Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11949:11944
Extra
PDB:
ATOM 1 O3' U A1948 13.222 14.990 83.864 1.00 39.42 O
ATOM 2 P A A1949 13.264 16.155 84.963 1.00 42.43 P
ATOM 3 OP1 A A1949 13.020 17.416 84.283 1.00 42.61 O
ATOM 4 OP2 A A1949 14.512 16.010 85.710 1.00 42.33 O
ATOM 5 O5' A A1949 12.067 15.769 85.916 1.00 42.63 O
ATOM 6 C5' A A1949 10.816 15.334 85.435 1.00 42.67 C
ATOM 7 C4' A A1949 9.761 15.801 86.361 1.00 43.00 C
ATOM 8 O4' A A1949 9.911 15.077 87.602 1.00 43.01 O
ATOM 9 C3' A A1949 9.905 17.267 86.711 1.00 43.28 C
ATOM 10 O3' A A1949 8.639 17.827 87.044 1.00 43.61 O
ATOM 11 C2' A A1949 10.789 17.233 87.946 1.00 43.30 C
ATOM 12 O2' A A1949 10.664 18.355 88.782 1.00 43.64 O
ATOM 13 C1' A A1949 10.338 15.951 88.637 1.00 43.23 C
ATOM 14 N9 A A1949 11.415 15.288 89.401 1.00 43.07 N
ATOM 15 C8 A A1949 12.094 14.205 88.935 1.00 42.74 C
ATOM 16 N7 A A1949 13.039 13.766 89.728 1.00 42.65 N
ATOM 17 C5 A A1949 13.026 14.621 90.819 1.00 42.95 C
ATOM 18 C6 A A1949 13.820 14.654 92.010 1.00 43.04 C
ATOM 19 N6 A A1949 14.768 13.750 92.231 1.00 42.81 N
ATOM 20 N1 A A1949 13.606 15.581 92.979 1.00 43.37 N
ATOM 21 C2 A A1949 12.617 16.415 92.667 1.00 43.59 C
ATOM 22 N3 A A1949 11.799 16.483 91.568 1.00 43.54 N
ATOM 23 C4 A A1949 12.020 15.546 90.640 1.00 43.21 C
ATOM 24 P A A1950 7.634 18.368 85.904 1.00 37.55 P
ATOM 25 OP1 A A1950 8.438 19.001 84.812 1.00 37.42 O
ATOM 26 OP2 A A1950 6.626 19.174 86.614 1.00 37.94 O
ATOM 27 O5' A A1950 6.975 17.047 85.376 1.00 37.34 O
TER
ATOM 1 O3' C B1943 16.187 11.643 95.282 1.00 42.54 O
ATOM 2 P U B1944 17.275 12.499 94.491 1.00 39.05 P
ATOM 3 OP1 U B1944 18.466 12.518 95.298 1.00 39.08 O
ATOM 4 OP2 U B1944 16.676 13.741 94.113 1.00 39.24 O
ATOM 5 O5' U B1944 17.538 11.646 93.215 1.00 38.68 O
ATOM 6 C5' U B1944 18.194 10.390 93.307 1.00 38.45 C
ATOM 7 C4' U B1944 18.381 9.811 91.958 1.00 38.14 C
ATOM 8 O4' U B1944 17.114 9.330 91.449 1.00 38.13 O
ATOM 9 C3' U B1944 18.841 10.804 90.921 1.00 38.07 C
ATOM 10 O3' U B1944 20.213 10.949 90.952 1.00 37.97 O
ATOM 11 C2' U B1944 18.310 10.244 89.597 1.00 37.86 C
ATOM 12 O2' U B1944 19.303 9.505 88.929 1.00 37.57 O
ATOM 13 C1' U B1944 17.189 9.290 90.045 1.00 37.91 C
ATOM 14 N1 U B1944 15.906 9.644 89.444 1.00 38.01 N
ATOM 15 C2 U B1944 15.323 10.853 89.690 1.00 38.27 C
ATOM 16 O2 U B1944 15.773 11.614 90.534 1.00 38.45 O
ATOM 17 N3 U B1944 14.169 11.075 88.957 1.00 38.34 N
ATOM 18 C4 U B1944 13.592 10.226 88.033 1.00 38.17 C
ATOM 19 O4 U B1944 12.521 10.484 87.437 1.00 38.26 O
ATOM 20 C5 U B1944 14.297 9.002 87.878 1.00 37.90 C
ATOM 21 C6 U B1944 15.396 8.750 88.560 1.00 37.83 C
