Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2171:A2172
Extra
PDB:
ATOM 1 O3' C A2170 -112.306 1.693 71.878 1.00125.38 O
ATOM 2 P C A2171 -111.345 1.455 70.602 1.00125.47 P
ATOM 3 OP1 C A2171 -111.571 0.062 70.132 1.00125.47 O
ATOM 4 OP2 C A2171 -109.971 1.864 70.998 1.00125.47 O
ATOM 5 O5' C A2171 -111.935 2.493 69.539 1.00125.47 O
ATOM 6 C5' C A2171 -111.258 2.777 68.323 1.00125.47 C
ATOM 7 C4' C A2171 -112.102 2.411 67.127 1.00125.47 C
ATOM 8 O4' C A2171 -113.330 3.194 67.123 1.00125.47 O
ATOM 9 C3' C A2171 -111.510 2.710 65.765 1.00125.47 C
ATOM 10 O3' C A2171 -110.492 1.816 65.362 1.00125.47 O
ATOM 11 C2' C A2171 -112.750 2.688 64.883 1.00125.47 C
ATOM 12 O2' C A2171 -113.226 1.357 64.697 1.00125.47 O
ATOM 13 C1' C A2171 -113.730 3.434 65.783 1.00125.47 C
ATOM 14 N1 C A2171 -113.700 4.895 65.532 1.00125.35 N
ATOM 15 C2 C A2171 -114.901 5.554 65.259 1.00125.35 C
ATOM 16 O2 C A2171 -115.951 4.900 65.244 1.00125.35 O
ATOM 17 N3 C A2171 -114.903 6.889 65.017 1.00125.35 N
ATOM 18 C4 C A2171 -113.761 7.576 65.021 1.00125.35 C
ATOM 19 N4 C A2171 -113.818 8.895 64.776 1.00125.35 N
ATOM 20 C5 C A2171 -112.517 6.931 65.289 1.00125.35 C
ATOM 21 C6 C A2171 -112.531 5.611 65.532 1.00125.35 C
ATOM 22 P C A2172 -109.690 2.103 64.000 1.00 96.43 P
ATOM 23 OP1 C A2172 -108.468 1.249 64.012 1.00 96.43 O
ATOM 24 OP2 C A2172 -109.532 3.583 63.887 1.00 96.43 O
ATOM 25 O5' C A2172 -110.713 1.584 62.897 1.00 96.43 O
TER
ATOM 1 O3' C B2171 -110.492 1.816 65.362 1.00125.47 O
ATOM 2 P C B2172 -109.690 2.103 64.000 1.00 96.43 P
ATOM 3 OP1 C B2172 -108.468 1.249 64.012 1.00 96.43 O
ATOM 4 OP2 C B2172 -109.532 3.583 63.887 1.00 96.43 O
ATOM 5 O5' C B2172 -110.713 1.584 62.897 1.00 96.43 O
ATOM 6 C5' C B2172 -110.257 0.912 61.745 1.00 96.43 C
ATOM 7 C4' C B2172 -111.070 1.280 60.533 1.00 96.43 C
ATOM 8 O4' C B2172 -112.324 1.918 60.928 1.00 96.43 O
ATOM 9 C3' C B2172 -110.462 2.316 59.618 1.00 96.43 C
ATOM 10 O3' C B2172 -109.368 1.852 58.857 1.00 96.43 O
ATOM 11 C2' C B2172 -111.672 2.739 58.807 1.00 96.43 C
ATOM 12 O2' C B2172 -112.096 1.691 57.940 1.00 96.43 O
ATOM 13 C1' C B2172 -112.689 2.878 59.937 1.00 96.43 C
ATOM 14 N1 C B2172 -112.635 4.242 60.540 1.00 94.91 N
ATOM 15 C2 C B2172 -113.165 5.337 59.817 1.00 94.91 C
ATOM 16 O2 C B2172 -113.697 5.151 58.705 1.00 94.91 O
ATOM 17 N3 C B2172 -113.095 6.592 60.347 1.00 94.91 N
ATOM 18 C4 C B2172 -112.517 6.778 61.543 1.00 94.91 C
ATOM 19 N4 C B2172 -112.472 8.028 62.027 1.00 94.91 N
ATOM 20 C5 C B2172 -111.958 5.692 62.287 1.00 94.91 C
ATOM 21 C6 C B2172 -112.030 4.462 61.754 1.00 94.91 C
