Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01390:01683
Extra
PDB:
ATOM 1 O3' G A1389 57.550 164.186 78.735 1.00 41.80 O
ATOM 2 P C A1390 58.617 163.415 79.647 1.00 42.98 P
ATOM 3 OP1 C A1390 59.317 164.458 80.442 1.00 41.82 O
ATOM 4 OP2 C A1390 59.394 162.498 78.778 1.00 42.32 O
ATOM 5 O5' C A1390 57.740 162.524 80.627 1.00 40.98 O
ATOM 6 C5' C A1390 57.052 163.115 81.730 1.00 40.36 C
ATOM 7 C4' C A1390 55.963 162.200 82.209 1.00 39.26 C
ATOM 8 O4' C A1390 56.542 160.958 82.694 1.00 38.92 O
ATOM 9 C3' C A1390 55.125 162.754 83.352 1.00 40.24 C
ATOM 10 O3' C A1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 11 C2' C A1390 55.744 162.093 84.575 1.00 40.05 C
ATOM 12 O2' C A1390 54.856 161.966 85.667 1.00 41.00 O
ATOM 13 C1' C A1390 56.111 160.723 84.016 1.00 39.89 C
ATOM 14 N1 C A1390 57.191 160.061 84.766 1.00 40.86 N
ATOM 15 C2 C A1390 56.946 158.811 85.340 1.00 41.21 C
ATOM 16 O2 C A1390 55.846 158.276 85.174 1.00 40.94 O
ATOM 17 N3 C A1390 57.912 158.217 86.062 1.00 42.15 N
ATOM 18 C4 C A1390 59.091 158.817 86.220 1.00 43.52 C
ATOM 19 N4 C A1390 60.021 158.194 86.958 1.00 45.33 N
ATOM 20 C5 C A1390 59.374 160.081 85.633 1.00 42.87 C
ATOM 21 C6 C A1390 58.407 160.659 84.919 1.00 41.01 C
ATOM 22 P U A1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 23 OP1 U A1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 24 OP2 U A1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 25 O5' U A1391 51.913 163.969 83.412 1.00 41.93 O
TER
ATOM 1 O3' U B1682 60.040 165.461 86.589 1.00 36.36 O
ATOM 2 P C B1683 58.888 164.393 86.280 1.00 36.39 P
ATOM 3 OP1 C B1683 59.096 163.232 87.174 1.00 37.94 O
ATOM 4 OP2 C B1683 58.824 164.202 84.812 1.00 35.53 O
ATOM 5 O5' C B1683 57.540 165.114 86.706 1.00 37.39 O
ATOM 6 C5' C B1683 57.354 165.596 88.038 1.00 37.21 C
ATOM 7 C4' C B1683 56.275 166.646 88.053 1.00 37.86 C
ATOM 8 O4' C B1683 54.979 166.022 87.871 1.00 37.45 O
ATOM 9 C3' C B1683 56.128 167.383 89.365 1.00 39.34 C
ATOM 10 O3' C B1683 57.098 168.411 89.470 1.00 41.68 O
ATOM 11 C2' C B1683 54.708 167.908 89.264 1.00 39.43 C
ATOM 12 O2' C B1683 54.613 168.990 88.363 1.00 42.09 O
ATOM 13 C1' C B1683 54.007 166.701 88.648 1.00 37.98 C
ATOM 14 N1 C B1683 53.493 165.777 89.674 1.00 37.57 N
ATOM 15 C2 C B1683 52.207 165.972 90.170 1.00 37.90 C
ATOM 16 O2 C B1683 51.534 166.910 89.735 1.00 39.73 O
ATOM 17 N3 C B1683 51.728 165.140 91.112 1.00 37.70 N
ATOM 18 C4 C B1683 52.484 164.144 91.564 1.00 39.20 C
ATOM 19 N4 C B1683 51.973 163.347 92.498 1.00 42.71 N
ATOM 20 C5 C B1683 53.798 163.919 91.081 1.00 38.89 C
ATOM 21 C6 C B1683 54.259 164.750 90.143 1.00 38.67 C
