Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A478:A502
Extra
PDB:
ATOM 1 O3' A A 477 -28.528-101.079 42.730 1.00 0.01 O
ATOM 2 P A A 478 -28.208 -99.726 41.958 1.00 0.01 P
ATOM 3 OP1 A A 478 -27.421 -98.877 42.878 1.00 0.01 O
ATOM 4 OP2 A A 478 -29.492 -99.202 41.449 1.00 0.01 O
ATOM 5 O5' A A 478 -27.303-100.241 40.747 1.00 0.01 O
ATOM 6 C5' A A 478 -26.326 -99.399 40.177 1.00 0.01 C
ATOM 7 C4' A A 478 -25.597-100.034 39.025 1.00 0.01 C
ATOM 8 O4' A A 478 -26.553-100.675 38.144 1.00 0.01 O
ATOM 9 C3' A A 478 -24.859 -99.031 38.145 1.00 0.01 C
ATOM 10 O3' A A 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 11 C2' A A 478 -25.889 -98.753 37.088 1.00 0.01 C
ATOM 12 O2' A A 478 -25.370 -98.168 35.920 1.00 0.01 O
ATOM 13 C1' A A 478 -26.353-100.167 36.849 1.00 0.01 C
ATOM 14 N9 A A 478 -27.572-100.298 36.058 1.00 0.01 N
ATOM 15 C8 A A 478 -28.738 -99.615 36.138 1.00 0.01 C
ATOM 16 N7 A A 478 -29.621 -99.974 35.243 1.00 0.01 N
ATOM 17 C5 A A 478 -28.991-100.947 34.521 1.00 0.01 C
ATOM 18 C6 A A 478 -29.413-101.713 33.449 1.00 0.01 C
ATOM 19 N6 A A 478 -30.613-101.575 32.908 1.00 0.01 N
ATOM 20 N1 A A 478 -28.569-102.626 32.951 1.00 0.01 N
ATOM 21 C2 A A 478 -27.370-102.730 33.512 1.00 0.01 C
ATOM 22 N3 A A 478 -26.872-102.050 34.527 1.00 0.01 N
ATOM 23 C4 A A 478 -27.737-101.156 35.000 1.00 0.01 C
ATOM 24 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 25 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 26 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 27 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
TER
ATOM 1 O3' A B 501 -36.075-111.270 27.684 1.00 0.05 O
ATOM 2 P A B 502 -34.947-110.828 26.637 1.00 0.01 P
ATOM 3 OP1 A B 502 -35.425-111.224 25.300 1.00 0.01 O
ATOM 4 OP2 A B 502 -33.671-111.366 27.116 1.00 0.01 O
ATOM 5 O5' A B 502 -34.942-109.247 26.754 1.00 0.01 O
ATOM 6 C5' A B 502 -35.827-108.466 25.979 1.00 0.01 C
ATOM 7 C4' A B 502 -35.361-107.042 25.840 1.00 0.01 C
ATOM 8 O4' A B 502 -34.626-106.649 27.015 1.00 0.01 O
ATOM 9 C3' A B 502 -34.461-106.751 24.640 1.00 0.01 C
ATOM 10 O3' A B 502 -35.123-105.864 23.742 1.00 0.01 O
ATOM 11 C2' A B 502 -33.213-106.067 25.222 1.00 0.01 C
ATOM 12 O2' A B 502 -32.814-104.900 24.516 1.00 0.01 O
ATOM 13 C1' A B 502 -33.623-105.728 26.652 1.00 0.01 C
ATOM 14 N9 A B 502 -32.527-105.815 27.626 1.00 0.01 N
ATOM 15 C8 A B 502 -31.643-106.832 27.839 1.00 0.01 C
ATOM 16 N7 A B 502 -30.768-106.617 28.790 1.00 0.01 N
ATOM 17 C5 A B 502 -31.098-105.362 29.241 1.00 0.01 C
ATOM 18 C6 A B 502 -30.559-104.556 30.247 1.00 0.01 C
ATOM 19 N6 A B 502 -29.525-104.882 31.030 1.00 0.01 N
ATOM 20 N1 A B 502 -31.139-103.365 30.423 1.00 0.01 N
ATOM 21 C2 A B 502 -32.166-103.021 29.661 1.00 0.01 C
ATOM 22 N3 A B 502 -32.756-103.690 28.703 1.00 0.01 N
ATOM 23 C4 A B 502 -32.168-104.864 28.533 1.00 0.01 C
ATOM 24 P A B 503 -36.143-106.462 22.677 1.00 27.93 P
