Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X57:X90
Extra
PDB:
ATOM 1 O3' A A 56 46.953 17.601 21.876 1.00 27.62 O
ATOM 2 P A A 57 46.352 16.220 22.402 1.00 27.88 P
ATOM 3 OP1 A A 57 47.277 15.880 23.514 1.00 32.31 O
ATOM 4 OP2 A A 57 46.158 15.285 21.269 1.00 28.88 O
ATOM 5 O5' A A 57 44.919 16.540 23.023 1.00 24.95 O
ATOM 6 C5' A A 57 44.799 17.396 24.149 1.00 25.69 C
ATOM 7 C4' A A 57 43.357 17.792 24.332 1.00 26.23 C
ATOM 8 O4' A A 57 42.923 18.560 23.176 1.00 26.55 O
ATOM 9 C3' A A 57 42.388 16.625 24.384 1.00 25.98 C
ATOM 10 O3' A A 57 42.318 16.032 25.679 1.00 22.11 O
ATOM 11 C2' A A 57 41.083 17.265 23.911 1.00 23.90 C
ATOM 12 O2' A A 57 40.527 18.062 24.944 1.00 21.72 O
ATOM 13 C1' A A 57 41.594 18.214 22.829 1.00 25.15 C
ATOM 14 N9 A A 57 41.598 17.590 21.489 1.00 23.35 N
ATOM 15 C8 A A 57 42.551 16.759 20.961 1.00 24.76 C
ATOM 16 N7 A A 57 42.282 16.346 19.741 1.00 25.01 N
ATOM 17 C5 A A 57 41.073 16.965 19.451 1.00 23.22 C
ATOM 18 C6 A A 57 40.276 16.935 18.304 1.00 20.35 C
ATOM 19 N6 A A 57 40.623 16.220 17.238 1.00 18.69 N
ATOM 20 N1 A A 57 39.118 17.642 18.310 1.00 20.53 N
ATOM 21 C2 A A 57 38.804 18.340 19.409 1.00 19.63 C
ATOM 22 N3 A A 57 39.500 18.459 20.544 1.00 22.84 N
ATOM 23 C4 A A 57 40.635 17.732 20.507 1.00 20.83 C
ATOM 24 P G A 58 41.980 14.478 25.860 1.00 27.80 P
ATOM 25 OP1 G A 58 42.300 14.226 27.291 1.00 28.17 O
ATOM 26 OP2 G A 58 42.637 13.632 24.831 1.00 25.53 O
ATOM 27 O5' G A 58 40.399 14.488 25.680 1.00 26.07 O
TER
ATOM 1 O3' U B 89 34.715 19.337 6.099 1.00 23.76 O
ATOM 2 P A B 90 34.097 17.968 6.646 1.00 23.85 P
ATOM 3 OP1 A B 90 33.839 17.179 5.418 1.00 22.71 O
ATOM 4 OP2 A B 90 32.975 18.242 7.588 1.00 21.62 O
ATOM 5 O5' A B 90 35.325 17.343 7.436 1.00 21.72 O
ATOM 6 C5' A B 90 36.492 16.959 6.717 1.00 21.52 C
ATOM 7 C4' A B 90 37.409 16.097 7.545 1.00 24.73 C
ATOM 8 O4' A B 90 38.160 16.873 8.511 1.00 23.27 O
ATOM 9 C3' A B 90 36.756 15.032 8.401 1.00 23.55 C
ATOM 10 O3' A B 90 36.307 13.937 7.635 1.00 24.94 O
ATOM 11 C2' A B 90 37.883 14.670 9.356 1.00 23.66 C
ATOM 12 O2' A B 90 38.862 13.890 8.680 1.00 22.20 O
ATOM 13 C1' A B 90 38.499 16.040 9.600 1.00 20.53 C
ATOM 14 N9 A B 90 38.132 16.719 10.861 1.00 22.42 N
ATOM 15 C8 A B 90 37.385 17.861 11.023 1.00 20.61 C
ATOM 16 N7 A B 90 37.297 18.254 12.278 1.00 21.97 N
ATOM 17 C5 A B 90 38.041 17.320 12.986 1.00 20.65 C
ATOM 18 C6 A B 90 38.347 17.171 14.349 1.00 19.58 C
ATOM 19 N6 A B 90 37.914 17.994 15.308 1.00 18.42 N
ATOM 20 N1 A B 90 39.124 16.117 14.700 1.00 21.13 N
ATOM 21 C2 A B 90 39.563 15.281 13.752 1.00 21.96 C
ATOM 22 N3 A B 90 39.343 15.326 12.441 1.00 19.80 N
ATOM 23 C4 A B 90 38.572 16.374 12.121 1.00 20.38 C
