Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0474:0499
Extra
PDB:
ATOM 1 O3' A A 473 24.528 162.243 48.788 1.00 50.42 O
ATOM 2 P A A 474 23.917 163.225 47.672 1.00 50.09 P
ATOM 3 OP1 A A 474 23.905 162.539 46.354 1.00 48.57 O
ATOM 4 OP2 A A 474 24.608 164.528 47.809 1.00 51.08 O
ATOM 5 O5' A A 474 22.417 163.410 48.179 1.00 49.14 O
ATOM 6 C5' A A 474 21.577 162.268 48.389 1.00 48.30 C
ATOM 7 C4' A A 474 20.475 162.587 49.368 1.00 49.82 C
ATOM 8 O4' A A 474 19.472 161.540 49.282 1.00 50.85 O
ATOM 9 C3' A A 474 20.868 162.652 50.837 1.00 50.75 C
ATOM 10 O3' A A 474 21.291 163.967 51.205 1.00 54.57 O
ATOM 11 C2' A A 474 19.573 162.253 51.533 1.00 50.53 C
ATOM 12 O2' A A 474 18.643 163.311 51.614 1.00 52.30 O
ATOM 13 C1' A A 474 19.029 161.187 50.578 1.00 50.41 C
ATOM 14 N9 A A 474 19.543 159.850 50.884 1.00 49.86 N
ATOM 15 C8 A A 474 20.446 159.100 50.166 1.00 49.53 C
ATOM 16 N7 A A 474 20.774 157.974 50.743 1.00 47.53 N
ATOM 17 C5 A A 474 20.026 157.972 51.911 1.00 48.63 C
ATOM 18 C6 A A 474 19.941 157.066 52.969 1.00 49.95 C
ATOM 19 N6 A A 474 20.657 155.940 53.033 1.00 52.16 N
ATOM 20 N1 A A 474 19.091 157.356 53.979 1.00 49.20 N
ATOM 21 C2 A A 474 18.387 158.489 53.917 1.00 47.05 C
ATOM 22 N3 A A 474 18.389 159.425 52.982 1.00 47.45 N
ATOM 23 C4 A A 474 19.242 159.105 51.995 1.00 48.72 C
ATOM 24 P G A 475 21.997 164.232 52.639 1.00 57.31 P
ATOM 25 OP1 G A 475 21.553 163.202 53.618 1.00 57.30 O
ATOM 26 OP2 G A 475 21.830 165.670 52.981 1.00 56.15 O
ATOM 27 O5' G A 475 23.545 164.015 52.337 1.00 55.46 O
TER
ATOM 1 O3' U B 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 2 P A B 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 3 OP1 A B 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 4 OP2 A B 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 5 O5' A B 499 20.007 149.753 62.960 1.00 71.62 O
ATOM 6 C5' A B 499 20.736 150.991 62.863 1.00 63.62 C
ATOM 7 C4' A B 499 21.705 150.945 61.704 1.00 59.15 C
ATOM 8 O4' A B 499 20.979 150.724 60.467 1.00 57.68 O
ATOM 9 C3' A B 499 22.464 152.237 61.451 1.00 56.60 C
ATOM 10 O3' A B 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 11 C2' A B 499 22.853 152.098 59.990 1.00 55.27 C
ATOM 12 O2' A B 499 23.941 151.227 59.819 1.00 56.04 O
ATOM 13 C1' A B 499 21.601 151.442 59.411 1.00 55.15 C
ATOM 14 N9 A B 499 20.656 152.433 58.896 1.00 53.36 N
ATOM 15 C8 A B 499 19.503 152.898 59.476 1.00 53.01 C
ATOM 16 N7 A B 499 18.894 153.820 58.776 1.00 52.05 N
ATOM 17 C5 A B 499 19.692 153.967 57.653 1.00 52.68 C
ATOM 18 C6 A B 499 19.596 154.799 56.524 1.00 52.36 C
ATOM 19 N6 A B 499 18.611 155.671 56.330 1.00 52.17 N
ATOM 20 N1 A B 499 20.562 154.703 55.589 1.00 52.61 N
ATOM 21 C2 A B 499 21.550 153.827 55.780 1.00 53.80 C
ATOM 22 N3 A B 499 21.751 152.989 56.795 1.00 54.04 N
ATOM 23 C4 A B 499 20.776 153.112 57.710 1.00 53.13 C
