Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01390:01683
Extra
PDB:
ATOM 1 O3' G A1389 57.723 164.310 78.905 1.00 48.60 O
ATOM 2 P C A1390 58.714 163.525 79.888 1.00 47.71 P
ATOM 3 OP1 C A1390 59.376 164.571 80.716 1.00 45.58 O
ATOM 4 OP2 C A1390 59.538 162.617 79.056 1.00 45.38 O
ATOM 5 O5' C A1390 57.740 162.658 80.807 1.00 45.38 O
ATOM 6 C5' C A1390 57.016 163.276 81.882 1.00 44.61 C
ATOM 7 C4' C A1390 55.931 162.366 82.397 1.00 44.07 C
ATOM 8 O4' C A1390 56.499 161.128 82.913 1.00 44.86 O
ATOM 9 C3' C A1390 55.122 162.957 83.543 1.00 45.06 C
ATOM 10 O3' C A1390 53.787 162.492 83.432 1.00 47.50 O
ATOM 11 C2' C A1390 55.780 162.337 84.768 1.00 45.07 C
ATOM 12 O2' C A1390 54.951 162.269 85.908 1.00 47.26 O
ATOM 13 C1' C A1390 56.082 160.937 84.251 1.00 44.71 C
ATOM 14 N1 C A1390 57.152 160.253 85.000 1.00 46.53 N
ATOM 15 C2 C A1390 56.911 158.979 85.518 1.00 45.77 C
ATOM 16 O2 C A1390 55.813 158.456 85.343 1.00 46.53 O
ATOM 17 N3 C A1390 57.883 158.350 86.202 1.00 47.18 N
ATOM 18 C4 C A1390 59.061 158.946 86.388 1.00 50.15 C
ATOM 19 N4 C A1390 60.004 158.285 87.081 1.00 50.85 N
ATOM 20 C5 C A1390 59.334 160.244 85.877 1.00 50.48 C
ATOM 21 C6 C A1390 58.362 160.855 85.193 1.00 48.56 C
ATOM 22 P U A1391 52.712 163.352 82.608 1.00 47.14 P
ATOM 23 OP1 U A1391 51.795 162.362 81.979 1.00 45.74 O
ATOM 24 OP2 U A1391 53.435 164.329 81.751 1.00 45.24 O
ATOM 25 O5' U A1391 51.930 164.150 83.741 1.00 45.73 O
TER
ATOM 1 O3' U B1682 60.162 165.553 86.852 1.00 44.24 O
ATOM 2 P C B1683 59.000 164.519 86.498 1.00 43.72 P
ATOM 3 OP1 C B1683 59.173 163.353 87.390 1.00 46.29 O
ATOM 4 OP2 C B1683 58.996 164.334 85.033 1.00 43.56 O
ATOM 5 O5' C B1683 57.666 165.264 86.922 1.00 44.27 O
ATOM 6 C5' C B1683 57.474 165.693 88.276 1.00 44.62 C
ATOM 7 C4' C B1683 56.379 166.722 88.333 1.00 44.78 C
ATOM 8 O4' C B1683 55.094 166.062 88.187 1.00 45.14 O
ATOM 9 C3' C B1683 56.229 167.453 89.650 1.00 44.28 C
ATOM 10 O3' C B1683 57.194 168.482 89.765 1.00 46.54 O
ATOM 11 C2' C B1683 54.805 167.977 89.541 1.00 43.30 C
ATOM 12 O2' C B1683 54.680 169.058 88.639 1.00 43.65 O
ATOM 13 C1' C B1683 54.111 166.771 88.920 1.00 41.80 C
ATOM 14 N1 C B1683 53.567 165.888 89.951 1.00 38.83 N
ATOM 15 C2 C B1683 52.305 166.158 90.447 1.00 39.78 C
ATOM 16 O2 C B1683 51.670 167.099 89.971 1.00 41.08 O
ATOM 17 N3 C B1683 51.804 165.396 91.431 1.00 39.50 N
ATOM 18 C4 C B1683 52.519 164.390 91.917 1.00 39.76 C
ATOM 19 N4 C B1683 51.995 163.683 92.906 1.00 43.80 N
ATOM 20 C5 C B1683 53.806 164.070 91.413 1.00 40.54 C
ATOM 21 C6 C B1683 54.287 164.837 90.435 1.00 39.26 C