ATOM 24 P A B 91 35.049 13.114 8.188 1.00 25.65 P
ATOM 25 OP1 A B 91 34.863 12.072 7.158 1.00 24.30 O
ATOM 26 OP2 A B 91 33.951 14.037 8.541 1.00 26.04 O
ATOM 27 O5' A B 91 35.625 12.484 9.532 1.00 22.01 O
TER
ATOM 2 P A A 57 46.352 16.220 22.402 1.00 27.88 P
ATOM 3 OP1 A A 57 47.277 15.880 23.514 1.00 32.31 O
ATOM 4 OP2 A A 57 46.158 15.285 21.269 1.00 28.88 O
ATOM 5 O5' A A 57 44.919 16.540 23.023 1.00 24.95 O
ATOM 6 C5' A A 57 44.799 17.396 24.149 1.00 25.69 C
ATOM 7 C4' A A 57 43.357 17.792 24.332 1.00 26.23 C
ATOM 8 O4' A A 57 42.923 18.560 23.176 1.00 26.55 O
ATOM 9 C3' A A 57 42.388 16.625 24.384 1.00 25.98 C
ATOM 10 O3' A A 57 42.318 16.032 25.679 1.00 22.11 O
ATOM 11 C2' A A 57 41.083 17.265 23.911 1.00 23.90 C
ATOM 12 O2' A A 57 40.527 18.062 24.944 1.00 21.72 O
ATOM 13 C1' A A 57 41.594 18.214 22.829 1.00 25.15 C
ATOM 14 N9 A A 57 41.598 17.590 21.489 1.00 23.35 N
ATOM 15 C8 A A 57 42.551 16.759 20.961 1.00 24.76 C
ATOM 16 N7 A A 57 42.282 16.346 19.741 1.00 25.01 N
ATOM 17 C5 A A 57 41.073 16.965 19.451 1.00 23.22 C
ATOM 18 C6 A A 57 40.276 16.935 18.304 1.00 20.35 C
ATOM 19 N6 A A 57 40.623 16.220 17.238 1.00 18.69 N
ATOM 20 N1 A A 57 39.118 17.642 18.310 1.00 20.53 N
ATOM 21 C2 A A 57 38.804 18.340 19.409 1.00 19.63 C
ATOM 22 N3 A A 57 39.500 18.459 20.544 1.00 22.84 N
ATOM 23 C4 A A 57 40.635 17.732 20.507 1.00 20.83 C
ATOM 24 P G A 58 41.980 14.478 25.860 1.00 27.80 P
ATOM 25 OP1 G A 58 42.300 14.226 27.291 1.00 28.17 O
ATOM 26 OP2 G A 58 42.637 13.632 24.831 1.00 25.53 O
ATOM 27 O5' G A 58 40.399 14.488 25.680 1.00 26.07 O
TER
ATOM 1 O3' U B 89 34.715 19.337 6.099 1.00 23.76 O
ATOM 2 P A B 90 34.097 17.968 6.646 1.00 23.85 P
ATOM 3 OP1 A B 90 33.839 17.179 5.418 1.00 22.71 O
ATOM 4 OP2 A B 90 32.975 18.242 7.588 1.00 21.62 O
ATOM 5 O5' A B 90 35.325 17.343 7.436 1.00 21.72 O
ATOM 6 C5' A B 90 36.492 16.959 6.717 1.00 21.52 C
ATOM 7 C4' A B 90 37.409 16.097 7.545 1.00 24.73 C
ATOM 8 O4' A B 90 38.160 16.873 8.511 1.00 23.27 O
ATOM 9 C3' A B 90 36.756 15.032 8.401 1.00 23.55 C
ATOM 10 O3' A B 90 36.307 13.937 7.635 1.00 24.94 O
ATOM 11 C2' A B 90 37.883 14.670 9.356 1.00 23.66 C
ATOM 12 O2' A B 90 38.862 13.890 8.680 1.00 22.20 O
ATOM 13 C1' A B 90 38.499 16.040 9.600 1.00 20.53 C
ATOM 14 N9 A B 90 38.132 16.719 10.861 1.00 22.42 N
ATOM 15 C8 A B 90 37.385 17.861 11.023 1.00 20.61 C
ATOM 16 N7 A B 90 37.297 18.254 12.278 1.00 21.97 N
ATOM 17 C5 A B 90 38.041 17.320 12.986 1.00 20.65 C
ATOM 18 C6 A B 90 38.347 17.171 14.349 1.00 19.58 C
ATOM 19 N6 A B 90 37.914 17.994 15.308 1.00 18.42 N
ATOM 20 N1 A B 90 39.124 16.117 14.700 1.00 21.13 N
ATOM 21 C2 A B 90 39.563 15.281 13.752 1.00 21.96 C