ATOM 24 P G B 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 25 OP1 G B 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 26 OP2 G B 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 27 O5' G B 500 24.208 154.762 62.076 1.00 52.16 O
TER
ATOM 2 P A A 474 23.917 163.225 47.672 1.00 50.09 P
ATOM 3 OP1 A A 474 23.905 162.539 46.354 1.00 48.57 O
ATOM 4 OP2 A A 474 24.608 164.528 47.809 1.00 51.08 O
ATOM 5 O5' A A 474 22.417 163.410 48.179 1.00 49.14 O
ATOM 6 C5' A A 474 21.577 162.268 48.389 1.00 48.30 C
ATOM 7 C4' A A 474 20.475 162.587 49.368 1.00 49.82 C
ATOM 8 O4' A A 474 19.472 161.540 49.282 1.00 50.85 O
ATOM 9 C3' A A 474 20.868 162.652 50.837 1.00 50.75 C
ATOM 10 O3' A A 474 21.291 163.967 51.205 1.00 54.57 O
ATOM 11 C2' A A 474 19.573 162.253 51.533 1.00 50.53 C
ATOM 12 O2' A A 474 18.643 163.311 51.614 1.00 52.30 O
ATOM 13 C1' A A 474 19.029 161.187 50.578 1.00 50.41 C
ATOM 14 N9 A A 474 19.543 159.850 50.884 1.00 49.86 N
ATOM 15 C8 A A 474 20.446 159.100 50.166 1.00 49.53 C
ATOM 16 N7 A A 474 20.774 157.974 50.743 1.00 47.53 N
ATOM 17 C5 A A 474 20.026 157.972 51.911 1.00 48.63 C
ATOM 18 C6 A A 474 19.941 157.066 52.969 1.00 49.95 C
ATOM 19 N6 A A 474 20.657 155.940 53.033 1.00 52.16 N
ATOM 20 N1 A A 474 19.091 157.356 53.979 1.00 49.20 N
ATOM 21 C2 A A 474 18.387 158.489 53.917 1.00 47.05 C
ATOM 22 N3 A A 474 18.389 159.425 52.982 1.00 47.45 N
ATOM 23 C4 A A 474 19.242 159.105 51.995 1.00 48.72 C
ATOM 24 P G A 475 21.997 164.232 52.639 1.00 57.31 P
ATOM 25 OP1 G A 475 21.553 163.202 53.618 1.00 57.30 O
ATOM 26 OP2 G A 475 21.830 165.670 52.981 1.00 56.15 O
ATOM 27 O5' G A 475 23.545 164.015 52.337 1.00 55.46 O
TER
ATOM 1 O3' U B 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 2 P A B 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 3 OP1 A B 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 4 OP2 A B 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 5 O5' A B 499 20.007 149.753 62.960 1.00 71.62 O
ATOM 6 C5' A B 499 20.736 150.991 62.863 1.00 63.62 C
ATOM 7 C4' A B 499 21.705 150.945 61.704 1.00 59.15 C
ATOM 8 O4' A B 499 20.979 150.724 60.467 1.00 57.68 O
ATOM 9 C3' A B 499 22.464 152.237 61.451 1.00 56.60 C
ATOM 10 O3' A B 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 11 C2' A B 499 22.853 152.098 59.990 1.00 55.27 C
ATOM 12 O2' A B 499 23.941 151.227 59.819 1.00 56.04 O
ATOM 13 C1' A B 499 21.601 151.442 59.411 1.00 55.15 C
ATOM 14 N9 A B 499 20.656 152.433 58.896 1.00 53.36 N
ATOM 15 C8 A B 499 19.503 152.898 59.476 1.00 53.01 C
ATOM 16 N7 A B 499 18.894 153.820 58.776 1.00 52.05 N
ATOM 17 C5 A B 499 19.692 153.967 57.653 1.00 52.68 C
ATOM 18 C6 A B 499 19.596 154.799 56.524 1.00 52.36 C
ATOM 19 N6 A B 499 18.611 155.671 56.330 1.00 52.17 N
ATOM 20 N1 A B 499 20.562 154.703 55.589 1.00 52.61 N
ATOM 21 C2 A B 499 21.550 153.827 55.780 1.00 53.80 C
