Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A906:A1321
Extra
PDB:
ATOM 1 O3' G A 905 213.654 134.749 -13.904 1.00 69.66 O
ATOM 2 P C A 906 214.931 135.371 -14.668 1.00 69.91 P
ATOM 3 OP1 C A 906 215.678 136.123 -13.616 1.00 72.18 O
ATOM 4 OP2 C A 906 214.508 136.065 -15.909 1.00 67.90 O
ATOM 5 O5' C A 906 215.796 134.109 -15.057 1.00 70.46 O
ATOM 6 C5' C A 906 216.371 133.278 -14.042 1.00 70.47 C
ATOM 7 C4' C A 906 216.952 132.043 -14.665 1.00 70.89 C
ATOM 8 O4' C A 906 217.992 132.417 -15.613 1.00 71.97 O
ATOM 9 C3' C A 906 217.594 131.060 -13.690 1.00 71.15 C
ATOM 10 O3' C A 906 217.298 129.739 -14.140 1.00 72.51 O
ATOM 11 C2' C A 906 219.086 131.317 -13.890 1.00 70.95 C
ATOM 12 O2' C A 906 219.911 130.222 -13.577 1.00 68.26 O
ATOM 13 C1' C A 906 219.118 131.605 -15.387 1.00 72.82 C
ATOM 14 N1 C A 906 220.319 132.241 -15.958 1.00 76.84 N
ATOM 15 C2 C A 906 220.571 132.091 -17.339 1.00 78.44 C
ATOM 16 O2 C A 906 219.747 131.481 -18.046 1.00 78.15 O
ATOM 17 N3 C A 906 221.703 132.621 -17.865 1.00 80.57 N
ATOM 18 C4 C A 906 222.555 133.291 -17.080 1.00 82.15 C
ATOM 19 N4 C A 906 223.662 133.794 -17.636 1.00 82.88 N
ATOM 20 C5 C A 906 222.310 133.479 -15.687 1.00 82.06 C
ATOM 21 C6 C A 906 221.192 132.944 -15.174 1.00 79.85 C
ATOM 22 P A A 907 215.934 129.012 -13.683 1.00 72.75 P
ATOM 23 OP1 A A 907 214.874 130.068 -13.523 1.00 72.30 O
ATOM 24 OP2 A A 907 216.263 128.080 -12.548 1.00 71.11 O
ATOM 25 O5' A A 907 215.525 128.158 -14.962 1.00 70.06 O
TER
ATOM 1 O3' C B1320 222.808 135.457 -11.195 1.00 74.62 O
ATOM 2 P U B1321 221.620 136.168 -12.008 1.00 74.58 P
ATOM 3 OP1 U B1321 221.271 137.410 -11.280 1.00 75.25 O
ATOM 4 OP2 U B1321 220.587 135.159 -12.296 1.00 75.36 O
ATOM 5 O5' U B1321 222.277 136.632 -13.346 1.00 74.01 O
ATOM 6 C5' U B1321 223.277 137.641 -13.326 1.00 75.23 C
ATOM 7 C4' U B1321 222.944 138.706 -14.323 1.00 76.94 C
ATOM 8 O4' U B1321 223.138 138.177 -15.658 1.00 78.04 O
ATOM 9 C3' U B1321 221.523 139.266 -14.265 1.00 77.42 C
ATOM 10 O3' U B1321 221.555 140.658 -14.562 1.00 77.53 O
ATOM 11 C2' U B1321 220.842 138.576 -15.442 1.00 78.23 C
ATOM 12 O2' U B1321 219.836 139.365 -16.045 1.00 77.76 O
ATOM 13 C1' U B1321 222.002 138.461 -16.425 1.00 79.94 C
ATOM 14 N1 U B1321 221.871 137.467 -17.498 1.00 83.21 N
ATOM 15 C2 U B1321 222.604 137.694 -18.640 1.00 84.85 C
ATOM 16 O2 U B1321 223.402 138.614 -18.739 1.00 85.69 O
ATOM 17 N3 U B1321 222.379 136.804 -19.661 1.00 85.78 N
ATOM 18 C4 U B1321 221.534 135.716 -19.642 1.00 85.78 C
ATOM 19 O4 U B1321 221.407 135.027 -20.655 1.00 86.24 O
ATOM 20 C5 U B1321 220.850 135.520 -18.405 1.00 85.39 C
ATOM 21 C6 U B1321 221.038 136.377 -17.399 1.00 84.17 C
