ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A493:A516

Extra

PDB:
ATOM 1 O3' A A 492 37.588-103.274 -45.125 1.00 41.42 O
ATOM 2 P A A 493 37.133-102.009 -44.269 1.00 55.70 P
ATOM 3 OP1 A A 493 36.164-101.256 -45.087 1.00 62.96 O
ATOM 4 OP2 A A 493 38.374-101.323 -43.827 1.00 66.60 O
ATOM 5 O5' A A 493 36.374-102.660 -43.030 1.00 56.26 O
ATOM 6 C5' A A 493 35.233-102.021 -42.464 1.00 61.85 C
ATOM 7 C4' A A 493 34.698-102.760 -41.259 1.00 57.74 C
ATOM 8 O4' A A 493 35.814-103.260 -40.471 1.00 49.24 O
ATOM 9 C3' A A 493 33.865-101.896 -40.305 1.00 58.17 C
ATOM 10 O3' A A 493 32.878-102.696 -39.643 1.00 64.56 O
ATOM 11 C2' A A 493 34.913-101.481 -39.274 1.00 57.23 C
ATOM 12 O2' A A 493 34.382-101.085 -38.025 1.00 83.09 O
ATOM 13 C1' A A 493 35.692-102.776 -39.151 1.00 55.48 C
ATOM 14 N9 A A 493 37.019-102.648 -38.538 1.00 55.62 N
ATOM 15 C8 A A 493 38.019-101.730 -38.697 1.00 60.66 C
ATOM 16 N7 A A 493 39.074-101.963 -37.942 1.00 61.54 N
ATOM 17 C5 A A 493 38.738-103.092 -37.214 1.00 57.91 C
ATOM 18 C6 A A 493 39.416-103.848 -36.232 1.00 60.69 C
ATOM 19 N6 A A 493 40.649-103.570 -35.775 1.00 59.06 N
ATOM 20 N1 A A 493 38.780-104.921 -35.721 1.00 47.83 N
ATOM 21 C2 A A 493 37.563-105.201 -36.173 1.00 49.37 C
ATOM 22 N3 A A 493 36.830-104.578 -37.085 1.00 54.12 N
ATOM 23 C4 A A 493 37.477-103.512 -37.570 1.00 54.77 C
ATOM 24 P A A 494 31.721-103.482 -40.437 1.00 56.92 P
ATOM 25 OP1 A A 494 32.035-103.421 -41.878 1.00 56.89 O
ATOM 26 OP2 A A 494 30.432-102.936 -39.960 1.00 66.73 O
ATOM 27 O5' A A 494 31.902-104.971 -39.907 1.00 46.90 O
TER

ATOM 1 O3' A B 515 47.720-112.569 -31.298 1.00 39.82 O
ATOM 2 P A B 516 46.669-112.324 -30.120 1.00 53.46 P
ATOM 3 OP1 A B 516 47.388-112.494 -28.845 1.00 47.84 O
ATOM 4 OP2 A B 516 45.492-113.192 -30.388 1.00 71.23 O
ATOM 5 O5' A B 516 46.269-110.801 -30.314 1.00 53.47 O
ATOM 6 C5' A B 516 47.199-109.771 -30.071 1.00 50.00 C
ATOM 7 C4' A B 516 46.532-108.552 -29.496 1.00 62.82 C
ATOM 8 O4' A B 516 45.590-108.007 -30.469 1.00 62.52 O
ATOM 9 C3' A B 516 45.746-108.776 -28.197 1.00 65.15 C
ATOM 10 O3' A B 516 46.103-107.780 -27.227 1.00 75.28 O
ATOM 11 C2' A B 516 44.277-108.599 -28.621 1.00 66.97 C
ATOM 12 O2' A B 516 43.430-108.070 -27.621 1.00 70.32 O
ATOM 13 C1' A B 516 44.391-107.652 -29.810 1.00 64.18 C
ATOM 14 N9 A B 516 43.276-107.756 -30.760 1.00 62.51 N
ATOM 15 C8 A B 516 42.375-108.784 -30.879 1.00 61.41 C
ATOM 16 N7 A B 516 41.474-108.577 -31.805 1.00 60.59 N
ATOM 17 C5 A B 516 41.786-107.323 -32.311 1.00 52.41 C
ATOM 18 C6 A B 516 41.208-106.534 -33.316 1.00 52.75 C
ATOM 19 N6 A B 516 40.134-106.883 -34.040 1.00 51.96 N
ATOM 20 N1 A B 516 41.774-105.347 -33.572 1.00 50.23 N
ATOM 21 C2 A B 516 42.838-105.005 -32.858 1.00 53.11 C
ATOM 22 N3 A B 516 43.476-105.652 -31.897 1.00 54.56 N
ATOM 23 C4 A B 516 42.885-106.814 -31.671 1.00 50.12 C
ATOM 24 P U B 517 46.672-108.226 -25.782 1.00 51.50 P
ATOM 25 OP1 U B 517 47.082-109.659 -25.886 1.00 71.54 O
ATOM 26 OP2 U B 517 45.649-107.850 -24.783 1.00 92.42 O
ATOM 27 O5' U B 517 47.954-107.313 -25.612 1.00108.62 O
TER

Atoms:
OP1: (36.164,-101.256,-45.087)
OP2: (38.374,-101.323,-43.827)
C3': (33.865,-101.896,-40.305)
C1': (35.692,-102.776,-39.151)
C5': (35.233,-102.021,-42.464)
O4': (35.814,-103.260,-40.471)
C8: (38.019,-101.730,-38.697)
O2': (34.382,-101.085,-38.025)
C6: (39.416,-103.848,-36.232)
C5: (38.738,-103.092,-37.214)
C4: (37.477,-103.512,-37.570)
P: (37.133,-102.009,-44.269)
C4': (34.698,-102.760,-41.259)
C2': (34.913,-101.481,-39.274)
C2: (37.563,-105.201,-36.173)
N1: (38.780,-104.921,-35.721)
N3: (36.830,-104.578,-37.085)
N6: (40.649,-103.570,-35.775)
N7: (39.074,-101.963,-37.942)
N9: (37.019,-102.648,-38.538)
O5': (36.374,-102.660,-43.030)
O3': (32.878,-102.696,-39.643)
OP1: (47.388,-112.494,-28.845)
OP2: (45.492,-113.192,-30.388)
C3': (45.746,-108.776,-28.197)
C1': (44.391,-107.652,-29.810)
C5': (47.199,-109.771,-30.071)
O4': (45.590,-108.007,-30.469)
C8: (42.375,-108.784,-30.879)
O2': (43.430,-108.070,-27.621)
C6: (41.208,-106.534,-33.316)
C5: (41.786,-107.323,-32.311)
C4: (42.885,-106.814,-31.671)
P: (46.669,-112.324,-30.120)
C4': (46.532,-108.552,-29.496)
C2': (44.277,-108.599,-28.621)
C2: (42.838,-105.005,-32.858)
N1: (41.774,-105.347,-33.572)
N3: (43.476,-105.652,-31.897)
N6: (40.134,-106.883,-34.040)
N7: (41.474,-108.577,-31.805)
N9: (43.276,-107.756,-30.760)
O5': (46.269,-110.801,-30.314)
O3': (46.103,-107.780,-27.227)
Image (generated by PyMOL):
PyMOL image
show in jmol