ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61021:61018

Extra

PDB:
ATOM 1 O3' A A1020 236.665 5.888 218.684 1.00 49.10 O
ATOM 2 P A A1021 236.189 5.577 217.210 1.00 49.24 P
ATOM 3 OP1 A A1021 235.505 4.287 217.264 1.00 49.38 O
ATOM 4 OP2 A A1021 237.351 5.729 216.274 1.00 49.63 O
ATOM 5 O5' A A1021 235.124 6.720 216.958 1.00 48.78 O
ATOM 6 C5' A A1021 235.494 8.080 216.906 1.00 48.59 C
ATOM 7 C4' A A1021 235.607 8.559 215.489 1.00 48.76 C
ATOM 8 O4' A A1021 234.288 8.792 214.930 1.00 48.52 O
ATOM 9 C3' A A1021 236.343 9.870 215.302 1.00 48.72 C
ATOM 10 O3' A A1021 237.754 9.676 215.306 1.00 49.10 O
ATOM 11 C2' A A1021 235.776 10.357 213.970 1.00 48.75 C
ATOM 12 O2' A A1021 236.341 9.605 212.902 1.00 49.24 O
ATOM 13 C1' A A1021 234.308 9.933 214.104 1.00 48.47 C
ATOM 14 N9 A A1021 233.430 10.970 214.725 1.00 48.00 N
ATOM 15 C8 A A1021 233.229 11.219 216.070 1.00 47.69 C
ATOM 16 N7 A A1021 232.355 12.133 216.416 1.00 47.32 N
ATOM 17 C5 A A1021 231.872 12.506 215.185 1.00 47.39 C
ATOM 18 C6 A A1021 230.891 13.459 214.823 1.00 47.15 C
ATOM 19 N6 A A1021 230.212 14.218 215.709 1.00 46.79 N
ATOM 20 N1 A A1021 230.638 13.624 213.497 1.00 47.35 N
ATOM 21 C2 A A1021 231.299 12.873 212.618 1.00 47.74 C
ATOM 22 N3 A A1021 232.242 11.952 212.851 1.00 47.99 N
ATOM 23 C4 A A1021 232.502 11.807 214.157 1.00 47.80 C
ATOM 24 P C A1022 238.780 10.891 215.486 1.00 49.80 P
ATOM 25 OP1 C A1022 238.193 11.840 216.472 1.00 49.31 O
ATOM 26 OP2 C A1022 239.096 11.373 214.132 1.00 50.07 O
ATOM 27 O5' C A1022 240.037 10.179 216.138 1.00 50.15 O
TER

ATOM 1 O3' A B1017 226.073 15.537 214.756 1.00 45.12 O
ATOM 2 P U B1018 227.093 16.285 215.719 1.00 43.40 P
ATOM 3 OP1 U B1018 226.404 17.451 216.310 1.00 43.12 O
ATOM 4 OP2 U B1018 228.354 16.501 214.939 1.00 43.66 O
ATOM 5 O5' U B1018 227.342 15.199 216.830 1.00 43.37 O
ATOM 6 C5' U B1018 226.281 14.628 217.543 1.00 43.22 C
ATOM 7 C4' U B1018 226.117 13.182 217.195 1.00 43.44 C
ATOM 8 O4' U B1018 226.024 13.010 215.773 1.00 43.67 O
ATOM 9 C3' U B1018 227.246 12.268 217.571 1.00 43.64 C
ATOM 10 O3' U B1018 227.244 11.953 218.954 1.00 43.51 O
ATOM 11 C2' U B1018 227.025 11.054 216.638 1.00 43.93 C
ATOM 12 O2' U B1018 226.227 10.063 217.244 1.00 43.92 O
ATOM 13 C1' U B1018 226.218 11.656 215.491 1.00 43.92 C
ATOM 14 N1 U B1018 226.856 11.497 214.177 1.00 44.24 N
ATOM 15 C2 U B1018 227.153 10.196 213.793 1.00 44.55 C
ATOM 16 O2 U B1018 226.979 9.213 214.478 1.00 44.57 O
ATOM 17 N3 U B1018 227.698 10.065 212.556 1.00 44.88 N
ATOM 18 C4 U B1018 227.965 11.069 211.656 1.00 44.95 C
ATOM 19 O4 U B1018 228.504 10.754 210.581 1.00 45.32 O
ATOM 20 C5 U B1018 227.610 12.392 212.107 1.00 44.61 C
ATOM 21 C6 U B1018 227.074 12.560 213.323 1.00 44.28 C
ATOM 22 P A B1019 228.612 11.603 219.699 1.00 45.34 P
ATOM 23 OP1 A B1019 228.303 11.300 221.118 1.00 45.21 O
ATOM 24 OP2 A B1019 229.513 12.685 219.407 1.00 45.32 O
ATOM 25 O5' A B1019 229.098 10.268 218.951 1.00 45.70 O
TER

Atoms:
OP1: (235.505,4.287,217.264)
OP2: (237.351,5.729,216.274)
C3': (236.343,9.870,215.302)
C1': (234.308,9.933,214.104)
C5': (235.494,8.080,216.906)
O4': (234.288,8.792,214.930)
C8: (233.229,11.219,216.070)
O2': (236.341,9.605,212.902)
C6: (230.891,13.459,214.823)
C5: (231.872,12.506,215.185)
C4: (232.502,11.807,214.157)
P: (236.189,5.577,217.210)
C4': (235.607,8.559,215.489)
C2': (235.776,10.357,213.970)
C2: (231.299,12.873,212.618)
N1: (230.638,13.624,213.497)
N3: (232.242,11.952,212.851)
N6: (230.212,14.218,215.709)
N7: (232.355,12.133,216.416)
N9: (233.430,10.970,214.725)
O5': (235.124,6.720,216.958)
O3': (237.754,9.676,215.306)
C4: (227.965,11.069,211.656)
N3: (227.698,10.065,212.556)
OP1: (226.404,17.451,216.310)
OP2: (228.354,16.501,214.939)
C2: (227.153,10.196,213.793)
C1': (226.218,11.656,215.491)
C3': (227.246,12.268,217.571)
O5': (227.342,15.199,216.830)
O4': (226.024,13.010,215.773)
C5': (226.281,14.628,217.543)
P: (227.093,16.285,215.719)
C4': (226.117,13.182,217.195)
C2': (227.025,11.054,216.638)
O2': (226.227,10.063,217.244)
N1: (226.856,11.497,214.177)
O4: (228.504,10.754,210.581)
O2: (226.979,9.213,214.478)
C6: (227.074,12.560,213.323)
C5: (227.610,12.392,212.107)
O3': (227.244,11.953,218.954)
Image (generated by PyMOL):
PyMOL image
show in jmol