ATOM 25 OP1 A B 503 -35.476-107.593 22.022 1.00 27.93 O
ATOM 26 OP2 A B 503 -36.609-105.347 21.866 1.00 27.93 O
ATOM 27 O5' A B 503 -37.324-106.995 23.592 1.00 27.93 O
TER
ATOM 2 P A A 478 -28.208 -99.726 41.958 1.00 0.01 P
ATOM 3 OP1 A A 478 -27.421 -98.877 42.878 1.00 0.01 O
ATOM 4 OP2 A A 478 -29.492 -99.202 41.449 1.00 0.01 O
ATOM 5 O5' A A 478 -27.303-100.241 40.747 1.00 0.01 O
ATOM 6 C5' A A 478 -26.326 -99.399 40.177 1.00 0.01 C
ATOM 7 C4' A A 478 -25.597-100.034 39.025 1.00 0.01 C
ATOM 8 O4' A A 478 -26.553-100.675 38.144 1.00 0.01 O
ATOM 9 C3' A A 478 -24.859 -99.031 38.145 1.00 0.01 C
ATOM 10 O3' A A 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 11 C2' A A 478 -25.889 -98.753 37.088 1.00 0.01 C
ATOM 12 O2' A A 478 -25.370 -98.168 35.920 1.00 0.01 O
ATOM 13 C1' A A 478 -26.353-100.167 36.849 1.00 0.01 C
ATOM 14 N9 A A 478 -27.572-100.298 36.058 1.00 0.01 N
ATOM 15 C8 A A 478 -28.738 -99.615 36.138 1.00 0.01 C
ATOM 16 N7 A A 478 -29.621 -99.974 35.243 1.00 0.01 N
ATOM 17 C5 A A 478 -28.991-100.947 34.521 1.00 0.01 C
ATOM 18 C6 A A 478 -29.413-101.713 33.449 1.00 0.01 C
ATOM 19 N6 A A 478 -30.613-101.575 32.908 1.00 0.01 N
ATOM 20 N1 A A 478 -28.569-102.626 32.951 1.00 0.01 N
ATOM 21 C2 A A 478 -27.370-102.730 33.512 1.00 0.01 C
ATOM 22 N3 A A 478 -26.872-102.050 34.527 1.00 0.01 N
ATOM 23 C4 A A 478 -27.737-101.156 35.000 1.00 0.01 C
ATOM 24 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 25 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 26 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 27 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
TER
ATOM 1 O3' A B 501 -36.075-111.270 27.684 1.00 0.05 O
ATOM 2 P A B 502 -34.947-110.828 26.637 1.00 0.01 P
ATOM 3 OP1 A B 502 -35.425-111.224 25.300 1.00 0.01 O
ATOM 4 OP2 A B 502 -33.671-111.366 27.116 1.00 0.01 O
ATOM 5 O5' A B 502 -34.942-109.247 26.754 1.00 0.01 O
ATOM 6 C5' A B 502 -35.827-108.466 25.979 1.00 0.01 C
ATOM 7 C4' A B 502 -35.361-107.042 25.840 1.00 0.01 C
ATOM 8 O4' A B 502 -34.626-106.649 27.015 1.00 0.01 O
ATOM 9 C3' A B 502 -34.461-106.751 24.640 1.00 0.01 C
ATOM 10 O3' A B 502 -35.123-105.864 23.742 1.00 0.01 O
ATOM 11 C2' A B 502 -33.213-106.067 25.222 1.00 0.01 C
ATOM 12 O2' A B 502 -32.814-104.900 24.516 1.00 0.01 O
ATOM 13 C1' A B 502 -33.623-105.728 26.652 1.00 0.01 C
ATOM 14 N9 A B 502 -32.527-105.815 27.626 1.00 0.01 N
ATOM 15 C8 A B 502 -31.643-106.832 27.839 1.00 0.01 C
ATOM 16 N7 A B 502 -30.768-106.617 28.790 1.00 0.01 N
ATOM 17 C5 A B 502 -31.098-105.362 29.241 1.00 0.01 C
ATOM 18 C6 A B 502 -30.559-104.556 30.247 1.00 0.01 C
ATOM 19 N6 A B 502 -29.525-104.882 31.030 1.00 0.01 N
ATOM 20 N1 A B 502 -31.139-103.365 30.423 1.00 0.01 N
ATOM 21 C2 A B 502 -32.166-103.021 29.661 1.00 0.01 C
ATOM 22 N3 A B 502 -32.756-103.690 28.703 1.00 0.01 N
ATOM 23 C4 A B 502 -32.168-104.864 28.533 1.00 0.01 C
