ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KXK:A10:A9

Extra

PDB:
ATOM 1 O3' U A 9 -24.255 39.953 168.037 1.00 91.33 O
ATOM 2 P C A 10 -24.365 41.336 168.812 1.00 93.85 P
ATOM 3 OP1 C A 10 -23.348 41.362 169.897 1.00 93.30 O
ATOM 4 OP2 C A 10 -25.792 41.565 169.137 1.00 93.90 O
ATOM 5 O5' C A 10 -23.910 42.367 167.689 1.00 96.39 O
ATOM 6 C5' C A 10 -24.829 42.885 166.730 1.00 98.88 C
ATOM 7 C4' C A 10 -24.946 44.372 166.926 1.00100.74 C
ATOM 8 O4' C A 10 -23.691 45.011 166.639 1.00101.13 O
ATOM 9 C3' C A 10 -25.920 45.181 166.093 1.00102.16 C
ATOM 10 O3' C A 10 -27.196 45.031 166.707 1.00102.64 O
ATOM 11 C2' C A 10 -25.413 46.614 166.319 1.00103.12 C
ATOM 12 O2' C A 10 -25.938 47.194 167.504 1.00106.77 O
ATOM 13 C1' C A 10 -23.926 46.396 166.602 1.00100.96 C
ATOM 14 N1 C A 10 -22.922 47.066 165.772 1.00 97.38 N
ATOM 15 C2 C A 10 -22.495 48.330 166.169 1.00 94.66 C
ATOM 16 O2 C A 10 -23.065 48.875 167.118 1.00 93.34 O
ATOM 17 N3 C A 10 -21.484 48.925 165.514 1.00 93.68 N
ATOM 18 C4 C A 10 -20.916 48.313 164.479 1.00 94.90 C
ATOM 19 N4 C A 10 -19.878 48.916 163.891 1.00 95.40 N
ATOM 20 C5 C A 10 -21.376 47.047 164.005 1.00 96.37 C
ATOM 21 C6 C A 10 -22.379 46.466 164.674 1.00 97.44 C
ATOM 22 P G A 11 -28.527 45.355 165.886 1.00102.58 P
ATOM 23 OP1 G A 11 -29.594 44.557 166.535 1.00103.62 O
ATOM 24 OP2 G A 11 -28.211 45.145 164.444 1.00103.40 O
ATOM 25 O5' G A 11 -28.802 46.904 166.171 1.00101.72 O
TER

ATOM 1 O3' A B 8 -23.097 41.247 161.958 1.00 79.26 O
ATOM 2 P U B 9 -23.417 41.977 163.320 1.00 83.07 P
ATOM 3 OP1 U B 9 -24.849 42.337 163.382 1.00 84.99 O
ATOM 4 OP2 U B 9 -22.384 43.038 163.425 1.00 84.73 O
ATOM 5 O5' U B 9 -23.117 40.863 164.417 1.00 85.50 O
ATOM 6 C5' U B 9 -24.112 39.926 164.811 1.00 87.63 C
ATOM 7 C4' U B 9 -23.591 39.037 165.925 1.00 90.04 C
ATOM 8 O4' U B 9 -22.382 38.362 165.494 1.00 91.47 O
ATOM 9 C3' U B 9 -23.151 39.737 167.192 1.00 89.95 C
ATOM 10 O3' U B 9 -24.255 39.953 168.037 1.00 91.33 O
ATOM 11 C2' U B 9 -22.236 38.715 167.839 1.00 90.81 C
ATOM 12 O2' U B 9 -22.989 37.754 168.536 1.00 92.52 O
ATOM 13 C1' U B 9 -21.583 38.061 166.623 1.00 91.66 C
ATOM 14 N1 U B 9 -20.215 38.522 166.369 1.00 93.01 N
ATOM 15 C2 U B 9 -19.207 38.004 167.155 1.00 94.42 C
ATOM 16 O2 U B 9 -19.410 37.200 168.046 1.00 94.95 O
ATOM 17 N3 U B 9 -17.950 38.463 166.861 1.00 95.43 N
ATOM 18 C4 U B 9 -17.608 39.370 165.883 1.00 95.56 C
ATOM 19 O4 U B 9 -16.419 39.637 165.689 1.00 95.14 O
ATOM 20 C5 U B 9 -18.712 39.864 165.120 1.00 95.78 C
ATOM 21 C6 U B 9 -19.946 39.431 165.384 1.00 94.19 C
ATOM 22 P C B 10 -24.365 41.336 168.812 1.00 93.85 P
ATOM 23 OP1 C B 10 -23.348 41.362 169.897 1.00 93.30 O
ATOM 24 OP2 C B 10 -25.792 41.565 169.137 1.00 93.90 O
ATOM 25 O5' C B 10 -23.910 42.367 167.689 1.00 96.39 O
TER

Atoms:
C2: (-22.495,48.330,166.169)
OP1: (-23.348,41.362,169.897)
OP2: (-25.792,41.565,169.137)
C4: (-20.916,48.313,164.479)
O5': (-23.910,42.367,167.689)
C3': (-25.920,45.181,166.093)
C1': (-23.926,46.396,166.602)
O4': (-23.691,45.011,166.639)
C5': (-24.829,42.885,166.730)
P: (-24.365,41.336,168.812)
O2: (-23.065,48.875,167.118)
C4': (-24.946,44.372,166.926)
C2': (-25.413,46.614,166.319)
O2': (-25.938,47.194,167.504)
N1: (-22.922,47.066,165.772)
N3: (-21.484,48.925,165.514)
N4: (-19.878,48.916,163.891)
C6: (-22.379,46.466,164.674)
C5: (-21.376,47.047,164.005)
O3': (-27.196,45.031,166.707)
C4: (-17.608,39.370,165.883)
N3: (-17.950,38.463,166.861)
OP1: (-24.849,42.337,163.382)
OP2: (-22.384,43.038,163.425)
C2: (-19.207,38.004,167.155)
C1': (-21.583,38.061,166.623)
C3': (-23.151,39.737,167.192)
O5': (-23.117,40.863,164.417)
O4': (-22.382,38.362,165.494)
C5': (-24.112,39.926,164.811)
P: (-23.417,41.977,163.320)
C4': (-23.591,39.037,165.925)
C2': (-22.236,38.715,167.839)
O2': (-22.989,37.754,168.536)
N1: (-20.215,38.522,166.369)
O4: (-16.419,39.637,165.689)
O2: (-19.410,37.200,168.046)
C6: (-19.946,39.431,165.384)
C5: (-18.712,39.864,165.120)
O3': (-24.255,39.953,168.037)
Image (generated by PyMOL):
PyMOL image
show in jmol