ATOM 22 P G B1684 57.417 169.197 91.180 1.00 47.17 P
ATOM 23 OP1 G B1684 58.532 170.164 91.007 1.00 47.54 O
ATOM 24 OP2 G B1684 57.519 168.138 92.222 1.00 46.44 O
ATOM 25 O5' G B1684 56.062 170.010 91.367 1.00 45.56 O
TER
ATOM 2 P C A1390 58.714 163.525 79.888 1.00 47.71 P
ATOM 3 OP1 C A1390 59.376 164.571 80.716 1.00 45.58 O
ATOM 4 OP2 C A1390 59.538 162.617 79.056 1.00 45.38 O
ATOM 5 O5' C A1390 57.740 162.658 80.807 1.00 45.38 O
ATOM 6 C5' C A1390 57.016 163.276 81.882 1.00 44.61 C
ATOM 7 C4' C A1390 55.931 162.366 82.397 1.00 44.07 C
ATOM 8 O4' C A1390 56.499 161.128 82.913 1.00 44.86 O
ATOM 9 C3' C A1390 55.122 162.957 83.543 1.00 45.06 C
ATOM 10 O3' C A1390 53.787 162.492 83.432 1.00 47.50 O
ATOM 11 C2' C A1390 55.780 162.337 84.768 1.00 45.07 C
ATOM 12 O2' C A1390 54.951 162.269 85.908 1.00 47.26 O
ATOM 13 C1' C A1390 56.082 160.937 84.251 1.00 44.71 C
ATOM 14 N1 C A1390 57.152 160.253 85.000 1.00 46.53 N
ATOM 15 C2 C A1390 56.911 158.979 85.518 1.00 45.77 C
ATOM 16 O2 C A1390 55.813 158.456 85.343 1.00 46.53 O
ATOM 17 N3 C A1390 57.883 158.350 86.202 1.00 47.18 N
ATOM 18 C4 C A1390 59.061 158.946 86.388 1.00 50.15 C
ATOM 19 N4 C A1390 60.004 158.285 87.081 1.00 50.85 N
ATOM 20 C5 C A1390 59.334 160.244 85.877 1.00 50.48 C
ATOM 21 C6 C A1390 58.362 160.855 85.193 1.00 48.56 C
ATOM 22 P U A1391 52.712 163.352 82.608 1.00 47.14 P
ATOM 23 OP1 U A1391 51.795 162.362 81.979 1.00 45.74 O
ATOM 24 OP2 U A1391 53.435 164.329 81.751 1.00 45.24 O
ATOM 25 O5' U A1391 51.930 164.150 83.741 1.00 45.73 O
TER
ATOM 1 O3' U B1682 60.162 165.553 86.852 1.00 44.24 O
ATOM 2 P C B1683 59.000 164.519 86.498 1.00 43.72 P
ATOM 3 OP1 C B1683 59.173 163.353 87.390 1.00 46.29 O
ATOM 4 OP2 C B1683 58.996 164.334 85.033 1.00 43.56 O
ATOM 5 O5' C B1683 57.666 165.264 86.922 1.00 44.27 O
ATOM 6 C5' C B1683 57.474 165.693 88.276 1.00 44.62 C
ATOM 7 C4' C B1683 56.379 166.722 88.333 1.00 44.78 C
ATOM 8 O4' C B1683 55.094 166.062 88.187 1.00 45.14 O
ATOM 9 C3' C B1683 56.229 167.453 89.650 1.00 44.28 C
ATOM 10 O3' C B1683 57.194 168.482 89.765 1.00 46.54 O
ATOM 11 C2' C B1683 54.805 167.977 89.541 1.00 43.30 C
ATOM 12 O2' C B1683 54.680 169.058 88.639 1.00 43.65 O
ATOM 13 C1' C B1683 54.111 166.771 88.920 1.00 41.80 C
ATOM 14 N1 C B1683 53.567 165.888 89.951 1.00 38.83 N
ATOM 15 C2 C B1683 52.305 166.158 90.447 1.00 39.78 C
ATOM 16 O2 C B1683 51.670 167.099 89.971 1.00 41.08 O
ATOM 17 N3 C B1683 51.804 165.396 91.431 1.00 39.50 N
ATOM 18 C4 C B1683 52.519 164.390 91.917 1.00 39.76 C
ATOM 19 N4 C B1683 51.995 163.683 92.906 1.00 43.80 N
