Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02407:02538
Extra
PDB:
ATOM 1 O3' C A2406 74.460 114.953 161.193 1.00 68.20 O
ATOM 2 P A A2407 75.500 114.421 162.303 1.00 66.01 P
ATOM 3 OP1 A A2407 76.851 114.724 161.772 1.00 65.72 O
ATOM 4 OP2 A A2407 75.160 113.026 162.690 1.00 65.31 O
ATOM 5 O5' A A2407 75.250 115.364 163.561 1.00 64.90 O
ATOM 6 C5' A A2407 74.061 115.243 164.363 1.00 63.60 C
ATOM 7 C4' A A2407 73.980 116.395 165.331 1.00 63.36 C
ATOM 8 O4' A A2407 75.183 116.396 166.144 1.00 61.83 O
ATOM 9 C3' A A2407 73.970 117.773 164.689 1.00 64.03 C
ATOM 10 O3' A A2407 72.664 118.163 164.254 1.00 66.19 O
ATOM 11 C2' A A2407 74.528 118.654 165.801 1.00 62.31 C
ATOM 12 O2' A A2407 73.572 118.978 166.789 1.00 59.90 O
ATOM 13 C1' A A2407 75.592 117.731 166.402 1.00 61.02 C
ATOM 14 N9 A A2407 76.933 117.923 165.837 1.00 59.50 N
ATOM 15 C8 A A2407 77.690 117.025 165.123 1.00 58.94 C
ATOM 16 N7 A A2407 78.859 117.492 164.753 1.00 57.98 N
ATOM 17 C5 A A2407 78.875 118.785 165.256 1.00 56.64 C
ATOM 18 C6 A A2407 79.836 119.813 165.199 1.00 54.94 C
ATOM 19 N6 A A2407 81.023 119.695 164.605 1.00 53.58 N
ATOM 20 N1 A A2407 79.531 120.985 165.786 1.00 55.04 N
ATOM 21 C2 A A2407 78.348 121.108 166.394 1.00 56.59 C
ATOM 22 N3 A A2407 77.368 120.219 166.523 1.00 57.33 N
ATOM 23 C4 A A2407 77.696 119.065 165.924 1.00 58.17 C
ATOM 24 P G A2408 72.482 118.899 162.831 1.00 66.40 P
ATOM 25 OP1 G A2408 71.025 119.149 162.618 1.00 64.60 O
ATOM 26 OP2 G A2408 73.248 118.115 161.828 1.00 66.35 O
ATOM 27 O5' G A2408 73.220 120.301 163.016 1.00 65.66 O
TER
ATOM 1 O3' G B2537 87.653 126.257 170.075 1.00 86.76 O
ATOM 2 P A B2538 87.107 127.461 169.152 1.00 90.08 P
ATOM 3 OP1 A B2538 87.905 128.665 169.501 1.00 89.76 O
ATOM 4 OP2 A B2538 85.625 127.519 169.238 1.00 89.64 O
ATOM 5 O5' A B2538 87.519 127.035 167.674 1.00 89.50 O
ATOM 6 C5' A B2538 88.905 126.957 167.279 1.00 88.24 C
ATOM 7 C4' A B2538 89.026 126.221 165.967 1.00 87.92 C
ATOM 8 O4' A B2538 88.571 124.851 166.149 1.00 87.17 O
ATOM 9 C3' A B2538 88.138 126.758 164.855 1.00 88.06 C
ATOM 10 O3' A B2538 88.702 127.870 164.177 1.00 88.57 O
ATOM 11 C2' A B2538 87.974 125.540 163.963 1.00 87.02 C
ATOM 12 O2' A B2538 89.118 125.310 163.167 1.00 87.05 O
ATOM 13 C1' A B2538 87.827 124.436 165.013 1.00 85.49 C
ATOM 14 N9 A B2538 86.433 124.258 165.428 1.00 82.89 N
ATOM 15 C8 A B2538 85.696 125.065 166.264 1.00 81.79 C
ATOM 16 N7 A B2538 84.461 124.665 166.434 1.00 81.04 N
ATOM 17 C5 A B2538 84.376 123.515 165.664 1.00 81.70 C
ATOM 18 C6 A B2538 83.323 122.622 165.420 1.00 81.42 C
ATOM 19 N6 A B2538 82.106 122.756 165.949 1.00 80.96 N
ATOM 20 N1 A B2538 83.565 121.573 164.603 1.00 81.73 N
ATOM 21 C2 A B2538 84.790 121.442 164.073 1.00 81.90 C
ATOM 22 N3 A B2538 85.861 122.216 164.227 1.00 81.85 N
ATOM 23 C4 A B2538 85.585 123.248 165.044 1.00 82.29 C
