2238 -87.836 -46.334 30.054 1.00 0.01 P
ATOM 3 OP1 U B2238 -89.155 -46.963 30.236 1.00 0.01 O
ATOM 4 OP2 U B2238 -86.772 -47.109 29.469 1.00 0.01 O
ATOM 5 O5' U B2238 -87.978 -45.000 29.280 1.00 0.01 O
ATOM 6 C5' U B2238 -89.246 -44.451 29.070 1.00 0.01 C
ATOM 7 C4' U B2238 -89.170 -43.275 28.155 1.00 0.01 C
ATOM 8 O4' U B2238 -88.027 -42.480 28.489 1.00 0.01 O
ATOM 9 C3' U B2238 -88.989 -43.603 26.704 1.00 0.01 C
ATOM 10 O3' U B2238 -90.220 -43.887 26.100 1.00 0.01 O
ATOM 11 C2' U B2238 -88.366 -42.356 26.162 1.00 0.01 C
ATOM 12 O2' U B2238 -89.386 -41.435 25.869 1.00 0.01 O
ATOM 13 C1' U B2238 -87.566 -41.838 27.358 1.00 0.01 C
ATOM 14 N1 U B2238 -86.142 -42.091 27.264 1.00 0.01 N
ATOM 15 C2 U B2238 -85.404 -41.147 26.641 1.00 0.01 C
ATOM 16 O2 U B2238 -85.912 -40.199 26.140 1.00 0.01 O
ATOM 17 N3 U B2238 -84.085 -41.342 26.589 1.00 0.01 N
ATOM 18 C4 U B2238 -83.428 -42.399 27.126 1.00 0.01 C
ATOM 19 O4 U B2238 -82.195 -42.453 26.984 1.00 0.01 O
ATOM 20 C5 U B2238 -84.273 -43.348 27.794 1.00 0.01 C
ATOM 21 C6 U B2238 -85.580 -43.152 27.860 1.00 0.01 C
ATOM 22 P G B2239 -90.296 -44.888 24.870 1.00 0.01 P
ATOM 23 OP1 G B2239 -88.932 -45.455 24.694 1.00 0.01 O
ATOM 24 OP2 G B2239 -90.923 -44.152 23.763 1.00 0.01 O
ATOM 25 O5' G B2239 -91.260 -46.009 25.386 1.00 0.01 O
TER
ATOM 2 P A A2423 -98.257 -49.865 36.124 1.00 0.14 P
ATOM 3 OP1 A A2423 -97.541 -48.876 35.268 1.00 0.14 O
ATOM 4 OP2 A A2423 -98.864 -51.072 35.499 1.00 0.14 O
ATOM 5 O5' A A2423 -97.354 -50.308 37.300 1.00 0.14 O
ATOM 6 C5' A A2423 -96.370 -49.452 37.769 1.00 0.14 C
ATOM 7 C4' A A2423 -95.134 -50.214 37.987 1.00 0.14 C
ATOM 8 O4' A A2423 -94.530 -50.487 36.739 1.00 0.14 O
ATOM 9 C3' A A2423 -94.063 -49.531 38.791 1.00 0.14 C
ATOM 10 O3' A A2423 -94.241 -49.773 40.176 1.00 0.14 O
ATOM 11 C2' A A2423 -92.770 -50.131 38.241 1.00 0.14 C
ATOM 12 O2' A A2423 -92.246 -51.087 39.145 1.00 0.14 O
ATOM 13 C1' A A2423 -93.237 -50.860 36.977 1.00 0.14 C
ATOM 14 N9 A A2423 -92.439 -50.572 35.800 1.00 0.01 N
ATOM 15 C8 A A2423 -91.990 -51.526 34.939 1.00 0.01 C
ATOM 16 N7 A A2423 -91.273 -51.014 33.968 1.00 0.01 N
ATOM 17 C5 A A2423 -91.272 -49.650 34.230 1.00 0.01 C
ATOM 18 C6 A A2423 -90.710 -48.572 33.571 1.00 0.01 C
ATOM 19 N6 A A2423 -89.990 -48.667 32.455 1.00 0.01 N
ATOM 20 N1 A A2423 -90.919 -47.374 34.117 1.00 0.01 N
ATOM 21 C2 A A2423 -91.633 -47.251 35.217 1.00 0.01 C
ATOM 22 N3 A A2423 -92.235 -48.173 35.922 1.00 0.01 N
ATOM 23 C4 A A2423 -92.003 -49.359 35.363 1.00 0.01 C
ATOM 24 P U A2424 -94.861 -48.657 41.141 1.00 0.01 P
ATOM 25 OP1 U A2424 -94.889 -49.230 42.520 1.00 0.01 O
ATOM 26 OP2 U A2424 -96.114 -48.186 40.547 1.00 0.01 O
ATOM 27 O5' U A2424 -93.768 -47.518 41.037 1.00 0.01 O
TER
ATOM 1 O3' U B2237 -87.360 -45.854 31.482 1.00 0.01 O
ATOM 2 P U B2238 -87.836 -46.334 30.054 1.00 0.01 P
ATOM 3 OP1 U B2238 -89.155 -46.963 30.236 1.00 0.01 O
ATOM 4 OP2 U B2238 -86.772 -47.109 29.469 1.00 0.01 O
ATOM 5 O5' U B2238 -87.978 -45.000 29.280 1.00 0.01 O
ATOM 6 C5' U B2238 -89.246 -44.451 29.070 1.00 0.01 C
ATOM 7 C4' U B2238 -89.170 -43.275 28.155 1.00 0.01 C
ATOM 8 O4' U B2238 -88.027 -42.480 28.489 1.00 0.01 O
ATOM 9 C3' U B2238 -88.989 -43.603 26.704 1.00 0.01 C
ATOM 10 O3' U B2238 -90.220 -43.887 26.100 1.00 0.01 O
