Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:050:076
Extra
PDB:
ATOM 1 O3' A A 49 51.654 164.067 46.324 1.00 50.94 O
ATOM 2 P A A 50 53.052 164.227 47.103 1.00 49.99 P
ATOM 3 OP1 A A 50 53.253 165.647 47.481 1.00 49.26 O
ATOM 4 OP2 A A 50 54.110 163.512 46.353 1.00 50.24 O
ATOM 5 O5' A A 50 52.763 163.436 48.445 1.00 49.95 O
ATOM 6 C5' A A 50 53.813 162.948 49.281 1.00 46.46 C
ATOM 7 C4' A A 50 53.294 161.778 50.071 1.00 45.99 C
ATOM 8 O4' A A 50 51.945 162.107 50.518 1.00 45.80 O
ATOM 9 C3' A A 50 53.099 160.514 49.254 1.00 44.21 C
ATOM 10 O3' A A 50 54.298 159.765 49.172 1.00 43.40 O
ATOM 11 C2' A A 50 52.016 159.791 50.032 1.00 44.97 C
ATOM 12 O2' A A 50 52.520 159.171 51.195 1.00 44.12 O
ATOM 13 C1' A A 50 51.112 160.962 50.422 1.00 46.36 C
ATOM 14 N9 A A 50 50.095 161.219 49.401 1.00 47.86 N
ATOM 15 C8 A A 50 50.027 162.269 48.515 1.00 48.96 C
ATOM 16 N7 A A 50 49.022 162.192 47.679 1.00 48.87 N
ATOM 17 C5 A A 50 48.374 161.019 48.044 1.00 49.96 C
ATOM 18 C6 A A 50 47.237 160.365 47.532 1.00 50.05 C
ATOM 19 N6 A A 50 46.519 160.823 46.507 1.00 49.33 N
ATOM 20 N1 A A 50 46.859 159.208 48.119 1.00 50.73 N
ATOM 21 C2 A A 50 47.576 158.750 49.151 1.00 50.06 C
ATOM 22 N3 A A 50 48.660 159.273 49.723 1.00 50.78 N
ATOM 23 C4 A A 50 49.015 160.418 49.113 1.00 49.53 C
ATOM 24 P G A 51 54.475 158.678 48.009 1.00 45.89 P
ATOM 25 OP1 G A 51 55.798 158.042 48.197 1.00 47.93 O
ATOM 26 OP2 G A 51 54.144 159.312 46.705 1.00 44.98 O
ATOM 27 O5' G A 51 53.367 157.586 48.342 1.00 46.42 O
TER
ATOM 1 O3' C B 75 38.874 152.842 42.347 1.00 61.33 O
ATOM 2 P A B 76 38.008 153.593 43.472 1.00 63.91 P
ATOM 3 OP1 A B 76 38.783 153.537 44.739 1.00 64.75 O
ATOM 4 OP2 A B 76 36.628 153.050 43.438 1.00 63.70 O
ATOM 5 O5' A B 76 37.971 155.107 42.977 1.00 64.25 O
ATOM 6 C5' A B 76 37.052 156.060 43.549 1.00 64.52 C
ATOM 7 C4' A B 76 37.609 157.459 43.426 1.00 65.52 C
ATOM 8 O4' A B 76 38.685 157.651 44.386 1.00 65.35 O
ATOM 9 C3' A B 76 38.197 157.814 42.064 1.00 66.97 C
ATOM 10 O3' A B 76 38.042 159.209 41.847 1.00 71.37 O
ATOM 11 C2' A B 76 39.680 157.538 42.272 1.00 65.95 C
ATOM 12 O2' A B 76 40.493 158.268 41.380 1.00 65.93 O
ATOM 13 C1' A B 76 39.859 158.042 43.701 1.00 64.82 C
ATOM 14 N9 A B 76 41.017 157.525 44.428 1.00 63.91 N
ATOM 15 C8 A B 76 41.252 156.246 44.875 1.00 63.58 C
ATOM 16 N7 A B 76 42.373 156.118 45.543 1.00 62.71 N
ATOM 17 C5 A B 76 42.915 157.395 45.531 1.00 63.23 C
ATOM 18 C6 A B 76 44.088 157.928 46.087 1.00 62.54 C
ATOM 19 N6 A B 76 44.954 157.218 46.811 1.00 62.62 N
ATOM 20 N1 A B 76 44.341 159.237 45.879 1.00 63.05 N
ATOM 21 C2 A B 76 43.463 159.956 45.171 1.00 63.18 C
ATOM 22 N3 A B 76 42.320 159.574 44.612 1.00 63.30 N
ATOM 23 C4 A B 76 42.100 158.267 44.831 1.00 63.56 C
