Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:190:189
Extra
PDB:
ATOM 1 O3' G A 89 35.104 -41.407 86.726 1.00 36.86 O
ATOM 2 P C A 90 35.969 -42.482 85.997 1.00 42.51 P
ATOM 3 OP1 C A 90 35.676 -42.336 84.567 1.00 42.32 O
ATOM 4 OP2 C A 90 35.688 -43.769 86.641 1.00 42.85 O
ATOM 5 O5' C A 90 37.456 -42.047 86.302 1.00 42.46 O
ATOM 6 C5' C A 90 38.288 -42.910 87.032 1.00 42.72 C
ATOM 7 C4' C A 90 39.647 -43.070 86.438 1.00 42.70 C
ATOM 8 O4' C A 90 40.561 -43.323 87.535 1.00 42.90 O
ATOM 9 C3' C A 90 39.795 -44.262 85.516 1.00 42.85 C
ATOM 10 O3' C A 90 40.940 -44.083 84.689 1.00 42.74 O
ATOM 11 C2' C A 90 40.079 -45.382 86.502 1.00 43.21 C
ATOM 12 O2' C A 90 40.714 -46.505 85.923 1.00 43.41 O
ATOM 13 C1' C A 90 40.992 -44.665 87.502 1.00 43.19 C
ATOM 14 N1 C A 90 40.963 -45.192 88.896 1.00 43.49 N
ATOM 15 C2 C A 90 41.873 -46.179 89.209 1.00 43.78 C
ATOM 16 O2 C A 90 42.580 -46.601 88.301 1.00 43.77 O
ATOM 17 N3 C A 90 41.960 -46.677 90.460 1.00 44.07 N
ATOM 18 C4 C A 90 41.203 -46.197 91.436 1.00 44.08 C
ATOM 19 N4 C A 90 41.398 -46.739 92.632 1.00 44.40 N
ATOM 20 C5 C A 90 40.284 -45.140 91.202 1.00 43.79 C
ATOM 21 C6 C A 90 40.218 -44.672 89.926 1.00 43.50 C
ATOM 22 P G A 91 40.766 -43.637 83.167 1.00 36.70 P
ATOM 23 OP1 G A 91 39.447 -44.175 82.697 1.00 36.75 O
ATOM 24 OP2 G A 91 41.989 -44.019 82.447 1.00 36.74 O
ATOM 25 O5' G A 91 40.650 -42.060 83.281 1.00 36.38 O
TER
ATOM 1 O3' G B 88 38.269 -40.846 91.814 1.00 34.21 O
ATOM 2 P G B 89 37.163 -41.384 90.775 1.00 37.39 P
ATOM 3 OP1 G B 89 35.954 -41.779 91.567 1.00 37.58 O
ATOM 4 OP2 G B 89 37.776 -42.374 89.899 1.00 37.46 O
ATOM 5 O5' G B 89 36.884 -40.052 90.015 1.00 37.02 O
ATOM 6 C5' G B 89 37.008 -39.951 88.670 1.00 36.82 C
ATOM 7 C4' G B 89 35.683 -39.630 88.120 1.00 36.69 C
ATOM 8 O4' G B 89 35.444 -38.192 88.124 1.00 36.43 O
ATOM 9 C3' G B 89 35.476 -40.071 86.719 1.00 36.60 C
ATOM 10 O3' G B 89 35.104 -41.407 86.726 1.00 36.86 O
ATOM 11 C2' G B 89 34.383 -39.145 86.253 1.00 36.39 C
ATOM 12 O2' G B 89 33.162 -39.602 86.762 1.00 36.54 O
ATOM 13 C1' G B 89 34.745 -37.844 86.983 1.00 36.24 C
ATOM 14 N9 G B 89 35.599 -36.994 86.149 1.00 35.99 N
ATOM 15 C8 G B 89 36.538 -37.443 85.251 1.00 35.96 C
ATOM 16 N7 G B 89 37.052 -36.470 84.573 1.00 35.72 N
ATOM 17 C5 G B 89 36.425 -35.341 85.047 1.00 35.59 C
ATOM 18 C6 G B 89 36.555 -34.021 84.668 1.00 35.34 C
ATOM 19 O6 G B 89 37.291 -33.570 83.854 1.00 35.19 O
ATOM 20 N1 G B 89 35.735 -33.155 85.338 1.00 35.29 N
ATOM 21 C2 G B 89 34.859 -33.522 86.301 1.00 35.47 C
ATOM 22 N2 G B 89 34.174 -32.522 86.825 1.00 35.39 N
ATOM 23 N3 G B 89 34.699 -34.777 86.679 1.00 35.70 N
ATOM 24 C4 G B 89 35.522 -35.625 86.017 1.00 35.75 C
