Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:050:076
Extra
PDB:
ATOM 1 O3' A A 49 51.704 163.987 46.457 1.00 54.46 O
ATOM 2 P A A 50 53.164 164.127 47.125 1.00 51.89 P
ATOM 3 OP1 A A 50 53.114 165.227 48.118 1.00 51.02 O
ATOM 4 OP2 A A 50 54.175 164.155 46.041 1.00 52.66 O
ATOM 5 O5' A A 50 53.348 162.757 47.899 1.00 50.07 O
ATOM 6 C5' A A 50 54.063 162.686 49.134 1.00 47.57 C
ATOM 7 C4' A A 50 53.460 161.609 49.999 1.00 46.93 C
ATOM 8 O4' A A 50 52.135 162.020 50.433 1.00 45.63 O
ATOM 9 C3' A A 50 53.223 160.290 49.284 1.00 44.73 C
ATOM 10 O3' A A 50 54.387 159.494 49.242 1.00 43.58 O
ATOM 11 C2' A A 50 52.121 159.665 50.116 1.00 45.49 C
ATOM 12 O2' A A 50 52.623 159.089 51.302 1.00 47.07 O
ATOM 13 C1' A A 50 51.266 160.896 50.437 1.00 46.28 C
ATOM 14 N9 A A 50 50.246 161.120 49.415 1.00 47.01 N
ATOM 15 C8 A A 50 50.183 162.146 48.503 1.00 47.37 C
ATOM 16 N7 A A 50 49.179 162.050 47.669 1.00 47.84 N
ATOM 17 C5 A A 50 48.528 160.889 48.062 1.00 48.55 C
ATOM 18 C6 A A 50 47.398 160.225 47.561 1.00 48.63 C
ATOM 19 N6 A A 50 46.694 160.654 46.517 1.00 47.74 N
ATOM 20 N1 A A 50 47.013 159.085 48.178 1.00 50.44 N
ATOM 21 C2 A A 50 47.723 158.654 49.230 1.00 49.80 C
ATOM 22 N3 A A 50 48.804 159.191 49.793 1.00 49.51 N
ATOM 23 C4 A A 50 49.163 160.317 49.151 1.00 48.41 C
ATOM 24 P G A 51 54.609 158.484 48.021 1.00 47.15 P
ATOM 25 OP1 G A 51 55.953 157.879 48.190 1.00 47.26 O
ATOM 26 OP2 G A 51 54.282 159.186 46.755 1.00 46.53 O
ATOM 27 O5' G A 51 53.519 157.356 48.282 1.00 47.78 O
TER
ATOM 1 O3' C B 75 39.000 152.625 42.364 1.00 64.00 O
ATOM 2 P A B 76 38.095 153.357 43.472 1.00 66.70 P
ATOM 3 OP1 A B 76 38.795 153.228 44.778 1.00 66.41 O
ATOM 4 OP2 A B 76 36.703 152.856 43.332 1.00 67.03 O
ATOM 5 O5' A B 76 38.116 154.894 43.052 1.00 67.13 O
ATOM 6 C5' A B 76 37.183 155.831 43.625 1.00 67.81 C
ATOM 7 C4' A B 76 37.718 157.238 43.513 1.00 69.19 C
ATOM 8 O4' A B 76 38.786 157.442 44.478 1.00 68.59 O
ATOM 9 C3' A B 76 38.302 157.610 42.154 1.00 70.69 C
ATOM 10 O3' A B 76 38.099 159.000 41.932 1.00 75.42 O
ATOM 11 C2' A B 76 39.791 157.363 42.367 1.00 69.55 C
ATOM 12 O2' A B 76 40.595 158.112 41.482 1.00 69.64 O
ATOM 13 C1' A B 76 39.954 157.862 43.801 1.00 68.29 C
ATOM 14 N9 A B 76 41.119 157.366 44.533 1.00 66.88 N
ATOM 15 C8 A B 76 41.351 156.104 45.018 1.00 66.50 C
ATOM 16 N7 A B 76 42.474 155.993 45.685 1.00 66.30 N
ATOM 17 C5 A B 76 43.024 157.265 45.627 1.00 66.60 C
ATOM 18 C6 A B 76 44.206 157.812 46.157 1.00 66.54 C
ATOM 19 N6 A B 76 45.081 157.123 46.897 1.00 66.03 N
ATOM 20 N1 A B 76 44.461 159.111 45.905 1.00 66.91 N
ATOM 21 C2 A B 76 43.581 159.808 45.178 1.00 67.17 C
ATOM 22 N3 A B 76 42.433 159.412 44.639 1.00 66.72 N
ATOM 23 C4 A B 76 42.209 158.115 44.904 1.00 66.75 C