ATOM 24 P C B 77 36.871 159.747 40.893 1.00 74.74 P
ATOM 25 OP1 C B 77 36.377 158.628 40.045 1.00 72.96 O
ATOM 26 OP2 C B 77 37.370 160.996 40.249 1.00 70.82 O
ATOM 27 O5' C B 77 35.713 160.137 41.912 1.00 74.95 O
TER
ATOM 2 P A A 50 53.052 164.227 47.103 1.00 49.99 P
ATOM 3 OP1 A A 50 53.253 165.647 47.481 1.00 49.26 O
ATOM 4 OP2 A A 50 54.110 163.512 46.353 1.00 50.24 O
ATOM 5 O5' A A 50 52.763 163.436 48.445 1.00 49.95 O
ATOM 6 C5' A A 50 53.813 162.948 49.281 1.00 46.46 C
ATOM 7 C4' A A 50 53.294 161.778 50.071 1.00 45.99 C
ATOM 8 O4' A A 50 51.945 162.107 50.518 1.00 45.80 O
ATOM 9 C3' A A 50 53.099 160.514 49.254 1.00 44.21 C
ATOM 10 O3' A A 50 54.298 159.765 49.172 1.00 43.40 O
ATOM 11 C2' A A 50 52.016 159.791 50.032 1.00 44.97 C
ATOM 12 O2' A A 50 52.520 159.171 51.195 1.00 44.12 O
ATOM 13 C1' A A 50 51.112 160.962 50.422 1.00 46.36 C
ATOM 14 N9 A A 50 50.095 161.219 49.401 1.00 47.86 N
ATOM 15 C8 A A 50 50.027 162.269 48.515 1.00 48.96 C
ATOM 16 N7 A A 50 49.022 162.192 47.679 1.00 48.87 N
ATOM 17 C5 A A 50 48.374 161.019 48.044 1.00 49.96 C
ATOM 18 C6 A A 50 47.237 160.365 47.532 1.00 50.05 C
ATOM 19 N6 A A 50 46.519 160.823 46.507 1.00 49.33 N
ATOM 20 N1 A A 50 46.859 159.208 48.119 1.00 50.73 N
ATOM 21 C2 A A 50 47.576 158.750 49.151 1.00 50.06 C
ATOM 22 N3 A A 50 48.660 159.273 49.723 1.00 50.78 N
ATOM 23 C4 A A 50 49.015 160.418 49.113 1.00 49.53 C
ATOM 24 P G A 51 54.475 158.678 48.009 1.00 45.89 P
ATOM 25 OP1 G A 51 55.798 158.042 48.197 1.00 47.93 O
ATOM 26 OP2 G A 51 54.144 159.312 46.705 1.00 44.98 O
ATOM 27 O5' G A 51 53.367 157.586 48.342 1.00 46.42 O
TER
ATOM 1 O3' C B 75 38.874 152.842 42.347 1.00 61.33 O
ATOM 2 P A B 76 38.008 153.593 43.472 1.00 63.91 P
ATOM 3 OP1 A B 76 38.783 153.537 44.739 1.00 64.75 O
ATOM 4 OP2 A B 76 36.628 153.050 43.438 1.00 63.70 O
ATOM 5 O5' A B 76 37.971 155.107 42.977 1.00 64.25 O
ATOM 6 C5' A B 76 37.052 156.060 43.549 1.00 64.52 C
ATOM 7 C4' A B 76 37.609 157.459 43.426 1.00 65.52 C
ATOM 8 O4' A B 76 38.685 157.651 44.386 1.00 65.35 O
ATOM 9 C3' A B 76 38.197 157.814 42.064 1.00 66.97 C
ATOM 10 O3' A B 76 38.042 159.209 41.847 1.00 71.37 O
ATOM 11 C2' A B 76 39.680 157.538 42.272 1.00 65.95 C
ATOM 12 O2' A B 76 40.493 158.268 41.380 1.00 65.93 O
ATOM 13 C1' A B 76 39.859 158.042 43.701 1.00 64.82 C
ATOM 14 N9 A B 76 41.017 157.525 44.428 1.00 63.91 N
ATOM 15 C8 A B 76 41.252 156.246 44.875 1.00 63.58 C
ATOM 16 N7 A B 76 42.373 156.118 45.543 1.00 62.71 N
ATOM 17 C5 A B 76 42.915 157.395 45.531 1.00 63.23 C
ATOM 18 C6 A B 76 44.088 157.928 46.087 1.00 62.54 C
ATOM 19 N6 A B 76 44.954 157.218 46.811 1.00 62.62 N
ATOM 20 N1 A B 76 44.341 159.237 45.879 1.00 63.05 N
ATOM 21 C2 A B 76 43.463 159.956 45.171 1.00 63.18 C
ATOM 22 N3 A B 76 42.320 159.574 44.612 1.00 63.30 N
