Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21565:21594
Extra
PDB:
ATOM 1 O3' U A1564 -82.462 -57.750 78.811 1.00 89.10 O
ATOM 2 P A A1565 -83.943 -57.228 78.531 1.00 98.60 P
ATOM 3 OP1 A A1565 -83.831 -56.210 77.466 1.00 97.91 O
ATOM 4 OP2 A A1565 -84.539 -56.835 79.849 1.00 99.11 O
ATOM 5 O5' A A1565 -84.670 -58.531 77.964 1.00 99.19 O
ATOM 6 C5' A A1565 -84.438 -58.968 76.622 1.00 98.86 C
ATOM 7 C4' A A1565 -84.997 -60.351 76.357 1.00 99.51 C
ATOM 8 O4' A A1565 -84.014 -61.355 76.743 1.00 99.55 O
ATOM 9 C3' A A1565 -86.270 -60.701 77.117 1.00100.40 C
ATOM 10 O3' A A1565 -87.043 -61.619 76.326 1.00100.84 O
ATOM 11 C2' A A1565 -85.699 -61.437 78.322 1.00100.77 C
ATOM 12 O2' A A1565 -86.617 -62.251 79.013 1.00101.69 O
ATOM 13 C1' A A1565 -84.615 -62.249 77.641 1.00100.40 C
ATOM 14 N9 A A1565 -83.599 -62.793 78.537 1.00100.45 N
ATOM 15 C8 A A1565 -82.591 -62.184 79.217 1.00100.03 C
ATOM 16 N7 A A1565 -81.880 -63.013 79.949 1.00100.30 N
ATOM 17 C5 A A1565 -82.444 -64.259 79.731 1.00100.93 C
ATOM 18 C6 A A1565 -82.162 -65.567 80.212 1.00101.51 C
ATOM 19 N6 A A1565 -81.174 -65.862 81.062 1.00101.54 N
ATOM 20 N1 A A1565 -82.938 -66.602 79.810 1.00102.10 N
ATOM 21 C2 A A1565 -83.940 -66.327 78.966 1.00102.11 C
ATOM 22 N3 A A1565 -84.303 -65.147 78.447 1.00101.62 N
ATOM 23 C4 A A1565 -83.504 -64.132 78.863 1.00101.03 C
ATOM 24 P G A1566 -88.579 -61.315 75.925 1.00 89.48 P
ATOM 25 OP1 G A1566 -88.817 -59.880 76.112 1.00 89.16 O
ATOM 26 OP2 G A1566 -89.403 -62.251 76.679 1.00 90.42 O
ATOM 27 O5' G A1566 -88.610 -61.661 74.351 1.00 89.19 O
TER
ATOM 1 O3' A B1593 -79.923 -69.938 82.053 1.00105.90 O
ATOM 2 P U B1594 -79.886 -68.985 83.357 1.00103.58 P
ATOM 3 OP1 U B1594 -80.317 -69.796 84.510 1.00104.55 O
ATOM 4 OP2 U B1594 -80.645 -67.766 83.026 1.00103.20 O
ATOM 5 O5' U B1594 -78.348 -68.641 83.504 1.00102.95 O
ATOM 6 C5' U B1594 -77.455 -69.561 84.107 1.00103.29 C
ATOM 7 C4' U B1594 -76.066 -68.980 84.261 1.00102.63 C
ATOM 8 O4' U B1594 -75.557 -68.531 82.974 1.00101.77 O
ATOM 9 C3' U B1594 -75.940 -67.744 85.119 1.00102.37 C
ATOM 10 O3' U B1594 -76.003 -68.011 86.501 1.00103.06 O
ATOM 11 C2' U B1594 -74.597 -67.211 84.664 1.00101.53 C
ATOM 12 O2' U B1594 -73.556 -68.052 85.130 1.00101.78 O
ATOM 13 C1' U B1594 -74.715 -67.410 83.167 1.00101.08 C
ATOM 14 N1 U B1594 -75.325 -66.237 82.501 1.00100.51 N
ATOM 15 C2 U B1594 -74.636 -65.042 82.399 1.00 99.74 C
ATOM 16 O2 U B1594 -73.519 -64.859 82.851 1.00 99.48 O
ATOM 17 N3 U B1594 -75.306 -64.031 81.751 1.00 99.30 N
ATOM 18 C4 U B1594 -76.568 -64.095 81.195 1.00 99.55 C
ATOM 19 O4 U B1594 -77.064 -63.118 80.642 1.00 99.14 O
ATOM 20 C5 U B1594 -77.210 -65.347 81.345 1.00100.34 C
ATOM 21 C6 U B1594 -76.580 -66.339 81.971 1.00100.77 C