ATOM 24 P C B 77 36.945 159.494 40.931 1.00 79.09 P
ATOM 25 OP1 C B 77 36.471 158.349 40.102 1.00 78.10 O
ATOM 26 OP2 C B 77 37.449 160.726 40.264 1.00 76.83 O
ATOM 27 O5' C B 77 35.756 159.919 41.900 1.00 79.69 O
TER
ATOM 2 P A A 50 53.164 164.127 47.125 1.00 51.89 P
ATOM 3 OP1 A A 50 53.114 165.227 48.118 1.00 51.02 O
ATOM 4 OP2 A A 50 54.175 164.155 46.041 1.00 52.66 O
ATOM 5 O5' A A 50 53.348 162.757 47.899 1.00 50.07 O
ATOM 6 C5' A A 50 54.063 162.686 49.134 1.00 47.57 C
ATOM 7 C4' A A 50 53.460 161.609 49.999 1.00 46.93 C
ATOM 8 O4' A A 50 52.135 162.020 50.433 1.00 45.63 O
ATOM 9 C3' A A 50 53.223 160.290 49.284 1.00 44.73 C
ATOM 10 O3' A A 50 54.387 159.494 49.242 1.00 43.58 O
ATOM 11 C2' A A 50 52.121 159.665 50.116 1.00 45.49 C
ATOM 12 O2' A A 50 52.623 159.089 51.302 1.00 47.07 O
ATOM 13 C1' A A 50 51.266 160.896 50.437 1.00 46.28 C
ATOM 14 N9 A A 50 50.246 161.120 49.415 1.00 47.01 N
ATOM 15 C8 A A 50 50.183 162.146 48.503 1.00 47.37 C
ATOM 16 N7 A A 50 49.179 162.050 47.669 1.00 47.84 N
ATOM 17 C5 A A 50 48.528 160.889 48.062 1.00 48.55 C
ATOM 18 C6 A A 50 47.398 160.225 47.561 1.00 48.63 C
ATOM 19 N6 A A 50 46.694 160.654 46.517 1.00 47.74 N
ATOM 20 N1 A A 50 47.013 159.085 48.178 1.00 50.44 N
ATOM 21 C2 A A 50 47.723 158.654 49.230 1.00 49.80 C
ATOM 22 N3 A A 50 48.804 159.191 49.793 1.00 49.51 N
ATOM 23 C4 A A 50 49.163 160.317 49.151 1.00 48.41 C
ATOM 24 P G A 51 54.609 158.484 48.021 1.00 47.15 P
ATOM 25 OP1 G A 51 55.953 157.879 48.190 1.00 47.26 O
ATOM 26 OP2 G A 51 54.282 159.186 46.755 1.00 46.53 O
ATOM 27 O5' G A 51 53.519 157.356 48.282 1.00 47.78 O
TER
ATOM 1 O3' C B 75 39.000 152.625 42.364 1.00 64.00 O
ATOM 2 P A B 76 38.095 153.357 43.472 1.00 66.70 P
ATOM 3 OP1 A B 76 38.795 153.228 44.778 1.00 66.41 O
ATOM 4 OP2 A B 76 36.703 152.856 43.332 1.00 67.03 O
ATOM 5 O5' A B 76 38.116 154.894 43.052 1.00 67.13 O
ATOM 6 C5' A B 76 37.183 155.831 43.625 1.00 67.81 C
ATOM 7 C4' A B 76 37.718 157.238 43.513 1.00 69.19 C
ATOM 8 O4' A B 76 38.786 157.442 44.478 1.00 68.59 O
ATOM 9 C3' A B 76 38.302 157.610 42.154 1.00 70.69 C
ATOM 10 O3' A B 76 38.099 159.000 41.932 1.00 75.42 O
ATOM 11 C2' A B 76 39.791 157.363 42.367 1.00 69.55 C
ATOM 12 O2' A B 76 40.595 158.112 41.482 1.00 69.64 O
ATOM 13 C1' A B 76 39.954 157.862 43.801 1.00 68.29 C
ATOM 14 N9 A B 76 41.119 157.366 44.533 1.00 66.88 N
ATOM 15 C8 A B 76 41.351 156.104 45.018 1.00 66.50 C
ATOM 16 N7 A B 76 42.474 155.993 45.685 1.00 66.30 N
ATOM 17 C5 A B 76 43.024 157.265 45.627 1.00 66.60 C
ATOM 18 C6 A B 76 44.206 157.812 46.157 1.00 66.54 C
ATOM 19 N6 A B 76 45.081 157.123 46.897 1.00 66.03 N
ATOM 20 N1 A B 76 44.461 159.111 45.905 1.00 66.91 N
ATOM 21 C2 A B 76 43.581 159.808 45.178 1.00 67.17 C
ATOM 22 N3 A B 76 42.433 159.412 44.639 1.00 66.72 N