ATOM 24 P A B 503 -36.143-106.462 22.677 1.00 27.93 P
ATOM 25 OP1 A B 503 -35.476-107.593 22.022 1.00 27.93 O
ATOM 26 OP2 A B 503 -36.609-105.347 21.866 1.00 27.93 O
ATOM 27 O5' A B 503 -37.324-106.995 23.592 1.00 27.93 O
TER
Atoms:
OP1: (-27.421,-98.877,42.878)
OP2: (-29.492,-99.202,41.449)
C3': (-24.859,-99.031,38.145)
C1': (-26.353,-100.167,36.849)
C5': (-26.326,-99.399,40.177)
O4': (-26.553,-100.675,38.144)
C8: (-28.738,-99.615,36.138)
O2': (-25.370,-98.168,35.920)
C6: (-29.413,-101.713,33.449)
C5: (-28.991,-100.947,34.521)
C4: (-27.737,-101.156,35.000)
P: (-28.208,-99.726,41.958)
C4': (-25.597,-100.034,39.025)
C2': (-25.889,-98.753,37.088)
C2: (-27.370,-102.730,33.512)
N1: (-28.569,-102.626,32.951)
N3: (-26.872,-102.050,34.527)
N6: (-30.613,-101.575,32.908)
N7: (-29.621,-99.974,35.243)
N9: (-27.572,-100.298,36.058)
O5': (-27.303,-100.241,40.747)
O3': (-23.748,-99.639,37.493)
OP2: (-29.492,-99.202,41.449)
C3': (-24.859,-99.031,38.145)
C1': (-26.353,-100.167,36.849)
C5': (-26.326,-99.399,40.177)
O4': (-26.553,-100.675,38.144)
C8: (-28.738,-99.615,36.138)
O2': (-25.370,-98.168,35.920)
C6: (-29.413,-101.713,33.449)
C5: (-28.991,-100.947,34.521)
C4: (-27.737,-101.156,35.000)
P: (-28.208,-99.726,41.958)
C4': (-25.597,-100.034,39.025)
C2': (-25.889,-98.753,37.088)
C2: (-27.370,-102.730,33.512)
N1: (-28.569,-102.626,32.951)
N3: (-26.872,-102.050,34.527)
N6: (-30.613,-101.575,32.908)
N7: (-29.621,-99.974,35.243)
N9: (-27.572,-100.298,36.058)
O5': (-27.303,-100.241,40.747)
O3': (-23.748,-99.639,37.493)
OP1: (-35.425,-111.224,25.300)
OP2: (-33.671,-111.366,27.116)
C3': (-34.461,-106.751,24.640)
C1': (-33.623,-105.728,26.652)
C5': (-35.827,-108.466,25.979)
O4': (-34.626,-106.649,27.015)
C8: (-31.643,-106.832,27.839)
O2': (-32.814,-104.900,24.516)
C6: (-30.559,-104.556,30.247)
C5: (-31.098,-105.362,29.241)
C4: (-32.168,-104.864,28.533)
P: (-34.947,-110.828,26.637)
C4': (-35.361,-107.042,25.840)
C2': (-33.213,-106.067,25.222)
C2: (-32.166,-103.021,29.661)
N1: (-31.139,-103.365,30.423)
N3: (-32.756,-103.690,28.703)
N6: (-29.525,-104.882,31.030)
N7: (-30.768,-106.617,28.790)
N9: (-32.527,-105.815,27.626)
O5': (-34.942,-109.247,26.754)
O3': (-35.123,-105.864,23.742)
OP2: (-33.671,-111.366,27.116)
C3': (-34.461,-106.751,24.640)
C1': (-33.623,-105.728,26.652)
C5': (-35.827,-108.466,25.979)
O4': (-34.626,-106.649,27.015)
C8: (-31.643,-106.832,27.839)
O2': (-32.814,-104.900,24.516)
C6: (-30.559,-104.556,30.247)
C5: (-31.098,-105.362,29.241)
C4: (-32.168,-104.864,28.533)
P: (-34.947,-110.828,26.637)
C4': (-35.361,-107.042,25.840)
C2': (-33.213,-106.067,25.222)
C2: (-32.166,-103.021,29.661)
N1: (-31.139,-103.365,30.423)
N3: (-32.756,-103.690,28.703)
N6: (-29.525,-104.882,31.030)
N7: (-30.768,-106.617,28.790)
N9: (-32.527,-105.815,27.626)
O5': (-34.942,-109.247,26.754)
O3': (-35.123,-105.864,23.742)
Image (generated by PyMOL):