ATOM 20 C5 C B1683 53.806 164.070 91.413 1.00 40.54 C
ATOM 21 C6 C B1683 54.287 164.837 90.435 1.00 39.26 C
ATOM 22 P G B1684 57.417 169.197 91.180 1.00 47.17 P
ATOM 23 OP1 G B1684 58.532 170.164 91.007 1.00 47.54 O
ATOM 24 OP2 G B1684 57.519 168.138 92.222 1.00 46.44 O
ATOM 25 O5' G B1684 56.062 170.010 91.367 1.00 45.56 O
TER
Atoms:
C2: (56.911,158.979,85.518)
OP1: (59.376,164.571,80.716)
OP2: (59.538,162.617,79.056)
C4: (59.061,158.946,86.388)
O5': (57.740,162.658,80.807)
C3': (55.122,162.957,83.543)
C1': (56.082,160.937,84.251)
O4': (56.499,161.128,82.913)
C5': (57.016,163.276,81.882)
P: (58.714,163.525,79.888)
O2: (55.813,158.456,85.343)
C4': (55.931,162.366,82.397)
C2': (55.780,162.337,84.768)
O2': (54.951,162.269,85.908)
N1: (57.152,160.253,85.000)
N3: (57.883,158.350,86.202)
N4: (60.004,158.285,87.081)
C6: (58.362,160.855,85.193)
C5: (59.334,160.244,85.877)
O3': (53.787,162.492,83.432)
OP1: (59.376,164.571,80.716)
OP2: (59.538,162.617,79.056)
C4: (59.061,158.946,86.388)
O5': (57.740,162.658,80.807)
C3': (55.122,162.957,83.543)
C1': (56.082,160.937,84.251)
O4': (56.499,161.128,82.913)
C5': (57.016,163.276,81.882)
P: (58.714,163.525,79.888)
O2: (55.813,158.456,85.343)
C4': (55.931,162.366,82.397)
C2': (55.780,162.337,84.768)
O2': (54.951,162.269,85.908)
N1: (57.152,160.253,85.000)
N3: (57.883,158.350,86.202)
N4: (60.004,158.285,87.081)
C6: (58.362,160.855,85.193)
C5: (59.334,160.244,85.877)
O3': (53.787,162.492,83.432)
C2: (52.305,166.158,90.447)
OP1: (59.173,163.353,87.390)
OP2: (58.996,164.334,85.033)
C4: (52.519,164.390,91.917)
O5': (57.666,165.264,86.922)
C3': (56.229,167.453,89.650)
C1': (54.111,166.771,88.920)
O4': (55.094,166.062,88.187)
C5': (57.474,165.693,88.276)
P: (59.000,164.519,86.498)
O2: (51.670,167.099,89.971)
C4': (56.379,166.722,88.333)
C2': (54.805,167.977,89.541)
O2': (54.680,169.058,88.639)
N1: (53.567,165.888,89.951)
N3: (51.804,165.396,91.431)
N4: (51.995,163.683,92.906)
C6: (54.287,164.837,90.435)
C5: (53.806,164.070,91.413)
O3': (57.194,168.482,89.765)
OP1: (59.173,163.353,87.390)
OP2: (58.996,164.334,85.033)
C4: (52.519,164.390,91.917)
O5': (57.666,165.264,86.922)
C3': (56.229,167.453,89.650)
C1': (54.111,166.771,88.920)
O4': (55.094,166.062,88.187)
C5': (57.474,165.693,88.276)
P: (59.000,164.519,86.498)
O2: (51.670,167.099,89.971)
C4': (56.379,166.722,88.333)
C2': (54.805,167.977,89.541)
O2': (54.680,169.058,88.639)
N1: (53.567,165.888,89.951)
N3: (51.804,165.396,91.431)
N4: (51.995,163.683,92.906)
C6: (54.287,164.837,90.435)
C5: (53.806,164.070,91.413)
O3': (57.194,168.482,89.765)
Image (generated by PyMOL):