ATOM 23 C4 A B 76 42.209 158.115 44.904 1.00 66.75 C
ATOM 24 P C B 77 36.945 159.494 40.931 1.00 79.09 P
ATOM 25 OP1 C B 77 36.471 158.349 40.102 1.00 78.10 O
ATOM 26 OP2 C B 77 37.449 160.726 40.264 1.00 76.83 O
ATOM 27 O5' C B 77 35.756 159.919 41.900 1.00 79.69 O
TER
Atoms:
OP1: (53.114,165.227,48.118)
OP2: (54.175,164.155,46.041)
C3': (53.223,160.290,49.284)
C1': (51.266,160.896,50.437)
C5': (54.063,162.686,49.134)
O4': (52.135,162.020,50.433)
C8: (50.183,162.146,48.503)
O2': (52.623,159.089,51.302)
C6: (47.398,160.225,47.561)
C5: (48.528,160.889,48.062)
C4: (49.163,160.317,49.151)
P: (53.164,164.127,47.125)
C4': (53.460,161.609,49.999)
C2': (52.121,159.665,50.116)
C2: (47.723,158.654,49.230)
N1: (47.013,159.085,48.178)
N3: (48.804,159.191,49.793)
N6: (46.694,160.654,46.517)
N7: (49.179,162.050,47.669)
N9: (50.246,161.120,49.415)
O5': (53.348,162.757,47.899)
O3': (54.387,159.494,49.242)
OP2: (54.175,164.155,46.041)
C3': (53.223,160.290,49.284)
C1': (51.266,160.896,50.437)
C5': (54.063,162.686,49.134)
O4': (52.135,162.020,50.433)
C8: (50.183,162.146,48.503)
O2': (52.623,159.089,51.302)
C6: (47.398,160.225,47.561)
C5: (48.528,160.889,48.062)
C4: (49.163,160.317,49.151)
P: (53.164,164.127,47.125)
C4': (53.460,161.609,49.999)
C2': (52.121,159.665,50.116)
C2: (47.723,158.654,49.230)
N1: (47.013,159.085,48.178)
N3: (48.804,159.191,49.793)
N6: (46.694,160.654,46.517)
N7: (49.179,162.050,47.669)
N9: (50.246,161.120,49.415)
O5': (53.348,162.757,47.899)
O3': (54.387,159.494,49.242)
OP1: (38.795,153.228,44.778)
OP2: (36.703,152.856,43.332)
C3': (38.302,157.610,42.154)
C1': (39.954,157.862,43.801)
C5': (37.183,155.831,43.625)
O4': (38.786,157.442,44.478)
C8: (41.351,156.104,45.018)
O2': (40.595,158.112,41.482)
C6: (44.206,157.812,46.157)
C5: (43.024,157.265,45.627)
C4: (42.209,158.115,44.904)
P: (38.095,153.357,43.472)
C4': (37.718,157.238,43.513)
C2': (39.791,157.363,42.367)
C2: (43.581,159.808,45.178)
N1: (44.461,159.111,45.905)
N3: (42.433,159.412,44.639)
N6: (45.081,157.123,46.897)
N7: (42.474,155.993,45.685)
N9: (41.119,157.366,44.533)
O5': (38.116,154.894,43.052)
O3': (38.099,159.000,41.932)
OP2: (36.703,152.856,43.332)
C3': (38.302,157.610,42.154)
C1': (39.954,157.862,43.801)
C5': (37.183,155.831,43.625)
O4': (38.786,157.442,44.478)
C8: (41.351,156.104,45.018)
O2': (40.595,158.112,41.482)
C6: (44.206,157.812,46.157)
C5: (43.024,157.265,45.627)
C4: (42.209,158.115,44.904)
P: (38.095,153.357,43.472)
C4': (37.718,157.238,43.513)
C2': (39.791,157.363,42.367)
C2: (43.581,159.808,45.178)
N1: (44.461,159.111,45.905)
N3: (42.433,159.412,44.639)
N6: (45.081,157.123,46.897)
N7: (42.474,155.993,45.685)
N9: (41.119,157.366,44.533)
O5': (38.116,154.894,43.052)
O3': (38.099,159.000,41.932)
Image (generated by PyMOL):