ATOM 22 P U B1595 -76.840 -67.038 87.469 1.00110.03 P
ATOM 23 OP1 U B1595 -76.529 -67.447 88.854 1.00110.70 O
ATOM 24 OP2 U B1595 -78.246 -67.078 87.024 1.00110.34 O
ATOM 25 O5' U B1595 -76.225 -65.595 87.156 1.00109.05 O
TER
ATOM 2 P A A1565 -83.943 -57.228 78.531 1.00 98.60 P
ATOM 3 OP1 A A1565 -83.831 -56.210 77.466 1.00 97.91 O
ATOM 4 OP2 A A1565 -84.539 -56.835 79.849 1.00 99.11 O
ATOM 5 O5' A A1565 -84.670 -58.531 77.964 1.00 99.19 O
ATOM 6 C5' A A1565 -84.438 -58.968 76.622 1.00 98.86 C
ATOM 7 C4' A A1565 -84.997 -60.351 76.357 1.00 99.51 C
ATOM 8 O4' A A1565 -84.014 -61.355 76.743 1.00 99.55 O
ATOM 9 C3' A A1565 -86.270 -60.701 77.117 1.00100.40 C
ATOM 10 O3' A A1565 -87.043 -61.619 76.326 1.00100.84 O
ATOM 11 C2' A A1565 -85.699 -61.437 78.322 1.00100.77 C
ATOM 12 O2' A A1565 -86.617 -62.251 79.013 1.00101.69 O
ATOM 13 C1' A A1565 -84.615 -62.249 77.641 1.00100.40 C
ATOM 14 N9 A A1565 -83.599 -62.793 78.537 1.00100.45 N
ATOM 15 C8 A A1565 -82.591 -62.184 79.217 1.00100.03 C
ATOM 16 N7 A A1565 -81.880 -63.013 79.949 1.00100.30 N
ATOM 17 C5 A A1565 -82.444 -64.259 79.731 1.00100.93 C
ATOM 18 C6 A A1565 -82.162 -65.567 80.212 1.00101.51 C
ATOM 19 N6 A A1565 -81.174 -65.862 81.062 1.00101.54 N
ATOM 20 N1 A A1565 -82.938 -66.602 79.810 1.00102.10 N
ATOM 21 C2 A A1565 -83.940 -66.327 78.966 1.00102.11 C
ATOM 22 N3 A A1565 -84.303 -65.147 78.447 1.00101.62 N
ATOM 23 C4 A A1565 -83.504 -64.132 78.863 1.00101.03 C
ATOM 24 P G A1566 -88.579 -61.315 75.925 1.00 89.48 P
ATOM 25 OP1 G A1566 -88.817 -59.880 76.112 1.00 89.16 O
ATOM 26 OP2 G A1566 -89.403 -62.251 76.679 1.00 90.42 O
ATOM 27 O5' G A1566 -88.610 -61.661 74.351 1.00 89.19 O
TER
ATOM 1 O3' A B1593 -79.923 -69.938 82.053 1.00105.90 O
ATOM 2 P U B1594 -79.886 -68.985 83.357 1.00103.58 P
ATOM 3 OP1 U B1594 -80.317 -69.796 84.510 1.00104.55 O
ATOM 4 OP2 U B1594 -80.645 -67.766 83.026 1.00103.20 O
ATOM 5 O5' U B1594 -78.348 -68.641 83.504 1.00102.95 O
ATOM 6 C5' U B1594 -77.455 -69.561 84.107 1.00103.29 C
ATOM 7 C4' U B1594 -76.066 -68.980 84.261 1.00102.63 C
ATOM 8 O4' U B1594 -75.557 -68.531 82.974 1.00101.77 O
ATOM 9 C3' U B1594 -75.940 -67.744 85.119 1.00102.37 C
ATOM 10 O3' U B1594 -76.003 -68.011 86.501 1.00103.06 O
ATOM 11 C2' U B1594 -74.597 -67.211 84.664 1.00101.53 C
ATOM 12 O2' U B1594 -73.556 -68.052 85.130 1.00101.78 O
ATOM 13 C1' U B1594 -74.715 -67.410 83.167 1.00101.08 C
ATOM 14 N1 U B1594 -75.325 -66.237 82.501 1.00100.51 N
ATOM 15 C2 U B1594 -74.636 -65.042 82.399 1.00 99.74 C
ATOM 16 O2 U B1594 -73.519 -64.859 82.851 1.00 99.48 O
ATOM 17 N3 U B1594 -75.306 -64.031 81.751 1.00 99.30 N
ATOM 18 C4 U B1594 -76.568 -64.095 81.195 1.00 99.55 C
ATOM 19 O4 U B1594 -77.064 -63.118 80.642 1.00 99.14 O
ATOM 20 C5 U B1594 -77.210 -65.347 81.345 1.00100.34 C
