Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21288:21286
Extra
PDB:
ATOM 1 O3' U A1287 -87.647 -23.238 84.176 1.00 80.41 O
ATOM 2 P C A1288 -87.089 -23.969 85.497 1.00 93.94 P
ATOM 3 OP1 C A1288 -85.616 -24.006 85.388 1.00 93.16 O
ATOM 4 OP2 C A1288 -87.816 -25.249 85.646 1.00 94.54 O
ATOM 5 O5' C A1288 -87.522 -22.960 86.643 1.00 94.26 O
ATOM 6 C5' C A1288 -86.589 -22.052 87.214 1.00 93.77 C
ATOM 7 C4' C A1288 -86.558 -22.181 88.712 1.00 94.11 C
ATOM 8 O4' C A1288 -87.922 -22.161 89.193 1.00 94.94 O
ATOM 9 C3' C A1288 -85.944 -23.479 89.234 1.00 94.13 C
ATOM 10 O3' C A1288 -85.372 -23.264 90.529 1.00 94.13 O
ATOM 11 C2' C A1288 -87.154 -24.394 89.360 1.00 94.93 C
ATOM 12 O2' C A1288 -87.001 -25.436 90.302 1.00 95.27 O
ATOM 13 C1' C A1288 -88.263 -23.413 89.766 1.00 95.46 C
ATOM 14 N1 C A1288 -89.596 -23.786 89.252 1.00 96.11 N
ATOM 15 C2 C A1288 -90.307 -24.843 89.812 1.00 96.81 C
ATOM 16 O2 C A1288 -89.795 -25.447 90.771 1.00 96.88 O
ATOM 17 N3 C A1288 -91.521 -25.169 89.277 1.00 97.41 N
ATOM 18 C4 C A1288 -92.011 -24.475 88.239 1.00 97.32 C
ATOM 19 N4 C A1288 -93.193 -24.803 87.730 1.00 97.93 N
ATOM 20 C5 C A1288 -91.307 -23.397 87.651 1.00 96.62 C
ATOM 21 C6 C A1288 -90.117 -23.097 88.189 1.00 96.04 C
ATOM 22 P U A1289 -83.776 -23.272 90.735 1.00115.76 P
ATOM 23 OP1 U A1289 -83.335 -21.850 90.759 1.00115.31 O
ATOM 24 OP2 U A1289 -83.202 -24.183 89.709 1.00115.37 O
ATOM 25 O5' U A1289 -83.614 -23.911 92.187 1.00116.18 O
TER
ATOM 1 O3' U B1285 -89.649 -17.391 86.908 1.00 87.94 O
ATOM 2 P G B1286 -89.396 -18.888 86.411 1.00 86.97 P
ATOM 3 OP1 G B1286 -89.289 -19.737 87.619 1.00 87.26 O
ATOM 4 OP2 G B1286 -88.260 -18.843 85.464 1.00 86.15 O
ATOM 5 O5' G B1286 -90.742 -19.237 85.640 1.00 87.61 O
ATOM 6 C5' G B1286 -91.995 -19.146 86.304 1.00 88.45 C
ATOM 7 C4' G B1286 -93.143 -19.110 85.334 1.00 88.93 C
ATOM 8 O4' G B1286 -93.109 -17.890 84.556 1.00 88.65 O
ATOM 9 C3' G B1286 -93.171 -20.214 84.302 1.00 88.87 C
ATOM 10 O3' G B1286 -93.698 -21.407 84.834 1.00 89.42 O
ATOM 11 C2' G B1286 -94.022 -19.603 83.190 1.00 89.12 C
ATOM 12 O2' G B1286 -95.412 -19.700 83.505 1.00 90.03 O
ATOM 13 C1' G B1286 -93.600 -18.128 83.259 1.00 88.74 C
ATOM 14 N9 G B1286 -92.524 -17.803 82.298 1.00 87.92 N
ATOM 15 C8 G B1286 -91.204 -18.156 82.420 1.00 87.20 C
ATOM 16 N7 G B1286 -90.455 -17.759 81.434 1.00 86.58 N
ATOM 17 C5 G B1286 -91.331 -17.091 80.590 1.00 86.91 C
ATOM 18 C6 G B1286 -91.086 -16.437 79.344 1.00 86.56 C
ATOM 19 O6 G B1286 -90.011 -16.298 78.729 1.00 85.86 O
ATOM 20 N1 G B1286 -92.262 -15.907 78.820 1.00 87.16 N
ATOM 21 C2 G B1286 -93.509 -15.972 79.418 1.00 87.98 C
ATOM 22 N2 G B1286 -94.536 -15.373 78.775 1.00 88.49 N
ATOM 23 N3 G B1286 -93.730 -16.579 80.580 1.00 88.30 N
ATOM 24 C4 G B1286 -92.610 -17.111 81.112 1.00 87.74 C
