Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01390:01683
Extra
PDB:
ATOM 1 O3' G A1389 57.549 164.110 78.651 1.00 40.10 O
ATOM 2 P C A1390 58.598 163.449 79.669 1.00 40.45 P
ATOM 3 OP1 C A1390 59.159 164.569 80.478 1.00 37.56 O
ATOM 4 OP2 C A1390 59.504 162.575 78.879 1.00 36.33 O
ATOM 5 O5' C A1390 57.700 162.549 80.627 1.00 37.42 O
ATOM 6 C5' C A1390 57.005 163.138 81.725 1.00 36.15 C
ATOM 7 C4' C A1390 55.914 162.225 82.206 1.00 35.93 C
ATOM 8 O4' C A1390 56.481 160.976 82.703 1.00 35.46 O
ATOM 9 C3' C A1390 55.087 162.798 83.350 1.00 36.07 C
ATOM 10 O3' C A1390 53.756 162.343 83.203 1.00 38.44 O
ATOM 11 C2' C A1390 55.707 162.140 84.573 1.00 35.27 C
ATOM 12 O2' C A1390 54.818 162.041 85.663 1.00 37.52 O
ATOM 13 C1' C A1390 56.031 160.755 84.025 1.00 35.34 C
ATOM 14 N1 C A1390 57.072 160.038 84.783 1.00 36.22 N
ATOM 15 C2 C A1390 56.768 158.779 85.330 1.00 35.28 C
ATOM 16 O2 C A1390 55.644 158.294 85.148 1.00 35.19 O
ATOM 17 N3 C A1390 57.710 158.126 86.042 1.00 34.72 N
ATOM 18 C4 C A1390 58.912 158.672 86.217 1.00 34.20 C
ATOM 19 N4 C A1390 59.807 157.989 86.926 1.00 34.88 N
ATOM 20 C5 C A1390 59.251 159.944 85.672 1.00 35.14 C
ATOM 21 C6 C A1390 58.313 160.585 84.967 1.00 35.38 C
ATOM 22 P U A1391 52.715 163.199 82.340 1.00 39.00 P
ATOM 23 OP1 U A1391 51.861 162.202 81.644 1.00 40.94 O
ATOM 24 OP2 U A1391 53.457 164.212 81.540 1.00 37.14 O
ATOM 25 O5' U A1391 51.842 163.946 83.442 1.00 34.01 O
TER
ATOM 1 O3' U B1682 60.046 165.373 86.612 1.00 33.77 O
ATOM 2 P C B1683 58.865 164.335 86.301 1.00 32.82 P
ATOM 3 OP1 C B1683 59.037 163.198 87.236 1.00 36.66 O
ATOM 4 OP2 C B1683 58.819 164.090 84.844 1.00 33.54 O
ATOM 5 O5' C B1683 57.548 165.115 86.723 1.00 32.48 O
ATOM 6 C5' C B1683 57.405 165.621 88.056 1.00 33.78 C
ATOM 7 C4' C B1683 56.287 166.622 88.106 1.00 34.79 C
ATOM 8 O4' C B1683 55.020 165.930 87.951 1.00 35.71 O
ATOM 9 C3' C B1683 56.116 167.362 89.418 1.00 35.02 C
ATOM 10 O3' C B1683 57.062 168.421 89.539 1.00 37.69 O
ATOM 11 C2' C B1683 54.680 167.846 89.294 1.00 34.76 C
ATOM 12 O2' C B1683 54.552 168.900 88.359 1.00 36.32 O
ATOM 13 C1' C B1683 54.019 166.609 88.688 1.00 34.17 C
ATOM 14 N1 C B1683 53.488 165.702 89.719 1.00 32.19 N
ATOM 15 C2 C B1683 52.192 165.915 90.182 1.00 32.96 C
ATOM 16 O2 C B1683 51.529 166.842 89.695 1.00 34.90 O
ATOM 17 N3 C B1683 51.691 165.109 91.144 1.00 30.58 N
ATOM 18 C4 C B1683 52.434 164.117 91.631 1.00 31.27 C
ATOM 19 N4 C B1683 51.897 163.338 92.572 1.00 32.54 N
ATOM 20 C5 C B1683 53.760 163.874 91.176 1.00 29.94 C
ATOM 21 C6 C B1683 54.242 164.681 90.225 1.00 31.23 C