ATOM 22 P A B1322 221.447 141.741 -13.384 1.00 76.46 P
ATOM 23 OP1 A B1322 220.821 141.080 -12.203 1.00 76.77 O
ATOM 24 OP2 A B1322 220.818 142.925 -13.999 1.00 74.97 O
ATOM 25 O5' A B1322 222.975 142.073 -13.045 1.00 78.09 O
TER
ATOM 2 P C A 906 214.931 135.371 -14.668 1.00 69.91 P
ATOM 3 OP1 C A 906 215.678 136.123 -13.616 1.00 72.18 O
ATOM 4 OP2 C A 906 214.508 136.065 -15.909 1.00 67.90 O
ATOM 5 O5' C A 906 215.796 134.109 -15.057 1.00 70.46 O
ATOM 6 C5' C A 906 216.371 133.278 -14.042 1.00 70.47 C
ATOM 7 C4' C A 906 216.952 132.043 -14.665 1.00 70.89 C
ATOM 8 O4' C A 906 217.992 132.417 -15.613 1.00 71.97 O
ATOM 9 C3' C A 906 217.594 131.060 -13.690 1.00 71.15 C
ATOM 10 O3' C A 906 217.298 129.739 -14.140 1.00 72.51 O
ATOM 11 C2' C A 906 219.086 131.317 -13.890 1.00 70.95 C
ATOM 12 O2' C A 906 219.911 130.222 -13.577 1.00 68.26 O
ATOM 13 C1' C A 906 219.118 131.605 -15.387 1.00 72.82 C
ATOM 14 N1 C A 906 220.319 132.241 -15.958 1.00 76.84 N
ATOM 15 C2 C A 906 220.571 132.091 -17.339 1.00 78.44 C
ATOM 16 O2 C A 906 219.747 131.481 -18.046 1.00 78.15 O
ATOM 17 N3 C A 906 221.703 132.621 -17.865 1.00 80.57 N
ATOM 18 C4 C A 906 222.555 133.291 -17.080 1.00 82.15 C
ATOM 19 N4 C A 906 223.662 133.794 -17.636 1.00 82.88 N
ATOM 20 C5 C A 906 222.310 133.479 -15.687 1.00 82.06 C
ATOM 21 C6 C A 906 221.192 132.944 -15.174 1.00 79.85 C
ATOM 22 P A A 907 215.934 129.012 -13.683 1.00 72.75 P
ATOM 23 OP1 A A 907 214.874 130.068 -13.523 1.00 72.30 O
ATOM 24 OP2 A A 907 216.263 128.080 -12.548 1.00 71.11 O
ATOM 25 O5' A A 907 215.525 128.158 -14.962 1.00 70.06 O
TER
ATOM 1 O3' C B1320 222.808 135.457 -11.195 1.00 74.62 O
ATOM 2 P U B1321 221.620 136.168 -12.008 1.00 74.58 P
ATOM 3 OP1 U B1321 221.271 137.410 -11.280 1.00 75.25 O
ATOM 4 OP2 U B1321 220.587 135.159 -12.296 1.00 75.36 O
ATOM 5 O5' U B1321 222.277 136.632 -13.346 1.00 74.01 O
ATOM 6 C5' U B1321 223.277 137.641 -13.326 1.00 75.23 C
ATOM 7 C4' U B1321 222.944 138.706 -14.323 1.00 76.94 C
ATOM 8 O4' U B1321 223.138 138.177 -15.658 1.00 78.04 O
ATOM 9 C3' U B1321 221.523 139.266 -14.265 1.00 77.42 C
ATOM 10 O3' U B1321 221.555 140.658 -14.562 1.00 77.53 O
ATOM 11 C2' U B1321 220.842 138.576 -15.442 1.00 78.23 C
ATOM 12 O2' U B1321 219.836 139.365 -16.045 1.00 77.76 O
ATOM 13 C1' U B1321 222.002 138.461 -16.425 1.00 79.94 C
ATOM 14 N1 U B1321 221.871 137.467 -17.498 1.00 83.21 N
ATOM 15 C2 U B1321 222.604 137.694 -18.640 1.00 84.85 C
ATOM 16 O2 U B1321 223.402 138.614 -18.739 1.00 85.69 O
ATOM 17 N3 U B1321 222.379 136.804 -19.661 1.00 85.78 N
ATOM 18 C4 U B1321 221.534 135.716 -19.642 1.00 85.78 C
ATOM 19 O4 U B1321 221.407 135.027 -20.655 1.00 86.24 O
ATOM 20 C5 U B1321 220.850 135.520 -18.405 1.00 85.39 C
