Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HJW:D26:D27
Extra
PDB:
ATOM 1 O3' U A 25 57.132 -21.302 27.312 1.00 93.14 O
ATOM 2 P C A 26 55.672 -20.858 26.813 1.00 93.94 P
ATOM 3 OP1 C A 26 55.001 -20.212 27.966 1.00 94.00 O
ATOM 4 OP2 C A 26 55.031 -22.027 26.159 1.00 93.74 O
ATOM 5 O5' C A 26 55.957 -19.725 25.713 1.00 93.06 O
ATOM 6 C5' C A 26 56.358 -20.049 24.375 1.00 91.81 C
ATOM 7 C4' C A 26 57.271 -18.952 23.860 1.00 90.42 C
ATOM 8 O4' C A 26 58.076 -19.351 22.716 1.00 91.10 O
ATOM 9 C3' C A 26 56.588 -17.725 23.282 1.00 88.74 C
ATOM 10 O3' C A 26 55.777 -17.009 24.211 1.00 84.95 O
ATOM 11 C2' C A 26 57.850 -17.001 22.823 1.00 89.95 C
ATOM 12 O2' C A 26 58.696 -16.605 23.888 1.00 90.19 O
ATOM 13 C1' C A 26 58.499 -18.157 22.058 1.00 91.10 C
ATOM 14 N1 C A 26 58.165 -18.154 20.571 1.00 91.89 N
ATOM 15 C2 C A 26 59.195 -18.021 19.614 1.00 92.12 C
ATOM 16 O2 C A 26 60.377 -17.920 19.980 1.00 91.82 O
ATOM 17 N3 C A 26 58.864 -18.009 18.290 1.00 92.21 N
ATOM 18 C4 C A 26 57.583 -18.120 17.906 1.00 92.18 C
ATOM 19 N4 C A 26 57.309 -18.105 16.597 1.00 91.73 N
ATOM 20 C5 C A 26 56.522 -18.250 18.855 1.00 92.15 C
ATOM 21 C6 C A 26 56.857 -18.260 20.153 1.00 92.05 C
ATOM 22 P A A 27 54.362 -16.438 23.707 1.00 82.10 P
ATOM 23 OP1 A A 27 53.329 -16.862 24.678 1.00 81.75 O
ATOM 24 OP2 A A 27 54.202 -16.779 22.270 1.00 82.33 O
ATOM 25 O5' A A 27 54.556 -14.855 23.840 1.00 78.33 O
TER
ATOM 1 O3' C B 26 55.777 -17.009 24.211 1.00 84.95 O
ATOM 2 P A B 27 54.362 -16.438 23.707 1.00 82.10 P
ATOM 3 OP1 A B 27 53.329 -16.862 24.678 1.00 81.75 O
ATOM 4 OP2 A B 27 54.202 -16.779 22.270 1.00 82.33 O
ATOM 5 O5' A B 27 54.556 -14.855 23.840 1.00 78.33 O
ATOM 6 C5' A B 27 53.966 -13.955 22.894 1.00 73.03 C
ATOM 7 C4' A B 27 53.444 -12.702 23.580 1.00 68.98 C
ATOM 8 O4' A B 27 51.998 -12.787 23.662 1.00 67.44 O
ATOM 9 C3' A B 27 53.974 -12.516 25.002 1.00 66.60 C
ATOM 10 O3' A B 27 54.694 -11.242 25.206 1.00 63.87 O
ATOM 11 C2' A B 27 52.777 -12.837 25.915 1.00 66.38 C
ATOM 12 O2' A B 27 52.647 -11.981 27.033 1.00 66.85 O
ATOM 13 C1' A B 27 51.551 -12.740 25.001 1.00 65.75 C
ATOM 14 N9 A B 27 50.568 -13.811 25.191 1.00 64.91 N
ATOM 15 C8 A B 27 50.814 -15.153 25.327 1.00 64.99 C
ATOM 16 N7 A B 27 49.739 -15.889 25.491 1.00 64.25 N
ATOM 17 C5 A B 27 48.708 -14.967 25.454 1.00 64.13 C
ATOM 18 C6 A B 27 47.308 -15.106 25.571 1.00 63.84 C
ATOM 19 N6 A B 27 46.696 -16.282 25.752 1.00 63.97 N
ATOM 20 N1 A B 27 46.559 -13.981 25.496 1.00 64.10 N