ATOM 11 C2' U B2238 -88.366 -42.356 26.162 1.00 0.01 C
ATOM 12 O2' U B2238 -89.386 -41.435 25.869 1.00 0.01 O
ATOM 13 C1' U B2238 -87.566 -41.838 27.358 1.00 0.01 C
ATOM 14 N1 U B2238 -86.142 -42.091 27.264 1.00 0.01 N
ATOM 15 C2 U B2238 -85.404 -41.147 26.641 1.00 0.01 C
ATOM 16 O2 U B2238 -85.912 -40.199 26.140 1.00 0.01 O
ATOM 17 N3 U B2238 -84.085 -41.342 26.589 1.00 0.01 N
ATOM 18 C4 U B2238 -83.428 -42.399 27.126 1.00 0.01 C
ATOM 19 O4 U B2238 -82.195 -42.453 26.984 1.00 0.01 O
ATOM 20 C5 U B2238 -84.273 -43.348 27.794 1.00 0.01 C
ATOM 21 C6 U B2238 -85.580 -43.152 27.860 1.00 0.01 C
ATOM 22 P G B2239 -90.296 -44.888 24.870 1.00 0.01 P
ATOM 23 OP1 G B2239 -88.932 -45.455 24.694 1.00 0.01 O
ATOM 24 OP2 G B2239 -90.923 -44.152 23.763 1.00 0.01 O
ATOM 25 O5' G B2239 -91.260 -46.009 25.386 1.00 0.01 O
TER
Atoms:
OP1: (-97.541,-48.876,35.268)
OP2: (-98.864,-51.072,35.499)
C3': (-94.063,-49.531,38.791)
C1': (-93.237,-50.860,36.977)
C5': (-96.370,-49.452,37.769)
O4': (-94.530,-50.487,36.739)
C8: (-91.990,-51.526,34.939)
O2': (-92.246,-51.087,39.145)
C6: (-90.710,-48.572,33.571)
C5: (-91.272,-49.650,34.230)
C4: (-92.003,-49.359,35.363)
P: (-98.257,-49.865,36.124)
C4': (-95.134,-50.214,37.987)
C2': (-92.770,-50.131,38.241)
C2: (-91.633,-47.251,35.217)
N1: (-90.919,-47.374,34.117)
N3: (-92.235,-48.173,35.922)
N6: (-89.990,-48.667,32.455)
N7: (-91.273,-51.014,33.968)
N9: (-92.439,-50.572,35.800)
O5': (-97.354,-50.308,37.300)
O3': (-94.241,-49.773,40.176)
OP2: (-98.864,-51.072,35.499)
C3': (-94.063,-49.531,38.791)
C1': (-93.237,-50.860,36.977)
C5': (-96.370,-49.452,37.769)
O4': (-94.530,-50.487,36.739)
C8: (-91.990,-51.526,34.939)
O2': (-92.246,-51.087,39.145)
C6: (-90.710,-48.572,33.571)
C5: (-91.272,-49.650,34.230)
C4: (-92.003,-49.359,35.363)
P: (-98.257,-49.865,36.124)
C4': (-95.134,-50.214,37.987)
C2': (-92.770,-50.131,38.241)
C2: (-91.633,-47.251,35.217)
N1: (-90.919,-47.374,34.117)
N3: (-92.235,-48.173,35.922)
N6: (-89.990,-48.667,32.455)
N7: (-91.273,-51.014,33.968)
N9: (-92.439,-50.572,35.800)
O5': (-97.354,-50.308,37.300)
O3': (-94.241,-49.773,40.176)
C4: (-83.428,-42.399,27.126)
N3: (-84.085,-41.342,26.589)
OP1: (-89.155,-46.963,30.236)
OP2: (-86.772,-47.109,29.469)
C2: (-85.404,-41.147,26.641)
C1': (-87.566,-41.838,27.358)
C3': (-88.989,-43.603,26.704)
O5': (-87.978,-45.000,29.280)
O4': (-88.027,-42.480,28.489)
C5': (-89.246,-44.451,29.070)
P: (-87.836,-46.334,30.054)
C4': (-89.170,-43.275,28.155)
C2': (-88.366,-42.356,26.162)
O2': (-89.386,-41.435,25.869)
N1: (-86.142,-42.091,27.264)
O4: (-82.195,-42.453,26.984)
O2: (-85.912,-40.199,26.140)
C6: (-85.580,-43.152,27.860)
C5: (-84.273,-43.348,27.794)
O3': (-90.220,-43.887,26.100)
N3: (-84.085,-41.342,26.589)
OP1: (-89.155,-46.963,30.236)
OP2: (-86.772,-47.109,29.469)
C2: (-85.404,-41.147,26.641)
C1': (-87.566,-41.838,27.358)
C3': (-88.989,-43.603,26.704)
O5': (-87.978,-45.000,29.280)
O4': (-88.027,-42.480,28.489)
C5': (-89.246,-44.451,29.070)
P: (-87.836,-46.334,30.054)
C4': (-89.170,-43.275,28.155)
C2': (-88.366,-42.356,26.162)
O2': (-89.386,-41.435,25.869)
N1: (-86.142,-42.091,27.264)
O4: (-82.195,-42.453,26.984)
O2: (-85.912,-40.199,26.140)
C6: (-85.580,-43.152,27.860)
C5: (-84.273,-43.348,27.794)
O3': (-90.220,-43.887,26.100)
Image (generated by PyMOL):