ATOM 22 P G B1684 57.413 169.052 90.898 1.00 39.95 P
ATOM 23 OP1 G B1684 58.639 169.858 90.729 1.00 41.01 O
ATOM 24 OP2 G B1684 57.382 167.971 91.915 1.00 40.37 O
ATOM 25 O5' G B1684 56.168 170.015 91.121 1.00 40.34 O
TER
ATOM 2 P C A1390 58.617 163.415 79.647 1.00 42.98 P
ATOM 3 OP1 C A1390 59.317 164.458 80.442 1.00 41.82 O
ATOM 4 OP2 C A1390 59.394 162.498 78.778 1.00 42.32 O
ATOM 5 O5' C A1390 57.740 162.524 80.627 1.00 40.98 O
ATOM 6 C5' C A1390 57.052 163.115 81.730 1.00 40.36 C
ATOM 7 C4' C A1390 55.963 162.200 82.209 1.00 39.26 C
ATOM 8 O4' C A1390 56.542 160.958 82.694 1.00 38.92 O
ATOM 9 C3' C A1390 55.125 162.754 83.352 1.00 40.24 C
ATOM 10 O3' C A1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 11 C2' C A1390 55.744 162.093 84.575 1.00 40.05 C
ATOM 12 O2' C A1390 54.856 161.966 85.667 1.00 41.00 O
ATOM 13 C1' C A1390 56.111 160.723 84.016 1.00 39.89 C
ATOM 14 N1 C A1390 57.191 160.061 84.766 1.00 40.86 N
ATOM 15 C2 C A1390 56.946 158.811 85.340 1.00 41.21 C
ATOM 16 O2 C A1390 55.846 158.276 85.174 1.00 40.94 O
ATOM 17 N3 C A1390 57.912 158.217 86.062 1.00 42.15 N
ATOM 18 C4 C A1390 59.091 158.817 86.220 1.00 43.52 C
ATOM 19 N4 C A1390 60.021 158.194 86.958 1.00 45.33 N
ATOM 20 C5 C A1390 59.374 160.081 85.633 1.00 42.87 C
ATOM 21 C6 C A1390 58.407 160.659 84.919 1.00 41.01 C
ATOM 22 P U A1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 23 OP1 U A1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 24 OP2 U A1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 25 O5' U A1391 51.913 163.969 83.412 1.00 41.93 O
TER
ATOM 1 O3' U B1682 60.040 165.461 86.589 1.00 36.36 O
ATOM 2 P C B1683 58.888 164.393 86.280 1.00 36.39 P
ATOM 3 OP1 C B1683 59.096 163.232 87.174 1.00 37.94 O
ATOM 4 OP2 C B1683 58.824 164.202 84.812 1.00 35.53 O
ATOM 5 O5' C B1683 57.540 165.114 86.706 1.00 37.39 O
ATOM 6 C5' C B1683 57.354 165.596 88.038 1.00 37.21 C
ATOM 7 C4' C B1683 56.275 166.646 88.053 1.00 37.86 C
ATOM 8 O4' C B1683 54.979 166.022 87.871 1.00 37.45 O
ATOM 9 C3' C B1683 56.128 167.383 89.365 1.00 39.34 C
ATOM 10 O3' C B1683 57.098 168.411 89.470 1.00 41.68 O
ATOM 11 C2' C B1683 54.708 167.908 89.264 1.00 39.43 C
ATOM 12 O2' C B1683 54.613 168.990 88.363 1.00 42.09 O
ATOM 13 C1' C B1683 54.007 166.701 88.648 1.00 37.98 C
ATOM 14 N1 C B1683 53.493 165.777 89.674 1.00 37.57 N
ATOM 15 C2 C B1683 52.207 165.972 90.170 1.00 37.90 C
ATOM 16 O2 C B1683 51.534 166.910 89.735 1.00 39.73 O
ATOM 17 N3 C B1683 51.728 165.140 91.112 1.00 37.70 N
ATOM 18 C4 C B1683 52.484 164.144 91.564 1.00 39.20 C
ATOM 19 N4 C B1683 51.973 163.347 92.498 1.00 42.71 N