ATOM 25 P U B1287 -93.421 -22.819 84.138 1.00 83.57 P
ATOM 26 OP1 U B1287 -93.943 -22.736 82.737 1.00 83.61 O
ATOM 27 OP2 U B1287 -93.977 -23.853 85.049 1.00 84.22 O
ATOM 28 O5' U B1287 -91.839 -22.927 84.128 1.00 82.67 O
TER
ATOM 2 P C A1288 -87.089 -23.969 85.497 1.00 93.94 P
ATOM 3 OP1 C A1288 -85.616 -24.006 85.388 1.00 93.16 O
ATOM 4 OP2 C A1288 -87.816 -25.249 85.646 1.00 94.54 O
ATOM 5 O5' C A1288 -87.522 -22.960 86.643 1.00 94.26 O
ATOM 6 C5' C A1288 -86.589 -22.052 87.214 1.00 93.77 C
ATOM 7 C4' C A1288 -86.558 -22.181 88.712 1.00 94.11 C
ATOM 8 O4' C A1288 -87.922 -22.161 89.193 1.00 94.94 O
ATOM 9 C3' C A1288 -85.944 -23.479 89.234 1.00 94.13 C
ATOM 10 O3' C A1288 -85.372 -23.264 90.529 1.00 94.13 O
ATOM 11 C2' C A1288 -87.154 -24.394 89.360 1.00 94.93 C
ATOM 12 O2' C A1288 -87.001 -25.436 90.302 1.00 95.27 O
ATOM 13 C1' C A1288 -88.263 -23.413 89.766 1.00 95.46 C
ATOM 14 N1 C A1288 -89.596 -23.786 89.252 1.00 96.11 N
ATOM 15 C2 C A1288 -90.307 -24.843 89.812 1.00 96.81 C
ATOM 16 O2 C A1288 -89.795 -25.447 90.771 1.00 96.88 O
ATOM 17 N3 C A1288 -91.521 -25.169 89.277 1.00 97.41 N
ATOM 18 C4 C A1288 -92.011 -24.475 88.239 1.00 97.32 C
ATOM 19 N4 C A1288 -93.193 -24.803 87.730 1.00 97.93 N
ATOM 20 C5 C A1288 -91.307 -23.397 87.651 1.00 96.62 C
ATOM 21 C6 C A1288 -90.117 -23.097 88.189 1.00 96.04 C
ATOM 22 P U A1289 -83.776 -23.272 90.735 1.00115.76 P
ATOM 23 OP1 U A1289 -83.335 -21.850 90.759 1.00115.31 O
ATOM 24 OP2 U A1289 -83.202 -24.183 89.709 1.00115.37 O
ATOM 25 O5' U A1289 -83.614 -23.911 92.187 1.00116.18 O
TER
ATOM 1 O3' U B1285 -89.649 -17.391 86.908 1.00 87.94 O
ATOM 2 P G B1286 -89.396 -18.888 86.411 1.00 86.97 P
ATOM 3 OP1 G B1286 -89.289 -19.737 87.619 1.00 87.26 O
ATOM 4 OP2 G B1286 -88.260 -18.843 85.464 1.00 86.15 O
ATOM 5 O5' G B1286 -90.742 -19.237 85.640 1.00 87.61 O
ATOM 6 C5' G B1286 -91.995 -19.146 86.304 1.00 88.45 C
ATOM 7 C4' G B1286 -93.143 -19.110 85.334 1.00 88.93 C
ATOM 8 O4' G B1286 -93.109 -17.890 84.556 1.00 88.65 O
ATOM 9 C3' G B1286 -93.171 -20.214 84.302 1.00 88.87 C
ATOM 10 O3' G B1286 -93.698 -21.407 84.834 1.00 89.42 O
ATOM 11 C2' G B1286 -94.022 -19.603 83.190 1.00 89.12 C
ATOM 12 O2' G B1286 -95.412 -19.700 83.505 1.00 90.03 O
ATOM 13 C1' G B1286 -93.600 -18.128 83.259 1.00 88.74 C
ATOM 14 N9 G B1286 -92.524 -17.803 82.298 1.00 87.92 N
ATOM 15 C8 G B1286 -91.204 -18.156 82.420 1.00 87.20 C
ATOM 16 N7 G B1286 -90.455 -17.759 81.434 1.00 86.58 N
ATOM 17 C5 G B1286 -91.331 -17.091 80.590 1.00 86.91 C
ATOM 18 C6 G B1286 -91.086 -16.437 79.344 1.00 86.56 C
ATOM 19 O6 G B1286 -90.011 -16.298 78.729 1.00 85.86 O
ATOM 20 N1 G B1286 -92.262 -15.907 78.820 1.00 87.16 N
ATOM 21 C2 G B1286 -93.509 -15.972 79.418 1.00 87.98 C
ATOM 22 N2 G B1286 -94.536 -15.373 78.775 1.00 88.49 N
ATOM 23 N3 G B1286 -93.730 -16.579 80.580 1.00 88.30 N