ATOM 22 N3 A B 90 39.343 15.326 12.441 1.00 19.80 N
ATOM 23 C4 A B 90 38.572 16.374 12.121 1.00 20.38 C
ATOM 24 P A B 91 35.049 13.114 8.188 1.00 25.65 P
ATOM 25 OP1 A B 91 34.863 12.072 7.158 1.00 24.30 O
ATOM 26 OP2 A B 91 33.951 14.037 8.541 1.00 26.04 O
ATOM 27 O5' A B 91 35.625 12.484 9.532 1.00 22.01 O
TER
Atoms:
OP1: (47.277,15.880,23.514)
OP2: (46.158,15.285,21.269)
C3': (42.388,16.625,24.384)
C1': (41.594,18.214,22.829)
C5': (44.799,17.396,24.149)
O4': (42.923,18.560,23.176)
C8: (42.551,16.759,20.961)
O2': (40.527,18.062,24.944)
C6: (40.276,16.935,18.304)
C5: (41.073,16.965,19.451)
C4: (40.635,17.732,20.507)
P: (46.352,16.220,22.402)
C4': (43.357,17.792,24.332)
C2': (41.083,17.265,23.911)
C2: (38.804,18.340,19.409)
N1: (39.118,17.642,18.310)
N3: (39.500,18.459,20.544)
N6: (40.623,16.220,17.238)
N7: (42.282,16.346,19.741)
N9: (41.598,17.590,21.489)
O5': (44.919,16.540,23.023)
O3': (42.318,16.032,25.679)
OP2: (46.158,15.285,21.269)
C3': (42.388,16.625,24.384)
C1': (41.594,18.214,22.829)
C5': (44.799,17.396,24.149)
O4': (42.923,18.560,23.176)
C8: (42.551,16.759,20.961)
O2': (40.527,18.062,24.944)
C6: (40.276,16.935,18.304)
C5: (41.073,16.965,19.451)
C4: (40.635,17.732,20.507)
P: (46.352,16.220,22.402)
C4': (43.357,17.792,24.332)
C2': (41.083,17.265,23.911)
C2: (38.804,18.340,19.409)
N1: (39.118,17.642,18.310)
N3: (39.500,18.459,20.544)
N6: (40.623,16.220,17.238)
N7: (42.282,16.346,19.741)
N9: (41.598,17.590,21.489)
O5': (44.919,16.540,23.023)
O3': (42.318,16.032,25.679)
OP1: (33.839,17.179,5.418)
OP2: (32.975,18.242,7.588)
C3': (36.756,15.032,8.401)
C1': (38.499,16.040,9.600)
C5': (36.492,16.959,6.717)
O4': (38.160,16.873,8.511)
C8: (37.385,17.861,11.023)
O2': (38.862,13.890,8.680)
C6: (38.347,17.171,14.349)
C5: (38.041,17.320,12.986)
C4: (38.572,16.374,12.121)
P: (34.097,17.968,6.646)
C4': (37.409,16.097,7.545)
C2': (37.883,14.670,9.356)
C2: (39.563,15.281,13.752)
N1: (39.124,16.117,14.700)
N3: (39.343,15.326,12.441)
N6: (37.914,17.994,15.308)
N7: (37.297,18.254,12.278)
N9: (38.132,16.719,10.861)
O5': (35.325,17.343,7.436)
O3': (36.307,13.937,7.635)
OP2: (32.975,18.242,7.588)
C3': (36.756,15.032,8.401)
C1': (38.499,16.040,9.600)
C5': (36.492,16.959,6.717)
O4': (38.160,16.873,8.511)
C8: (37.385,17.861,11.023)
O2': (38.862,13.890,8.680)
C6: (38.347,17.171,14.349)
C5: (38.041,17.320,12.986)
C4: (38.572,16.374,12.121)
P: (34.097,17.968,6.646)
C4': (37.409,16.097,7.545)
C2': (37.883,14.670,9.356)
C2: (39.563,15.281,13.752)
N1: (39.124,16.117,14.700)
N3: (39.343,15.326,12.441)
N6: (37.914,17.994,15.308)
N7: (37.297,18.254,12.278)
N9: (38.132,16.719,10.861)
O5': (35.325,17.343,7.436)
O3': (36.307,13.937,7.635)
Image (generated by PyMOL):