ATOM 25 P C B 90 35.969 -42.482 85.997 1.00 42.51 P
ATOM 26 OP1 C B 90 35.676 -42.336 84.567 1.00 42.32 O
ATOM 27 OP2 C B 90 35.688 -43.769 86.641 1.00 42.85 O
ATOM 28 O5' C B 90 37.456 -42.047 86.302 1.00 42.46 O
TER
ATOM 2 P C A 90 35.969 -42.482 85.997 1.00 42.51 P
ATOM 3 OP1 C A 90 35.676 -42.336 84.567 1.00 42.32 O
ATOM 4 OP2 C A 90 35.688 -43.769 86.641 1.00 42.85 O
ATOM 5 O5' C A 90 37.456 -42.047 86.302 1.00 42.46 O
ATOM 6 C5' C A 90 38.288 -42.910 87.032 1.00 42.72 C
ATOM 7 C4' C A 90 39.647 -43.070 86.438 1.00 42.70 C
ATOM 8 O4' C A 90 40.561 -43.323 87.535 1.00 42.90 O
ATOM 9 C3' C A 90 39.795 -44.262 85.516 1.00 42.85 C
ATOM 10 O3' C A 90 40.940 -44.083 84.689 1.00 42.74 O
ATOM 11 C2' C A 90 40.079 -45.382 86.502 1.00 43.21 C
ATOM 12 O2' C A 90 40.714 -46.505 85.923 1.00 43.41 O
ATOM 13 C1' C A 90 40.992 -44.665 87.502 1.00 43.19 C
ATOM 14 N1 C A 90 40.963 -45.192 88.896 1.00 43.49 N
ATOM 15 C2 C A 90 41.873 -46.179 89.209 1.00 43.78 C
ATOM 16 O2 C A 90 42.580 -46.601 88.301 1.00 43.77 O
ATOM 17 N3 C A 90 41.960 -46.677 90.460 1.00 44.07 N
ATOM 18 C4 C A 90 41.203 -46.197 91.436 1.00 44.08 C
ATOM 19 N4 C A 90 41.398 -46.739 92.632 1.00 44.40 N
ATOM 20 C5 C A 90 40.284 -45.140 91.202 1.00 43.79 C
ATOM 21 C6 C A 90 40.218 -44.672 89.926 1.00 43.50 C
ATOM 22 P G A 91 40.766 -43.637 83.167 1.00 36.70 P
ATOM 23 OP1 G A 91 39.447 -44.175 82.697 1.00 36.75 O
ATOM 24 OP2 G A 91 41.989 -44.019 82.447 1.00 36.74 O
ATOM 25 O5' G A 91 40.650 -42.060 83.281 1.00 36.38 O
TER
ATOM 1 O3' G B 88 38.269 -40.846 91.814 1.00 34.21 O
ATOM 2 P G B 89 37.163 -41.384 90.775 1.00 37.39 P
ATOM 3 OP1 G B 89 35.954 -41.779 91.567 1.00 37.58 O
ATOM 4 OP2 G B 89 37.776 -42.374 89.899 1.00 37.46 O
ATOM 5 O5' G B 89 36.884 -40.052 90.015 1.00 37.02 O
ATOM 6 C5' G B 89 37.008 -39.951 88.670 1.00 36.82 C
ATOM 7 C4' G B 89 35.683 -39.630 88.120 1.00 36.69 C
ATOM 8 O4' G B 89 35.444 -38.192 88.124 1.00 36.43 O
ATOM 9 C3' G B 89 35.476 -40.071 86.719 1.00 36.60 C
ATOM 10 O3' G B 89 35.104 -41.407 86.726 1.00 36.86 O
ATOM 11 C2' G B 89 34.383 -39.145 86.253 1.00 36.39 C
ATOM 12 O2' G B 89 33.162 -39.602 86.762 1.00 36.54 O
ATOM 13 C1' G B 89 34.745 -37.844 86.983 1.00 36.24 C
ATOM 14 N9 G B 89 35.599 -36.994 86.149 1.00 35.99 N
ATOM 15 C8 G B 89 36.538 -37.443 85.251 1.00 35.96 C
ATOM 16 N7 G B 89 37.052 -36.470 84.573 1.00 35.72 N
ATOM 17 C5 G B 89 36.425 -35.341 85.047 1.00 35.59 C
ATOM 18 C6 G B 89 36.555 -34.021 84.668 1.00 35.34 C
ATOM 19 O6 G B 89 37.291 -33.570 83.854 1.00 35.19 O
ATOM 20 N1 G B 89 35.735 -33.155 85.338 1.00 35.29 N
ATOM 21 C2 G B 89 34.859 -33.522 86.301 1.00 35.47 C
ATOM 22 N2 G B 89 34.174 -32.522 86.825 1.00 35.39 N
ATOM 23 N3 G B 89 34.699 -34.777 86.679 1.00 35.70 N