ATOM 24 P G B2539 87.827 129.206 163.986 1.00 90.01 P
ATOM 25 OP1 G B2539 88.574 130.083 163.045 1.00 90.03 O
ATOM 26 OP2 G B2539 87.457 129.718 165.334 1.00 89.05 O
ATOM 27 O5' G B2539 86.483 128.712 163.276 1.00 89.48 O
TER
ATOM 2 P A A2407 75.500 114.421 162.303 1.00 66.01 P
ATOM 3 OP1 A A2407 76.851 114.724 161.772 1.00 65.72 O
ATOM 4 OP2 A A2407 75.160 113.026 162.690 1.00 65.31 O
ATOM 5 O5' A A2407 75.250 115.364 163.561 1.00 64.90 O
ATOM 6 C5' A A2407 74.061 115.243 164.363 1.00 63.60 C
ATOM 7 C4' A A2407 73.980 116.395 165.331 1.00 63.36 C
ATOM 8 O4' A A2407 75.183 116.396 166.144 1.00 61.83 O
ATOM 9 C3' A A2407 73.970 117.773 164.689 1.00 64.03 C
ATOM 10 O3' A A2407 72.664 118.163 164.254 1.00 66.19 O
ATOM 11 C2' A A2407 74.528 118.654 165.801 1.00 62.31 C
ATOM 12 O2' A A2407 73.572 118.978 166.789 1.00 59.90 O
ATOM 13 C1' A A2407 75.592 117.731 166.402 1.00 61.02 C
ATOM 14 N9 A A2407 76.933 117.923 165.837 1.00 59.50 N
ATOM 15 C8 A A2407 77.690 117.025 165.123 1.00 58.94 C
ATOM 16 N7 A A2407 78.859 117.492 164.753 1.00 57.98 N
ATOM 17 C5 A A2407 78.875 118.785 165.256 1.00 56.64 C
ATOM 18 C6 A A2407 79.836 119.813 165.199 1.00 54.94 C
ATOM 19 N6 A A2407 81.023 119.695 164.605 1.00 53.58 N
ATOM 20 N1 A A2407 79.531 120.985 165.786 1.00 55.04 N
ATOM 21 C2 A A2407 78.348 121.108 166.394 1.00 56.59 C
ATOM 22 N3 A A2407 77.368 120.219 166.523 1.00 57.33 N
ATOM 23 C4 A A2407 77.696 119.065 165.924 1.00 58.17 C
ATOM 24 P G A2408 72.482 118.899 162.831 1.00 66.40 P
ATOM 25 OP1 G A2408 71.025 119.149 162.618 1.00 64.60 O
ATOM 26 OP2 G A2408 73.248 118.115 161.828 1.00 66.35 O
ATOM 27 O5' G A2408 73.220 120.301 163.016 1.00 65.66 O
TER
ATOM 1 O3' G B2537 87.653 126.257 170.075 1.00 86.76 O
ATOM 2 P A B2538 87.107 127.461 169.152 1.00 90.08 P
ATOM 3 OP1 A B2538 87.905 128.665 169.501 1.00 89.76 O
ATOM 4 OP2 A B2538 85.625 127.519 169.238 1.00 89.64 O
ATOM 5 O5' A B2538 87.519 127.035 167.674 1.00 89.50 O
ATOM 6 C5' A B2538 88.905 126.957 167.279 1.00 88.24 C
ATOM 7 C4' A B2538 89.026 126.221 165.967 1.00 87.92 C
ATOM 8 O4' A B2538 88.571 124.851 166.149 1.00 87.17 O
ATOM 9 C3' A B2538 88.138 126.758 164.855 1.00 88.06 C
ATOM 10 O3' A B2538 88.702 127.870 164.177 1.00 88.57 O
ATOM 11 C2' A B2538 87.974 125.540 163.963 1.00 87.02 C
ATOM 12 O2' A B2538 89.118 125.310 163.167 1.00 87.05 O
ATOM 13 C1' A B2538 87.827 124.436 165.013 1.00 85.49 C
ATOM 14 N9 A B2538 86.433 124.258 165.428 1.00 82.89 N
ATOM 15 C8 A B2538 85.696 125.065 166.264 1.00 81.79 C
ATOM 16 N7 A B2538 84.461 124.665 166.434 1.00 81.04 N
ATOM 17 C5 A B2538 84.376 123.515 165.664 1.00 81.70 C
ATOM 18 C6 A B2538 83.323 122.622 165.420 1.00 81.42 C
ATOM 19 N6 A B2538 82.106 122.756 165.949 1.00 80.96 N
ATOM 20 N1 A B2538 83.565 121.573 164.603 1.00 81.73 N
ATOM 21 C2 A B2538 84.790 121.442 164.073 1.00 81.90 C
ATOM 22 N3 A B2538 85.861 122.216 164.227 1.00 81.85 N