ATOM 22 P G B1684 57.318 169.102 90.974 1.00 37.65 P
ATOM 23 OP1 G B1684 58.480 169.999 90.803 1.00 39.59 O
ATOM 24 OP2 G B1684 57.350 168.061 92.036 1.00 37.30 O
ATOM 25 O5' G B1684 56.014 169.985 91.187 1.00 37.49 O
TER
ATOM 2 P C A1390 58.598 163.449 79.669 1.00 40.45 P
ATOM 3 OP1 C A1390 59.159 164.569 80.478 1.00 37.56 O
ATOM 4 OP2 C A1390 59.504 162.575 78.879 1.00 36.33 O
ATOM 5 O5' C A1390 57.700 162.549 80.627 1.00 37.42 O
ATOM 6 C5' C A1390 57.005 163.138 81.725 1.00 36.15 C
ATOM 7 C4' C A1390 55.914 162.225 82.206 1.00 35.93 C
ATOM 8 O4' C A1390 56.481 160.976 82.703 1.00 35.46 O
ATOM 9 C3' C A1390 55.087 162.798 83.350 1.00 36.07 C
ATOM 10 O3' C A1390 53.756 162.343 83.203 1.00 38.44 O
ATOM 11 C2' C A1390 55.707 162.140 84.573 1.00 35.27 C
ATOM 12 O2' C A1390 54.818 162.041 85.663 1.00 37.52 O
ATOM 13 C1' C A1390 56.031 160.755 84.025 1.00 35.34 C
ATOM 14 N1 C A1390 57.072 160.038 84.783 1.00 36.22 N
ATOM 15 C2 C A1390 56.768 158.779 85.330 1.00 35.28 C
ATOM 16 O2 C A1390 55.644 158.294 85.148 1.00 35.19 O
ATOM 17 N3 C A1390 57.710 158.126 86.042 1.00 34.72 N
ATOM 18 C4 C A1390 58.912 158.672 86.217 1.00 34.20 C
ATOM 19 N4 C A1390 59.807 157.989 86.926 1.00 34.88 N
ATOM 20 C5 C A1390 59.251 159.944 85.672 1.00 35.14 C
ATOM 21 C6 C A1390 58.313 160.585 84.967 1.00 35.38 C
ATOM 22 P U A1391 52.715 163.199 82.340 1.00 39.00 P
ATOM 23 OP1 U A1391 51.861 162.202 81.644 1.00 40.94 O
ATOM 24 OP2 U A1391 53.457 164.212 81.540 1.00 37.14 O
ATOM 25 O5' U A1391 51.842 163.946 83.442 1.00 34.01 O
TER
ATOM 1 O3' U B1682 60.046 165.373 86.612 1.00 33.77 O
ATOM 2 P C B1683 58.865 164.335 86.301 1.00 32.82 P
ATOM 3 OP1 C B1683 59.037 163.198 87.236 1.00 36.66 O
ATOM 4 OP2 C B1683 58.819 164.090 84.844 1.00 33.54 O
ATOM 5 O5' C B1683 57.548 165.115 86.723 1.00 32.48 O
ATOM 6 C5' C B1683 57.405 165.621 88.056 1.00 33.78 C
ATOM 7 C4' C B1683 56.287 166.622 88.106 1.00 34.79 C
ATOM 8 O4' C B1683 55.020 165.930 87.951 1.00 35.71 O
ATOM 9 C3' C B1683 56.116 167.362 89.418 1.00 35.02 C
ATOM 10 O3' C B1683 57.062 168.421 89.539 1.00 37.69 O
ATOM 11 C2' C B1683 54.680 167.846 89.294 1.00 34.76 C
ATOM 12 O2' C B1683 54.552 168.900 88.359 1.00 36.32 O
ATOM 13 C1' C B1683 54.019 166.609 88.688 1.00 34.17 C
ATOM 14 N1 C B1683 53.488 165.702 89.719 1.00 32.19 N
ATOM 15 C2 C B1683 52.192 165.915 90.182 1.00 32.96 C
ATOM 16 O2 C B1683 51.529 166.842 89.695 1.00 34.90 O
ATOM 17 N3 C B1683 51.691 165.109 91.144 1.00 30.58 N
ATOM 18 C4 C B1683 52.434 164.117 91.631 1.00 31.27 C
ATOM 19 N4 C B1683 51.897 163.338 92.572 1.00 32.54 N