ATOM 20 C5 C B1683 53.798 163.919 91.081 1.00 38.89 C
ATOM 21 C6 C B1683 54.259 164.750 90.143 1.00 38.67 C
ATOM 22 P G B1684 57.413 169.052 90.898 1.00 39.95 P
ATOM 23 OP1 G B1684 58.639 169.858 90.729 1.00 41.01 O
ATOM 24 OP2 G B1684 57.382 167.971 91.915 1.00 40.37 O
ATOM 25 O5' G B1684 56.168 170.015 91.121 1.00 40.34 O
TER
Atoms:
C2: (56.946,158.811,85.340)
OP1: (59.317,164.458,80.442)
OP2: (59.394,162.498,78.778)
C4: (59.091,158.817,86.220)
O5': (57.740,162.524,80.627)
C3': (55.125,162.754,83.352)
C1': (56.111,160.723,84.016)
O4': (56.542,160.958,82.694)
C5': (57.052,163.115,81.730)
P: (58.617,163.415,79.647)
O2: (55.846,158.276,85.174)
C4': (55.963,162.200,82.209)
C2': (55.744,162.093,84.575)
O2': (54.856,161.966,85.667)
N1: (57.191,160.061,84.766)
N3: (57.912,158.217,86.062)
N4: (60.021,158.194,86.958)
C6: (58.407,160.659,84.919)
C5: (59.374,160.081,85.633)
O3': (53.791,162.318,83.172)
OP1: (59.317,164.458,80.442)
OP2: (59.394,162.498,78.778)
C4: (59.091,158.817,86.220)
O5': (57.740,162.524,80.627)
C3': (55.125,162.754,83.352)
C1': (56.111,160.723,84.016)
O4': (56.542,160.958,82.694)
C5': (57.052,163.115,81.730)
P: (58.617,163.415,79.647)
O2: (55.846,158.276,85.174)
C4': (55.963,162.200,82.209)
C2': (55.744,162.093,84.575)
O2': (54.856,161.966,85.667)
N1: (57.191,160.061,84.766)
N3: (57.912,158.217,86.062)
N4: (60.021,158.194,86.958)
C6: (58.407,160.659,84.919)
C5: (59.374,160.081,85.633)
O3': (53.791,162.318,83.172)
C2: (52.207,165.972,90.170)
OP1: (59.096,163.232,87.174)
OP2: (58.824,164.202,84.812)
C4: (52.484,164.144,91.564)
O5': (57.540,165.114,86.706)
C3': (56.128,167.383,89.365)
C1': (54.007,166.701,88.648)
O4': (54.979,166.022,87.871)
C5': (57.354,165.596,88.038)
P: (58.888,164.393,86.280)
O2: (51.534,166.910,89.735)
C4': (56.275,166.646,88.053)
C2': (54.708,167.908,89.264)
O2': (54.613,168.990,88.363)
N1: (53.493,165.777,89.674)
N3: (51.728,165.140,91.112)
N4: (51.973,163.347,92.498)
C6: (54.259,164.750,90.143)
C5: (53.798,163.919,91.081)
O3': (57.098,168.411,89.470)
OP1: (59.096,163.232,87.174)
OP2: (58.824,164.202,84.812)
C4: (52.484,164.144,91.564)
O5': (57.540,165.114,86.706)
C3': (56.128,167.383,89.365)
C1': (54.007,166.701,88.648)
O4': (54.979,166.022,87.871)
C5': (57.354,165.596,88.038)
P: (58.888,164.393,86.280)
O2: (51.534,166.910,89.735)
C4': (56.275,166.646,88.053)
C2': (54.708,167.908,89.264)
O2': (54.613,168.990,88.363)
N1: (53.493,165.777,89.674)
N3: (51.728,165.140,91.112)
N4: (51.973,163.347,92.498)
C6: (54.259,164.750,90.143)
C5: (53.798,163.919,91.081)
O3': (57.098,168.411,89.470)
Image (generated by PyMOL):