ATOM 22 N3 A B 499 21.751 152.989 56.795 1.00 54.04 N
ATOM 23 C4 A B 499 20.776 153.112 57.710 1.00 53.13 C
ATOM 24 P G B 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 25 OP1 G B 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 26 OP2 G B 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 27 O5' G B 500 24.208 154.762 62.076 1.00 52.16 O
TER
Atoms:
OP1: (23.905,162.539,46.354)
OP2: (24.608,164.528,47.809)
C3': (20.868,162.652,50.837)
C1': (19.029,161.187,50.578)
C5': (21.577,162.268,48.389)
O4': (19.472,161.540,49.282)
C8: (20.446,159.100,50.166)
O2': (18.643,163.311,51.614)
C6: (19.941,157.066,52.969)
C5: (20.026,157.972,51.911)
C4: (19.242,159.105,51.995)
P: (23.917,163.225,47.672)
C4': (20.475,162.587,49.368)
C2': (19.573,162.253,51.533)
C2: (18.387,158.489,53.917)
N1: (19.091,157.356,53.979)
N3: (18.389,159.425,52.982)
N6: (20.657,155.940,53.033)
N7: (20.774,157.974,50.743)
N9: (19.543,159.850,50.884)
O5': (22.417,163.410,48.179)
O3': (21.291,163.967,51.205)
OP2: (24.608,164.528,47.809)
C3': (20.868,162.652,50.837)
C1': (19.029,161.187,50.578)
C5': (21.577,162.268,48.389)
O4': (19.472,161.540,49.282)
C8: (20.446,159.100,50.166)
O2': (18.643,163.311,51.614)
C6: (19.941,157.066,52.969)
C5: (20.026,157.972,51.911)
C4: (19.242,159.105,51.995)
P: (23.917,163.225,47.672)
C4': (20.475,162.587,49.368)
C2': (19.573,162.253,51.533)
C2: (18.387,158.489,53.917)
N1: (19.091,157.356,53.979)
N3: (18.389,159.425,52.982)
N6: (20.657,155.940,53.033)
N7: (20.774,157.974,50.743)
N9: (19.543,159.850,50.884)
O5': (22.417,163.410,48.179)
O3': (21.291,163.967,51.205)
OP1: (17.909,150.408,64.141)
OP2: (18.789,147.998,64.310)
C3': (22.464,152.237,61.451)
C1': (21.601,151.442,59.411)
C5': (20.736,150.991,62.863)
O4': (20.979,150.724,60.467)
C8: (19.503,152.898,59.476)
O2': (23.941,151.227,59.819)
C6: (19.596,154.799,56.524)
C5: (19.692,153.967,57.653)
C4: (20.776,153.112,57.710)
P: (19.052,149.462,64.206)
C4': (21.705,150.945,61.704)
C2': (22.853,152.098,59.990)
C2: (21.550,153.827,55.780)
N1: (20.562,154.703,55.589)
N3: (21.751,152.989,56.795)
N6: (18.611,155.671,56.330)
N7: (18.894,153.820,58.776)
N9: (20.656,152.433,58.896)
O5': (20.007,149.753,62.960)
O3': (23.604,152.343,62.292)
OP2: (18.789,147.998,64.310)
C3': (22.464,152.237,61.451)
C1': (21.601,151.442,59.411)
C5': (20.736,150.991,62.863)
O4': (20.979,150.724,60.467)
C8: (19.503,152.898,59.476)
O2': (23.941,151.227,59.819)
C6: (19.596,154.799,56.524)
C5: (19.692,153.967,57.653)
C4: (20.776,153.112,57.710)
P: (19.052,149.462,64.206)
C4': (21.705,150.945,61.704)
C2': (22.853,152.098,59.990)
C2: (21.550,153.827,55.780)
N1: (20.562,154.703,55.589)
N3: (21.751,152.989,56.795)
N6: (18.611,155.671,56.330)
N7: (18.894,153.820,58.776)
N9: (20.656,152.433,58.896)
O5': (20.007,149.753,62.960)
O3': (23.604,152.343,62.292)
Image (generated by PyMOL):