ATOM 20 C5 C B1683 53.760 163.874 91.176 1.00 29.94 C
ATOM 21 C6 C B1683 54.242 164.681 90.225 1.00 31.23 C
ATOM 22 P G B1684 57.318 169.102 90.974 1.00 37.65 P
ATOM 23 OP1 G B1684 58.480 169.999 90.803 1.00 39.59 O
ATOM 24 OP2 G B1684 57.350 168.061 92.036 1.00 37.30 O
ATOM 25 O5' G B1684 56.014 169.985 91.187 1.00 37.49 O
TER
Atoms:
C2: (56.768,158.779,85.330)
OP1: (59.159,164.569,80.478)
OP2: (59.504,162.575,78.879)
C4: (58.912,158.672,86.217)
O5': (57.700,162.549,80.627)
C3': (55.087,162.798,83.350)
C1': (56.031,160.755,84.025)
O4': (56.481,160.976,82.703)
C5': (57.005,163.138,81.725)
P: (58.598,163.449,79.669)
O2: (55.644,158.294,85.148)
C4': (55.914,162.225,82.206)
C2': (55.707,162.140,84.573)
O2': (54.818,162.041,85.663)
N1: (57.072,160.038,84.783)
N3: (57.710,158.126,86.042)
N4: (59.807,157.989,86.926)
C6: (58.313,160.585,84.967)
C5: (59.251,159.944,85.672)
O3': (53.756,162.343,83.203)
OP1: (59.159,164.569,80.478)
OP2: (59.504,162.575,78.879)
C4: (58.912,158.672,86.217)
O5': (57.700,162.549,80.627)
C3': (55.087,162.798,83.350)
C1': (56.031,160.755,84.025)
O4': (56.481,160.976,82.703)
C5': (57.005,163.138,81.725)
P: (58.598,163.449,79.669)
O2: (55.644,158.294,85.148)
C4': (55.914,162.225,82.206)
C2': (55.707,162.140,84.573)
O2': (54.818,162.041,85.663)
N1: (57.072,160.038,84.783)
N3: (57.710,158.126,86.042)
N4: (59.807,157.989,86.926)
C6: (58.313,160.585,84.967)
C5: (59.251,159.944,85.672)
O3': (53.756,162.343,83.203)
C2: (52.192,165.915,90.182)
OP1: (59.037,163.198,87.236)
OP2: (58.819,164.090,84.844)
C4: (52.434,164.117,91.631)
O5': (57.548,165.115,86.723)
C3': (56.116,167.362,89.418)
C1': (54.019,166.609,88.688)
O4': (55.020,165.930,87.951)
C5': (57.405,165.621,88.056)
P: (58.865,164.335,86.301)
O2: (51.529,166.842,89.695)
C4': (56.287,166.622,88.106)
C2': (54.680,167.846,89.294)
O2': (54.552,168.900,88.359)
N1: (53.488,165.702,89.719)
N3: (51.691,165.109,91.144)
N4: (51.897,163.338,92.572)
C6: (54.242,164.681,90.225)
C5: (53.760,163.874,91.176)
O3': (57.062,168.421,89.539)
OP1: (59.037,163.198,87.236)
OP2: (58.819,164.090,84.844)
C4: (52.434,164.117,91.631)
O5': (57.548,165.115,86.723)
C3': (56.116,167.362,89.418)
C1': (54.019,166.609,88.688)
O4': (55.020,165.930,87.951)
C5': (57.405,165.621,88.056)
P: (58.865,164.335,86.301)
O2: (51.529,166.842,89.695)
C4': (56.287,166.622,88.106)
C2': (54.680,167.846,89.294)
O2': (54.552,168.900,88.359)
N1: (53.488,165.702,89.719)
N3: (51.691,165.109,91.144)
N4: (51.897,163.338,92.572)
C6: (54.242,164.681,90.225)
C5: (53.760,163.874,91.176)
O3': (57.062,168.421,89.539)
Image (generated by PyMOL):