ATOM 22 P A B1945 20.931 12.174 90.237 1.00 33.60 P
ATOM 23 OP1 A B1945 20.404 12.236 88.920 1.00 33.47 O
ATOM 24 OP2 A B1945 22.423 11.969 90.392 1.00 33.47 O
ATOM 25 O5' A B1945 20.472 13.436 91.089 1.00 33.96 O
TER
ATOM 2 P A A1949 13.264 16.155 84.963 1.00 42.43 P
ATOM 3 OP1 A A1949 13.020 17.416 84.283 1.00 42.61 O
ATOM 4 OP2 A A1949 14.512 16.010 85.710 1.00 42.33 O
ATOM 5 O5' A A1949 12.067 15.769 85.916 1.00 42.63 O
ATOM 6 C5' A A1949 10.816 15.334 85.435 1.00 42.67 C
ATOM 7 C4' A A1949 9.761 15.801 86.361 1.00 43.00 C
ATOM 8 O4' A A1949 9.911 15.077 87.602 1.00 43.01 O
ATOM 9 C3' A A1949 9.905 17.267 86.711 1.00 43.28 C
ATOM 10 O3' A A1949 8.639 17.827 87.044 1.00 43.61 O
ATOM 11 C2' A A1949 10.789 17.233 87.946 1.00 43.30 C
ATOM 12 O2' A A1949 10.664 18.355 88.782 1.00 43.64 O
ATOM 13 C1' A A1949 10.338 15.951 88.637 1.00 43.23 C
ATOM 14 N9 A A1949 11.415 15.288 89.401 1.00 43.07 N
ATOM 15 C8 A A1949 12.094 14.205 88.935 1.00 42.74 C
ATOM 16 N7 A A1949 13.039 13.766 89.728 1.00 42.65 N
ATOM 17 C5 A A1949 13.026 14.621 90.819 1.00 42.95 C
ATOM 18 C6 A A1949 13.820 14.654 92.010 1.00 43.04 C
ATOM 19 N6 A A1949 14.768 13.750 92.231 1.00 42.81 N
ATOM 20 N1 A A1949 13.606 15.581 92.979 1.00 43.37 N
ATOM 21 C2 A A1949 12.617 16.415 92.667 1.00 43.59 C
ATOM 22 N3 A A1949 11.799 16.483 91.568 1.00 43.54 N
ATOM 23 C4 A A1949 12.020 15.546 90.640 1.00 43.21 C
ATOM 24 P A A1950 7.634 18.368 85.904 1.00 37.55 P
ATOM 25 OP1 A A1950 8.438 19.001 84.812 1.00 37.42 O
ATOM 26 OP2 A A1950 6.626 19.174 86.614 1.00 37.94 O
ATOM 27 O5' A A1950 6.975 17.047 85.376 1.00 37.34 O
TER
ATOM 1 O3' C B1943 16.187 11.643 95.282 1.00 42.54 O
ATOM 2 P U B1944 17.275 12.499 94.491 1.00 39.05 P
ATOM 3 OP1 U B1944 18.466 12.518 95.298 1.00 39.08 O
ATOM 4 OP2 U B1944 16.676 13.741 94.113 1.00 39.24 O
ATOM 5 O5' U B1944 17.538 11.646 93.215 1.00 38.68 O
ATOM 6 C5' U B1944 18.194 10.390 93.307 1.00 38.45 C
ATOM 7 C4' U B1944 18.381 9.811 91.958 1.00 38.14 C
ATOM 8 O4' U B1944 17.114 9.330 91.449 1.00 38.13 O
ATOM 9 C3' U B1944 18.841 10.804 90.921 1.00 38.07 C
ATOM 10 O3' U B1944 20.213 10.949 90.952 1.00 37.97 O
ATOM 11 C2' U B1944 18.310 10.244 89.597 1.00 37.86 C
ATOM 12 O2' U B1944 19.303 9.505 88.929 1.00 37.57 O
ATOM 13 C1' U B1944 17.189 9.290 90.045 1.00 37.91 C
ATOM 14 N1 U B1944 15.906 9.644 89.444 1.00 38.01 N
ATOM 15 C2 U B1944 15.323 10.853 89.690 1.00 38.27 C
ATOM 16 O2 U B1944 15.773 11.614 90.534 1.00 38.45 O
ATOM 17 N3 U B1944 14.169 11.075 88.957 1.00 38.34 N
ATOM 18 C4 U B1944 13.592 10.226 88.033 1.00 38.17 C
ATOM 19 O4 U B1944 12.521 10.484 87.437 1.00 38.26 O