ATOM 23 C4 A B2538 85.585 123.248 165.044 1.00 82.29 C
ATOM 24 P G B2539 87.827 129.206 163.986 1.00 90.01 P
ATOM 25 OP1 G B2539 88.574 130.083 163.045 1.00 90.03 O
ATOM 26 OP2 G B2539 87.457 129.718 165.334 1.00 89.05 O
ATOM 27 O5' G B2539 86.483 128.712 163.276 1.00 89.48 O
TER
Atoms:
OP1: (76.851,114.724,161.772)
OP2: (75.160,113.026,162.690)
C3': (73.970,117.773,164.689)
C1': (75.592,117.731,166.402)
C5': (74.061,115.243,164.363)
O4': (75.183,116.396,166.144)
C8: (77.690,117.025,165.123)
O2': (73.572,118.978,166.789)
C6: (79.836,119.813,165.199)
C5: (78.875,118.785,165.256)
C4: (77.696,119.065,165.924)
P: (75.500,114.421,162.303)
C4': (73.980,116.395,165.331)
C2': (74.528,118.654,165.801)
C2: (78.348,121.108,166.394)
N1: (79.531,120.985,165.786)
N3: (77.368,120.219,166.523)
N6: (81.023,119.695,164.605)
N7: (78.859,117.492,164.753)
N9: (76.933,117.923,165.837)
O5': (75.250,115.364,163.561)
O3': (72.664,118.163,164.254)
OP2: (75.160,113.026,162.690)
C3': (73.970,117.773,164.689)
C1': (75.592,117.731,166.402)
C5': (74.061,115.243,164.363)
O4': (75.183,116.396,166.144)
C8: (77.690,117.025,165.123)
O2': (73.572,118.978,166.789)
C6: (79.836,119.813,165.199)
C5: (78.875,118.785,165.256)
C4: (77.696,119.065,165.924)
P: (75.500,114.421,162.303)
C4': (73.980,116.395,165.331)
C2': (74.528,118.654,165.801)
C2: (78.348,121.108,166.394)
N1: (79.531,120.985,165.786)
N3: (77.368,120.219,166.523)
N6: (81.023,119.695,164.605)
N7: (78.859,117.492,164.753)
N9: (76.933,117.923,165.837)
O5': (75.250,115.364,163.561)
O3': (72.664,118.163,164.254)
OP1: (87.905,128.665,169.501)
OP2: (85.625,127.519,169.238)
C3': (88.138,126.758,164.855)
C1': (87.827,124.436,165.013)
C5': (88.905,126.957,167.279)
O4': (88.571,124.851,166.149)
C8: (85.696,125.065,166.264)
O2': (89.118,125.310,163.167)
C6: (83.323,122.622,165.420)
C5: (84.376,123.515,165.664)
C4: (85.585,123.248,165.044)
P: (87.107,127.461,169.152)
C4': (89.026,126.221,165.967)
C2': (87.974,125.540,163.963)
C2: (84.790,121.442,164.073)
N1: (83.565,121.573,164.603)
N3: (85.861,122.216,164.227)
N6: (82.106,122.756,165.949)
N7: (84.461,124.665,166.434)
N9: (86.433,124.258,165.428)
O5': (87.519,127.035,167.674)
O3': (88.702,127.870,164.177)
OP2: (85.625,127.519,169.238)
C3': (88.138,126.758,164.855)
C1': (87.827,124.436,165.013)
C5': (88.905,126.957,167.279)
O4': (88.571,124.851,166.149)
C8: (85.696,125.065,166.264)
O2': (89.118,125.310,163.167)
C6: (83.323,122.622,165.420)
C5: (84.376,123.515,165.664)
C4: (85.585,123.248,165.044)
P: (87.107,127.461,169.152)
C4': (89.026,126.221,165.967)
C2': (87.974,125.540,163.963)
C2: (84.790,121.442,164.073)
N1: (83.565,121.573,164.603)
N3: (85.861,122.216,164.227)
N6: (82.106,122.756,165.949)
N7: (84.461,124.665,166.434)
N9: (86.433,124.258,165.428)
O5': (87.519,127.035,167.674)
O3': (88.702,127.870,164.177)
Image (generated by PyMOL):