ATOM 24 C4 G B1286 -92.610 -17.111 81.112 1.00 87.74 C
ATOM 25 P U B1287 -93.421 -22.819 84.138 1.00 83.57 P
ATOM 26 OP1 U B1287 -93.943 -22.736 82.737 1.00 83.61 O
ATOM 27 OP2 U B1287 -93.977 -23.853 85.049 1.00 84.22 O
ATOM 28 O5' U B1287 -91.839 -22.927 84.128 1.00 82.67 O
TER
Atoms:
C2: (-90.307,-24.843,89.812)
OP1: (-85.616,-24.006,85.388)
OP2: (-87.816,-25.249,85.646)
C4: (-92.011,-24.475,88.239)
O5': (-87.522,-22.960,86.643)
C3': (-85.944,-23.479,89.234)
C1': (-88.263,-23.413,89.766)
O4': (-87.922,-22.161,89.193)
C5': (-86.589,-22.052,87.214)
P: (-87.089,-23.969,85.497)
O2: (-89.795,-25.447,90.771)
C4': (-86.558,-22.181,88.712)
C2': (-87.154,-24.394,89.360)
O2': (-87.001,-25.436,90.302)
N1: (-89.596,-23.786,89.252)
N3: (-91.521,-25.169,89.277)
N4: (-93.193,-24.803,87.730)
C6: (-90.117,-23.097,88.189)
C5: (-91.307,-23.397,87.651)
O3': (-85.372,-23.264,90.529)
OP1: (-85.616,-24.006,85.388)
OP2: (-87.816,-25.249,85.646)
C4: (-92.011,-24.475,88.239)
O5': (-87.522,-22.960,86.643)
C3': (-85.944,-23.479,89.234)
C1': (-88.263,-23.413,89.766)
O4': (-87.922,-22.161,89.193)
C5': (-86.589,-22.052,87.214)
P: (-87.089,-23.969,85.497)
O2: (-89.795,-25.447,90.771)
C4': (-86.558,-22.181,88.712)
C2': (-87.154,-24.394,89.360)
O2': (-87.001,-25.436,90.302)
N1: (-89.596,-23.786,89.252)
N3: (-91.521,-25.169,89.277)
N4: (-93.193,-24.803,87.730)
C6: (-90.117,-23.097,88.189)
C5: (-91.307,-23.397,87.651)
O3': (-85.372,-23.264,90.529)
OP1: (-89.289,-19.737,87.619)
OP2: (-88.260,-18.843,85.464)
C3': (-93.171,-20.214,84.302)
C1': (-93.600,-18.128,83.259)
C5': (-91.995,-19.146,86.304)
O6: (-90.011,-16.298,78.729)
O4': (-93.109,-17.890,84.556)
C8: (-91.204,-18.156,82.420)
C2: (-93.509,-15.972,79.418)
C6: (-91.086,-16.437,79.344)
C5: (-91.331,-17.091,80.590)
C4: (-92.610,-17.111,81.112)
P: (-89.396,-18.888,86.411)
C4': (-93.143,-19.110,85.334)
C2': (-94.022,-19.603,83.190)
O2': (-95.412,-19.700,83.505)
N1: (-92.262,-15.907,78.820)
N2: (-94.536,-15.373,78.775)
N3: (-93.730,-16.579,80.580)
N7: (-90.455,-17.759,81.434)
N9: (-92.524,-17.803,82.298)
O5': (-90.742,-19.237,85.640)
O3': (-93.698,-21.407,84.834)
OP2: (-88.260,-18.843,85.464)
C3': (-93.171,-20.214,84.302)
C1': (-93.600,-18.128,83.259)
C5': (-91.995,-19.146,86.304)
O6: (-90.011,-16.298,78.729)
O4': (-93.109,-17.890,84.556)
C8: (-91.204,-18.156,82.420)
C2: (-93.509,-15.972,79.418)
C6: (-91.086,-16.437,79.344)
C5: (-91.331,-17.091,80.590)
C4: (-92.610,-17.111,81.112)
P: (-89.396,-18.888,86.411)
C4': (-93.143,-19.110,85.334)
C2': (-94.022,-19.603,83.190)
O2': (-95.412,-19.700,83.505)
N1: (-92.262,-15.907,78.820)
N2: (-94.536,-15.373,78.775)
N3: (-93.730,-16.579,80.580)
N7: (-90.455,-17.759,81.434)
N9: (-92.524,-17.803,82.298)
O5': (-90.742,-19.237,85.640)
O3': (-93.698,-21.407,84.834)
Image (generated by PyMOL):