ATOM 22 P U B2173 -108.112 2.825 58.642 1.00106.27 P
ATOM 23 OP1 U B2173 -106.945 1.979 58.287 1.00106.27 O
ATOM 24 OP2 U B2173 -108.025 3.697 59.846 1.00106.27 O
ATOM 25 O5' U B2173 -108.565 3.683 57.387 1.00106.27 O
TER
ATOM 2 P C A2171 -111.345 1.455 70.602 1.00125.47 P
ATOM 3 OP1 C A2171 -111.571 0.062 70.132 1.00125.47 O
ATOM 4 OP2 C A2171 -109.971 1.864 70.998 1.00125.47 O
ATOM 5 O5' C A2171 -111.935 2.493 69.539 1.00125.47 O
ATOM 6 C5' C A2171 -111.258 2.777 68.323 1.00125.47 C
ATOM 7 C4' C A2171 -112.102 2.411 67.127 1.00125.47 C
ATOM 8 O4' C A2171 -113.330 3.194 67.123 1.00125.47 O
ATOM 9 C3' C A2171 -111.510 2.710 65.765 1.00125.47 C
ATOM 10 O3' C A2171 -110.492 1.816 65.362 1.00125.47 O
ATOM 11 C2' C A2171 -112.750 2.688 64.883 1.00125.47 C
ATOM 12 O2' C A2171 -113.226 1.357 64.697 1.00125.47 O
ATOM 13 C1' C A2171 -113.730 3.434 65.783 1.00125.47 C
ATOM 14 N1 C A2171 -113.700 4.895 65.532 1.00125.35 N
ATOM 15 C2 C A2171 -114.901 5.554 65.259 1.00125.35 C
ATOM 16 O2 C A2171 -115.951 4.900 65.244 1.00125.35 O
ATOM 17 N3 C A2171 -114.903 6.889 65.017 1.00125.35 N
ATOM 18 C4 C A2171 -113.761 7.576 65.021 1.00125.35 C
ATOM 19 N4 C A2171 -113.818 8.895 64.776 1.00125.35 N
ATOM 20 C5 C A2171 -112.517 6.931 65.289 1.00125.35 C
ATOM 21 C6 C A2171 -112.531 5.611 65.532 1.00125.35 C
ATOM 22 P C A2172 -109.690 2.103 64.000 1.00 96.43 P
ATOM 23 OP1 C A2172 -108.468 1.249 64.012 1.00 96.43 O
ATOM 24 OP2 C A2172 -109.532 3.583 63.887 1.00 96.43 O
ATOM 25 O5' C A2172 -110.713 1.584 62.897 1.00 96.43 O
TER
ATOM 1 O3' C B2171 -110.492 1.816 65.362 1.00125.47 O
ATOM 2 P C B2172 -109.690 2.103 64.000 1.00 96.43 P
ATOM 3 OP1 C B2172 -108.468 1.249 64.012 1.00 96.43 O
ATOM 4 OP2 C B2172 -109.532 3.583 63.887 1.00 96.43 O
ATOM 5 O5' C B2172 -110.713 1.584 62.897 1.00 96.43 O
ATOM 6 C5' C B2172 -110.257 0.912 61.745 1.00 96.43 C
ATOM 7 C4' C B2172 -111.070 1.280 60.533 1.00 96.43 C
ATOM 8 O4' C B2172 -112.324 1.918 60.928 1.00 96.43 O
ATOM 9 C3' C B2172 -110.462 2.316 59.618 1.00 96.43 C
ATOM 10 O3' C B2172 -109.368 1.852 58.857 1.00 96.43 O
ATOM 11 C2' C B2172 -111.672 2.739 58.807 1.00 96.43 C
ATOM 12 O2' C B2172 -112.096 1.691 57.940 1.00 96.43 O
ATOM 13 C1' C B2172 -112.689 2.878 59.937 1.00 96.43 C
ATOM 14 N1 C B2172 -112.635 4.242 60.540 1.00 94.91 N
ATOM 15 C2 C B2172 -113.165 5.337 59.817 1.00 94.91 C
ATOM 16 O2 C B2172 -113.697 5.151 58.705 1.00 94.91 O
ATOM 17 N3 C B2172 -113.095 6.592 60.347 1.00 94.91 N
ATOM 18 C4 C B2172 -112.517 6.778 61.543 1.00 94.91 C
ATOM 19 N4 C B2172 -112.472 8.028 62.027 1.00 94.91 N
