ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A906:A1316

Extra

PDB:
ATOM 1 O3' G A 905 212.423 134.243 -13.949 1.00 57.61 O
ATOM 2 P C A 906 213.763 134.859 -14.606 1.00 55.37 P
ATOM 3 OP1 C A 906 214.543 135.493 -13.502 1.00 68.09 O
ATOM 4 OP2 C A 906 213.411 135.660 -15.814 1.00 68.09 O
ATOM 5 O5' C A 906 214.579 133.567 -15.055 1.00 55.37 O
ATOM 6 C5' C A 906 215.125 132.670 -14.066 1.00 55.37 C
ATOM 7 C4' C A 906 215.709 131.451 -14.726 1.00 55.37 C
ATOM 8 O4' C A 906 216.751 131.838 -15.662 1.00 55.37 O
ATOM 9 C3' C A 906 216.350 130.437 -13.779 1.00 55.37 C
ATOM 10 O3' C A 906 216.058 129.137 -14.281 1.00 55.37 O
ATOM 11 C2' C A 906 217.846 130.670 -13.978 1.00 55.37 C
ATOM 12 O2' C A 906 218.622 129.517 -13.720 1.00 55.37 O
ATOM 13 C1' C A 906 217.869 131.003 -15.465 1.00 55.37 C
ATOM 14 N1 C A 906 219.070 131.628 -16.048 1.00 68.09 N
ATOM 15 C2 C A 906 219.340 131.415 -17.413 1.00 68.09 C
ATOM 16 O2 C A 906 218.561 130.715 -18.088 1.00 68.09 O
ATOM 17 N3 C A 906 220.439 131.977 -17.963 1.00 68.09 N
ATOM 18 C4 C A 906 221.248 132.727 -17.217 1.00 68.09 C
ATOM 19 N4 C A 906 222.305 133.281 -17.810 1.00 68.09 N
ATOM 20 C5 C A 906 221.003 132.952 -15.833 1.00 68.09 C
ATOM 21 C6 C A 906 219.911 132.394 -15.296 1.00 68.09 C
ATOM 22 P A A 907 214.706 128.391 -13.846 1.00 69.41 P
ATOM 23 OP1 A A 907 213.663 129.427 -13.588 1.00 37.24 O
ATOM 24 OP2 A A 907 215.061 127.420 -12.774 1.00 37.24 O
ATOM 25 O5' A A 907 214.268 127.641 -15.181 1.00 69.41 O
TER

ATOM 1 O3' C B1315 221.561 134.814 -11.257 1.00 46.10 O
ATOM 2 P U B1316 220.360 135.542 -12.035 1.00 49.61 P
ATOM 3 OP1 U B1316 219.960 136.703 -11.208 1.00 85.88 O
ATOM 4 OP2 U B1316 219.341 134.524 -12.407 1.00 85.88 O
ATOM 5 O5' U B1316 221.025 136.103 -13.368 1.00 49.61 O
ATOM 6 C5' U B1316 222.025 137.116 -13.305 1.00 49.61 C
ATOM 7 C4' U B1316 221.714 138.192 -14.296 1.00 49.61 C
ATOM 8 O4' U B1316 221.898 137.654 -15.627 1.00 49.61 O
ATOM 9 C3' U B1316 220.289 138.746 -14.237 1.00 49.61 C
ATOM 10 O3' U B1316 220.286 140.152 -14.500 1.00 49.61 O
ATOM 11 C2' U B1316 219.602 138.056 -15.410 1.00 49.61 C
ATOM 12 O2' U B1316 218.565 138.843 -15.971 1.00 49.61 O
ATOM 13 C1' U B1316 220.760 137.941 -16.400 1.00 49.61 C
ATOM 14 N1 U B1316 220.639 136.950 -17.482 1.00 85.88 N
ATOM 15 C2 U B1316 221.416 137.146 -18.604 1.00 85.88 C
ATOM 16 O2 U B1316 222.220 138.052 -18.702 1.00 85.88 O
ATOM 17 N3 U B1316 221.218 136.237 -19.611 1.00 85.88 N
ATOM 18 C4 U B1316 220.354 135.168 -19.606 1.00 85.88 C
ATOM 19 O4 U B1316 220.257 134.465 -20.606 1.00 85.88 O
ATOM 20 C5 U B1316 219.609 135.013 -18.403 1.00 85.88 C
ATOM 21 C6 U B1316 219.774 135.883 -17.405 1.00 85.88 C
ATOM 22 P A B1317 220.404 141.194 -13.286 1.00 58.78 P
ATOM 23 OP1 A B1317 219.567 140.706 -12.161 1.00 67.86 O
ATOM 24 OP2 A B1317 220.163 142.548 -13.849 1.00 67.86 O
ATOM 25 O5' A B1317 221.943 141.093 -12.885 1.00 58.78 O
TER

Atoms:
C2: (219.340,131.415,-17.413)
OP1: (214.543,135.493,-13.502)
OP2: (213.411,135.660,-15.814)
C4: (221.248,132.727,-17.217)
O5': (214.579,133.567,-15.055)
C3': (216.350,130.437,-13.779)
C1': (217.869,131.003,-15.465)
O4': (216.751,131.838,-15.662)
C5': (215.125,132.670,-14.066)
P: (213.763,134.859,-14.606)
O2: (218.561,130.715,-18.088)
C4': (215.709,131.451,-14.726)
C2': (217.846,130.670,-13.978)
O2': (218.622,129.517,-13.720)
N1: (219.070,131.628,-16.048)
N3: (220.439,131.977,-17.963)
N4: (222.305,133.281,-17.810)
C6: (219.911,132.394,-15.296)
C5: (221.003,132.952,-15.833)
O3': (216.058,129.137,-14.281)
C4: (220.354,135.168,-19.606)
N3: (221.218,136.237,-19.611)
OP1: (219.960,136.703,-11.208)
OP2: (219.341,134.524,-12.407)
C2: (221.416,137.146,-18.604)
C1': (220.760,137.941,-16.400)
C3': (220.289,138.746,-14.237)
O5': (221.025,136.103,-13.368)
O4': (221.898,137.654,-15.627)
C5': (222.025,137.116,-13.305)
P: (220.360,135.542,-12.035)
C4': (221.714,138.192,-14.296)
C2': (219.602,138.056,-15.410)
O2': (218.565,138.843,-15.971)
N1: (220.639,136.950,-17.482)
O4: (220.257,134.465,-20.606)
O2: (222.220,138.052,-18.702)
C6: (219.774,135.883,-17.405)
C5: (219.609,135.013,-18.403)
O3': (220.286,140.152,-14.500)
Image (generated by PyMOL):
PyMOL image
show in jmol