ATOM 23 C4 A B 76 42.100 158.267 44.831 1.00 63.56 C
ATOM 24 P C B 77 36.871 159.747 40.893 1.00 74.74 P
ATOM 25 OP1 C B 77 36.377 158.628 40.045 1.00 72.96 O
ATOM 26 OP2 C B 77 37.370 160.996 40.249 1.00 70.82 O
ATOM 27 O5' C B 77 35.713 160.137 41.912 1.00 74.95 O
TER
Atoms:
OP1: (53.253,165.647,47.481)
OP2: (54.110,163.512,46.353)
C3': (53.099,160.514,49.254)
C1': (51.112,160.962,50.422)
C5': (53.813,162.948,49.281)
O4': (51.945,162.107,50.518)
C8: (50.027,162.269,48.515)
O2': (52.520,159.171,51.195)
C6: (47.237,160.365,47.532)
C5: (48.374,161.019,48.044)
C4: (49.015,160.418,49.113)
P: (53.052,164.227,47.103)
C4': (53.294,161.778,50.071)
C2': (52.016,159.791,50.032)
C2: (47.576,158.750,49.151)
N1: (46.859,159.208,48.119)
N3: (48.660,159.273,49.723)
N6: (46.519,160.823,46.507)
N7: (49.022,162.192,47.679)
N9: (50.095,161.219,49.401)
O5': (52.763,163.436,48.445)
O3': (54.298,159.765,49.172)
OP2: (54.110,163.512,46.353)
C3': (53.099,160.514,49.254)
C1': (51.112,160.962,50.422)
C5': (53.813,162.948,49.281)
O4': (51.945,162.107,50.518)
C8: (50.027,162.269,48.515)
O2': (52.520,159.171,51.195)
C6: (47.237,160.365,47.532)
C5: (48.374,161.019,48.044)
C4: (49.015,160.418,49.113)
P: (53.052,164.227,47.103)
C4': (53.294,161.778,50.071)
C2': (52.016,159.791,50.032)
C2: (47.576,158.750,49.151)
N1: (46.859,159.208,48.119)
N3: (48.660,159.273,49.723)
N6: (46.519,160.823,46.507)
N7: (49.022,162.192,47.679)
N9: (50.095,161.219,49.401)
O5': (52.763,163.436,48.445)
O3': (54.298,159.765,49.172)
OP1: (38.783,153.537,44.739)
OP2: (36.628,153.050,43.438)
C3': (38.197,157.814,42.064)
C1': (39.859,158.042,43.701)
C5': (37.052,156.060,43.549)
O4': (38.685,157.651,44.386)
C8: (41.252,156.246,44.875)
O2': (40.493,158.268,41.380)
C6: (44.088,157.928,46.087)
C5: (42.915,157.395,45.531)
C4: (42.100,158.267,44.831)
P: (38.008,153.593,43.472)
C4': (37.609,157.459,43.426)
C2': (39.680,157.538,42.272)
C2: (43.463,159.956,45.171)
N1: (44.341,159.237,45.879)
N3: (42.320,159.574,44.612)
N6: (44.954,157.218,46.811)
N7: (42.373,156.118,45.543)
N9: (41.017,157.525,44.428)
O5': (37.971,155.107,42.977)
O3': (38.042,159.209,41.847)
OP2: (36.628,153.050,43.438)
C3': (38.197,157.814,42.064)
C1': (39.859,158.042,43.701)
C5': (37.052,156.060,43.549)
O4': (38.685,157.651,44.386)
C8: (41.252,156.246,44.875)
O2': (40.493,158.268,41.380)
C6: (44.088,157.928,46.087)
C5: (42.915,157.395,45.531)
C4: (42.100,158.267,44.831)
P: (38.008,153.593,43.472)
C4': (37.609,157.459,43.426)
C2': (39.680,157.538,42.272)
C2: (43.463,159.956,45.171)
N1: (44.341,159.237,45.879)
N3: (42.320,159.574,44.612)
N6: (44.954,157.218,46.811)
N7: (42.373,156.118,45.543)
N9: (41.017,157.525,44.428)
O5': (37.971,155.107,42.977)
O3': (38.042,159.209,41.847)
Image (generated by PyMOL):