ATOM 21 C6 U B1594 -76.580 -66.339 81.971 1.00100.77 C
ATOM 22 P U B1595 -76.840 -67.038 87.469 1.00110.03 P
ATOM 23 OP1 U B1595 -76.529 -67.447 88.854 1.00110.70 O
ATOM 24 OP2 U B1595 -78.246 -67.078 87.024 1.00110.34 O
ATOM 25 O5' U B1595 -76.225 -65.595 87.156 1.00109.05 O
TER
Atoms:
OP1: (-83.831,-56.210,77.466)
OP2: (-84.539,-56.835,79.849)
C3': (-86.270,-60.701,77.117)
C1': (-84.615,-62.249,77.641)
C5': (-84.438,-58.968,76.622)
O4': (-84.014,-61.355,76.743)
C8: (-82.591,-62.184,79.217)
O2': (-86.617,-62.251,79.013)
C6: (-82.162,-65.567,80.212)
C5: (-82.444,-64.259,79.731)
C4: (-83.504,-64.132,78.863)
P: (-83.943,-57.228,78.531)
C4': (-84.997,-60.351,76.357)
C2': (-85.699,-61.437,78.322)
C2: (-83.940,-66.327,78.966)
N1: (-82.938,-66.602,79.810)
N3: (-84.303,-65.147,78.447)
N6: (-81.174,-65.862,81.062)
N7: (-81.880,-63.013,79.949)
N9: (-83.599,-62.793,78.537)
O5': (-84.670,-58.531,77.964)
O3': (-87.043,-61.619,76.326)
OP2: (-84.539,-56.835,79.849)
C3': (-86.270,-60.701,77.117)
C1': (-84.615,-62.249,77.641)
C5': (-84.438,-58.968,76.622)
O4': (-84.014,-61.355,76.743)
C8: (-82.591,-62.184,79.217)
O2': (-86.617,-62.251,79.013)
C6: (-82.162,-65.567,80.212)
C5: (-82.444,-64.259,79.731)
C4: (-83.504,-64.132,78.863)
P: (-83.943,-57.228,78.531)
C4': (-84.997,-60.351,76.357)
C2': (-85.699,-61.437,78.322)
C2: (-83.940,-66.327,78.966)
N1: (-82.938,-66.602,79.810)
N3: (-84.303,-65.147,78.447)
N6: (-81.174,-65.862,81.062)
N7: (-81.880,-63.013,79.949)
N9: (-83.599,-62.793,78.537)
O5': (-84.670,-58.531,77.964)
O3': (-87.043,-61.619,76.326)
C4: (-76.568,-64.095,81.195)
N3: (-75.306,-64.031,81.751)
OP1: (-80.317,-69.796,84.510)
OP2: (-80.645,-67.766,83.026)
C2: (-74.636,-65.042,82.399)
C1': (-74.715,-67.410,83.167)
C3': (-75.940,-67.744,85.119)
O5': (-78.348,-68.641,83.504)
O4': (-75.557,-68.531,82.974)
C5': (-77.455,-69.561,84.107)
P: (-79.886,-68.985,83.357)
C4': (-76.066,-68.980,84.261)
C2': (-74.597,-67.211,84.664)
O2': (-73.556,-68.052,85.130)
N1: (-75.325,-66.237,82.501)
O4: (-77.064,-63.118,80.642)
O2: (-73.519,-64.859,82.851)
C6: (-76.580,-66.339,81.971)
C5: (-77.210,-65.347,81.345)
O3': (-76.003,-68.011,86.501)
N3: (-75.306,-64.031,81.751)
OP1: (-80.317,-69.796,84.510)
OP2: (-80.645,-67.766,83.026)
C2: (-74.636,-65.042,82.399)
C1': (-74.715,-67.410,83.167)
C3': (-75.940,-67.744,85.119)
O5': (-78.348,-68.641,83.504)
O4': (-75.557,-68.531,82.974)
C5': (-77.455,-69.561,84.107)
P: (-79.886,-68.985,83.357)
C4': (-76.066,-68.980,84.261)
C2': (-74.597,-67.211,84.664)
O2': (-73.556,-68.052,85.130)
N1: (-75.325,-66.237,82.501)
O4: (-77.064,-63.118,80.642)
O2: (-73.519,-64.859,82.851)
C6: (-76.580,-66.339,81.971)
C5: (-77.210,-65.347,81.345)
O3': (-76.003,-68.011,86.501)
Image (generated by PyMOL):