ATOM 20 C5 C B2172 -111.958 5.692 62.287 1.00 94.91 C
ATOM 21 C6 C B2172 -112.030 4.462 61.754 1.00 94.91 C
ATOM 22 P U B2173 -108.112 2.825 58.642 1.00106.27 P
ATOM 23 OP1 U B2173 -106.945 1.979 58.287 1.00106.27 O
ATOM 24 OP2 U B2173 -108.025 3.697 59.846 1.00106.27 O
ATOM 25 O5' U B2173 -108.565 3.683 57.387 1.00106.27 O
TER
Atoms:
C2: (-114.901,5.554,65.259)
OP1: (-111.571,0.062,70.132)
OP2: (-109.971,1.864,70.998)
C4: (-113.761,7.576,65.021)
O5': (-111.935,2.493,69.539)
C3': (-111.510,2.710,65.765)
C1': (-113.730,3.434,65.783)
O4': (-113.330,3.194,67.123)
C5': (-111.258,2.777,68.323)
P: (-111.345,1.455,70.602)
O2: (-115.951,4.900,65.244)
C4': (-112.102,2.411,67.127)
C2': (-112.750,2.688,64.883)
O2': (-113.226,1.357,64.697)
N1: (-113.700,4.895,65.532)
N3: (-114.903,6.889,65.017)
N4: (-113.818,8.895,64.776)
C6: (-112.531,5.611,65.532)
C5: (-112.517,6.931,65.289)
O3': (-110.492,1.816,65.362)
OP1: (-111.571,0.062,70.132)
OP2: (-109.971,1.864,70.998)
C4: (-113.761,7.576,65.021)
O5': (-111.935,2.493,69.539)
C3': (-111.510,2.710,65.765)
C1': (-113.730,3.434,65.783)
O4': (-113.330,3.194,67.123)
C5': (-111.258,2.777,68.323)
P: (-111.345,1.455,70.602)
O2: (-115.951,4.900,65.244)
C4': (-112.102,2.411,67.127)
C2': (-112.750,2.688,64.883)
O2': (-113.226,1.357,64.697)
N1: (-113.700,4.895,65.532)
N3: (-114.903,6.889,65.017)
N4: (-113.818,8.895,64.776)
C6: (-112.531,5.611,65.532)
C5: (-112.517,6.931,65.289)
O3': (-110.492,1.816,65.362)
C2: (-113.165,5.337,59.817)
OP1: (-108.468,1.249,64.012)
OP2: (-109.532,3.583,63.887)
C4: (-112.517,6.778,61.543)
O5': (-110.713,1.584,62.897)
C3': (-110.462,2.316,59.618)
C1': (-112.689,2.878,59.937)
O4': (-112.324,1.918,60.928)
C5': (-110.257,0.912,61.745)
P: (-109.690,2.103,64.000)
O2: (-113.697,5.151,58.705)
C4': (-111.070,1.280,60.533)
C2': (-111.672,2.739,58.807)
O2': (-112.096,1.691,57.940)
N1: (-112.635,4.242,60.540)
N3: (-113.095,6.592,60.347)
N4: (-112.472,8.028,62.027)
C6: (-112.030,4.462,61.754)
C5: (-111.958,5.692,62.287)
O3': (-109.368,1.852,58.857)
OP1: (-108.468,1.249,64.012)
OP2: (-109.532,3.583,63.887)
C4: (-112.517,6.778,61.543)
O5': (-110.713,1.584,62.897)
C3': (-110.462,2.316,59.618)
C1': (-112.689,2.878,59.937)
O4': (-112.324,1.918,60.928)
C5': (-110.257,0.912,61.745)
P: (-109.690,2.103,64.000)
O2: (-113.697,5.151,58.705)
C4': (-111.070,1.280,60.533)
C2': (-111.672,2.739,58.807)
O2': (-112.096,1.691,57.940)
N1: (-112.635,4.242,60.540)
N3: (-113.095,6.592,60.347)
N4: (-112.472,8.028,62.027)
C6: (-112.030,4.462,61.754)
C5: (-111.958,5.692,62.287)
O3': (-109.368,1.852,58.857)
Image (generated by PyMOL):