ATOM 20 C5 U B1944 14.297 9.002 87.878 1.00 37.90 C
ATOM 21 C6 U B1944 15.396 8.750 88.560 1.00 37.83 C
ATOM 22 P A B1945 20.931 12.174 90.237 1.00 33.60 P
ATOM 23 OP1 A B1945 20.404 12.236 88.920 1.00 33.47 O
ATOM 24 OP2 A B1945 22.423 11.969 90.392 1.00 33.47 O
ATOM 25 O5' A B1945 20.472 13.436 91.089 1.00 33.96 O
TER
Atoms:
OP1: (13.020,17.416,84.283)
OP2: (14.512,16.010,85.710)
C3': (9.905,17.267,86.711)
C1': (10.338,15.951,88.637)
C5': (10.816,15.334,85.435)
O4': (9.911,15.077,87.602)
C8: (12.094,14.205,88.935)
O2': (10.664,18.355,88.782)
C6: (13.820,14.654,92.010)
C5: (13.026,14.621,90.819)
C4: (12.020,15.546,90.640)
P: (13.264,16.155,84.963)
C4': (9.761,15.801,86.361)
C2': (10.789,17.233,87.946)
C2: (12.617,16.415,92.667)
N1: (13.606,15.581,92.979)
N3: (11.799,16.483,91.568)
N6: (14.768,13.750,92.231)
N7: (13.039,13.766,89.728)
N9: (11.415,15.288,89.401)
O5': (12.067,15.769,85.916)
O3': (8.639,17.827,87.044)
OP2: (14.512,16.010,85.710)
C3': (9.905,17.267,86.711)
C1': (10.338,15.951,88.637)
C5': (10.816,15.334,85.435)
O4': (9.911,15.077,87.602)
C8: (12.094,14.205,88.935)
O2': (10.664,18.355,88.782)
C6: (13.820,14.654,92.010)
C5: (13.026,14.621,90.819)
C4: (12.020,15.546,90.640)
P: (13.264,16.155,84.963)
C4': (9.761,15.801,86.361)
C2': (10.789,17.233,87.946)
C2: (12.617,16.415,92.667)
N1: (13.606,15.581,92.979)
N3: (11.799,16.483,91.568)
N6: (14.768,13.750,92.231)
N7: (13.039,13.766,89.728)
N9: (11.415,15.288,89.401)
O5': (12.067,15.769,85.916)
O3': (8.639,17.827,87.044)
C4: (13.592,10.226,88.033)
N3: (14.169,11.075,88.957)
OP1: (18.466,12.518,95.298)
OP2: (16.676,13.741,94.113)
C2: (15.323,10.853,89.690)
C1': (17.189,9.290,90.045)
C3': (18.841,10.804,90.921)
O5': (17.538,11.646,93.215)
O4': (17.114,9.330,91.449)
C5': (18.194,10.390,93.307)
P: (17.275,12.499,94.491)
C4': (18.381,9.811,91.958)
C2': (18.310,10.244,89.597)
O2': (19.303,9.505,88.929)
N1: (15.906,9.644,89.444)
O4: (12.521,10.484,87.437)
O2: (15.773,11.614,90.534)
C6: (15.396,8.750,88.560)
C5: (14.297,9.002,87.878)
O3': (20.213,10.949,90.952)
N3: (14.169,11.075,88.957)
OP1: (18.466,12.518,95.298)
OP2: (16.676,13.741,94.113)
C2: (15.323,10.853,89.690)
C1': (17.189,9.290,90.045)
C3': (18.841,10.804,90.921)
O5': (17.538,11.646,93.215)
O4': (17.114,9.330,91.449)
C5': (18.194,10.390,93.307)
P: (17.275,12.499,94.491)
C4': (18.381,9.811,91.958)
C2': (18.310,10.244,89.597)
O2': (19.303,9.505,88.929)
N1: (15.906,9.644,89.444)
O4: (12.521,10.484,87.437)
O2: (15.773,11.614,90.534)
C6: (15.396,8.750,88.560)
C5: (14.297,9.002,87.878)
O3': (20.213,10.949,90.952)
Image (generated by PyMOL):