ATOM 21 C6 U B1321 221.038 136.377 -17.399 1.00 84.17 C
ATOM 22 P A B1322 221.447 141.741 -13.384 1.00 76.46 P
ATOM 23 OP1 A B1322 220.821 141.080 -12.203 1.00 76.77 O
ATOM 24 OP2 A B1322 220.818 142.925 -13.999 1.00 74.97 O
ATOM 25 O5' A B1322 222.975 142.073 -13.045 1.00 78.09 O
TER
Atoms:
C2: (220.571,132.091,-17.339)
OP1: (215.678,136.123,-13.616)
OP2: (214.508,136.065,-15.909)
C4: (222.555,133.291,-17.080)
O5': (215.796,134.109,-15.057)
C3': (217.594,131.060,-13.690)
C1': (219.118,131.605,-15.387)
O4': (217.992,132.417,-15.613)
C5': (216.371,133.278,-14.042)
P: (214.931,135.371,-14.668)
O2: (219.747,131.481,-18.046)
C4': (216.952,132.043,-14.665)
C2': (219.086,131.317,-13.890)
O2': (219.911,130.222,-13.577)
N1: (220.319,132.241,-15.958)
N3: (221.703,132.621,-17.865)
N4: (223.662,133.794,-17.636)
C6: (221.192,132.944,-15.174)
C5: (222.310,133.479,-15.687)
O3': (217.298,129.739,-14.140)
OP1: (215.678,136.123,-13.616)
OP2: (214.508,136.065,-15.909)
C4: (222.555,133.291,-17.080)
O5': (215.796,134.109,-15.057)
C3': (217.594,131.060,-13.690)
C1': (219.118,131.605,-15.387)
O4': (217.992,132.417,-15.613)
C5': (216.371,133.278,-14.042)
P: (214.931,135.371,-14.668)
O2: (219.747,131.481,-18.046)
C4': (216.952,132.043,-14.665)
C2': (219.086,131.317,-13.890)
O2': (219.911,130.222,-13.577)
N1: (220.319,132.241,-15.958)
N3: (221.703,132.621,-17.865)
N4: (223.662,133.794,-17.636)
C6: (221.192,132.944,-15.174)
C5: (222.310,133.479,-15.687)
O3': (217.298,129.739,-14.140)
C4: (221.534,135.716,-19.642)
N3: (222.379,136.804,-19.661)
OP1: (221.271,137.410,-11.280)
OP2: (220.587,135.159,-12.296)
C2: (222.604,137.694,-18.640)
C1': (222.002,138.461,-16.425)
C3': (221.523,139.266,-14.265)
O5': (222.277,136.632,-13.346)
O4': (223.138,138.177,-15.658)
C5': (223.277,137.641,-13.326)
P: (221.620,136.168,-12.008)
C4': (222.944,138.706,-14.323)
C2': (220.842,138.576,-15.442)
O2': (219.836,139.365,-16.045)
N1: (221.871,137.467,-17.498)
O4: (221.407,135.027,-20.655)
O2: (223.402,138.614,-18.739)
C6: (221.038,136.377,-17.399)
C5: (220.850,135.520,-18.405)
O3': (221.555,140.658,-14.562)
N3: (222.379,136.804,-19.661)
OP1: (221.271,137.410,-11.280)
OP2: (220.587,135.159,-12.296)
C2: (222.604,137.694,-18.640)
C1': (222.002,138.461,-16.425)
C3': (221.523,139.266,-14.265)
O5': (222.277,136.632,-13.346)
O4': (223.138,138.177,-15.658)
C5': (223.277,137.641,-13.326)
P: (221.620,136.168,-12.008)
C4': (222.944,138.706,-14.323)
C2': (220.842,138.576,-15.442)
O2': (219.836,139.365,-16.045)
N1: (221.871,137.467,-17.498)
O4: (221.407,135.027,-20.655)
O2: (223.402,138.614,-18.739)
C6: (221.038,136.377,-17.399)
C5: (220.850,135.520,-18.405)
O3': (221.555,140.658,-14.562)
Image (generated by PyMOL):