ATOM 24 C4 G B 89 35.522 -35.625 86.017 1.00 35.75 C
ATOM 25 P C B 90 35.969 -42.482 85.997 1.00 42.51 P
ATOM 26 OP1 C B 90 35.676 -42.336 84.567 1.00 42.32 O
ATOM 27 OP2 C B 90 35.688 -43.769 86.641 1.00 42.85 O
ATOM 28 O5' C B 90 37.456 -42.047 86.302 1.00 42.46 O
TER
Atoms:
C2: (41.873,-46.179,89.209)
OP1: (35.676,-42.336,84.567)
OP2: (35.688,-43.769,86.641)
C4: (41.203,-46.197,91.436)
O5': (37.456,-42.047,86.302)
C3': (39.795,-44.262,85.516)
C1': (40.992,-44.665,87.502)
O4': (40.561,-43.323,87.535)
C5': (38.288,-42.910,87.032)
P: (35.969,-42.482,85.997)
O2: (42.580,-46.601,88.301)
C4': (39.647,-43.070,86.438)
C2': (40.079,-45.382,86.502)
O2': (40.714,-46.505,85.923)
N1: (40.963,-45.192,88.896)
N3: (41.960,-46.677,90.460)
N4: (41.398,-46.739,92.632)
C6: (40.218,-44.672,89.926)
C5: (40.284,-45.140,91.202)
O3': (40.940,-44.083,84.689)
OP1: (35.676,-42.336,84.567)
OP2: (35.688,-43.769,86.641)
C4: (41.203,-46.197,91.436)
O5': (37.456,-42.047,86.302)
C3': (39.795,-44.262,85.516)
C1': (40.992,-44.665,87.502)
O4': (40.561,-43.323,87.535)
C5': (38.288,-42.910,87.032)
P: (35.969,-42.482,85.997)
O2: (42.580,-46.601,88.301)
C4': (39.647,-43.070,86.438)
C2': (40.079,-45.382,86.502)
O2': (40.714,-46.505,85.923)
N1: (40.963,-45.192,88.896)
N3: (41.960,-46.677,90.460)
N4: (41.398,-46.739,92.632)
C6: (40.218,-44.672,89.926)
C5: (40.284,-45.140,91.202)
O3': (40.940,-44.083,84.689)
OP1: (35.954,-41.779,91.567)
OP2: (37.776,-42.374,89.899)
C3': (35.476,-40.071,86.719)
C1': (34.745,-37.844,86.983)
C5': (37.008,-39.951,88.670)
O6: (37.291,-33.570,83.854)
O4': (35.444,-38.192,88.124)
C8: (36.538,-37.443,85.251)
C2: (34.859,-33.522,86.301)
C6: (36.555,-34.021,84.668)
C5: (36.425,-35.341,85.047)
C4: (35.522,-35.625,86.017)
P: (37.163,-41.384,90.775)
C4': (35.683,-39.630,88.120)
C2': (34.383,-39.145,86.253)
O2': (33.162,-39.602,86.762)
N1: (35.735,-33.155,85.338)
N2: (34.174,-32.522,86.825)
N3: (34.699,-34.777,86.679)
N7: (37.052,-36.470,84.573)
N9: (35.599,-36.994,86.149)
O5': (36.884,-40.052,90.015)
O3': (35.104,-41.407,86.726)
OP2: (37.776,-42.374,89.899)
C3': (35.476,-40.071,86.719)
C1': (34.745,-37.844,86.983)
C5': (37.008,-39.951,88.670)
O6: (37.291,-33.570,83.854)
O4': (35.444,-38.192,88.124)
C8: (36.538,-37.443,85.251)
C2: (34.859,-33.522,86.301)
C6: (36.555,-34.021,84.668)
C5: (36.425,-35.341,85.047)
C4: (35.522,-35.625,86.017)
P: (37.163,-41.384,90.775)
C4': (35.683,-39.630,88.120)
C2': (34.383,-39.145,86.253)
O2': (33.162,-39.602,86.762)
N1: (35.735,-33.155,85.338)
N2: (34.174,-32.522,86.825)
N3: (34.699,-34.777,86.679)
N7: (37.052,-36.470,84.573)
N9: (35.599,-36.994,86.149)
O5': (36.884,-40.052,90.015)
O3': (35.104,-41.407,86.726)
Image (generated by PyMOL):