ATOM 21 C2 A B 27 47.169 -12.799 25.317 1.00 64.08 C
ATOM 22 N3 A B 27 48.475 -12.548 25.195 1.00 64.11 N
ATOM 23 C4 A B 27 49.199 -13.682 25.271 1.00 64.23 C
ATOM 24 P A B 28 54.170 -9.727 25.025 1.00 59.99 P
ATOM 25 OP1 A B 28 52.702 -9.713 25.142 1.00 62.25 O
ATOM 26 OP2 A B 28 54.779 -9.149 23.818 1.00 61.82 O
ATOM 27 O5' A B 28 54.798 -8.955 26.271 1.00 57.28 O
TER
ATOM 2 P C A 26 55.672 -20.858 26.813 1.00 93.94 P
ATOM 3 OP1 C A 26 55.001 -20.212 27.966 1.00 94.00 O
ATOM 4 OP2 C A 26 55.031 -22.027 26.159 1.00 93.74 O
ATOM 5 O5' C A 26 55.957 -19.725 25.713 1.00 93.06 O
ATOM 6 C5' C A 26 56.358 -20.049 24.375 1.00 91.81 C
ATOM 7 C4' C A 26 57.271 -18.952 23.860 1.00 90.42 C
ATOM 8 O4' C A 26 58.076 -19.351 22.716 1.00 91.10 O
ATOM 9 C3' C A 26 56.588 -17.725 23.282 1.00 88.74 C
ATOM 10 O3' C A 26 55.777 -17.009 24.211 1.00 84.95 O
ATOM 11 C2' C A 26 57.850 -17.001 22.823 1.00 89.95 C
ATOM 12 O2' C A 26 58.696 -16.605 23.888 1.00 90.19 O
ATOM 13 C1' C A 26 58.499 -18.157 22.058 1.00 91.10 C
ATOM 14 N1 C A 26 58.165 -18.154 20.571 1.00 91.89 N
ATOM 15 C2 C A 26 59.195 -18.021 19.614 1.00 92.12 C
ATOM 16 O2 C A 26 60.377 -17.920 19.980 1.00 91.82 O
ATOM 17 N3 C A 26 58.864 -18.009 18.290 1.00 92.21 N
ATOM 18 C4 C A 26 57.583 -18.120 17.906 1.00 92.18 C
ATOM 19 N4 C A 26 57.309 -18.105 16.597 1.00 91.73 N
ATOM 20 C5 C A 26 56.522 -18.250 18.855 1.00 92.15 C
ATOM 21 C6 C A 26 56.857 -18.260 20.153 1.00 92.05 C
ATOM 22 P A A 27 54.362 -16.438 23.707 1.00 82.10 P
ATOM 23 OP1 A A 27 53.329 -16.862 24.678 1.00 81.75 O
ATOM 24 OP2 A A 27 54.202 -16.779 22.270 1.00 82.33 O
ATOM 25 O5' A A 27 54.556 -14.855 23.840 1.00 78.33 O
TER
ATOM 1 O3' C B 26 55.777 -17.009 24.211 1.00 84.95 O
ATOM 2 P A B 27 54.362 -16.438 23.707 1.00 82.10 P
ATOM 3 OP1 A B 27 53.329 -16.862 24.678 1.00 81.75 O
ATOM 4 OP2 A B 27 54.202 -16.779 22.270 1.00 82.33 O
ATOM 5 O5' A B 27 54.556 -14.855 23.840 1.00 78.33 O
ATOM 6 C5' A B 27 53.966 -13.955 22.894 1.00 73.03 C
ATOM 7 C4' A B 27 53.444 -12.702 23.580 1.00 68.98 C
ATOM 8 O4' A B 27 51.998 -12.787 23.662 1.00 67.44 O
ATOM 9 C3' A B 27 53.974 -12.516 25.002 1.00 66.60 C
ATOM 10 O3' A B 27 54.694 -11.242 25.206 1.00 63.87 O
ATOM 11 C2' A B 27 52.777 -12.837 25.915 1.00 66.38 C
ATOM 12 O2' A B 27 52.647 -11.981 27.033 1.00 66.85 O
ATOM 13 C1' A B 27 51.551 -12.740 25.001 1.00 65.75 C
ATOM 14 N9 A B 27 50.568 -13.811 25.191 1.00 64.91 N
ATOM 15 C8 A B 27 50.814 -15.153 25.327 1.00 64.99 C
ATOM 16 N7 A B 27 49.739 -15.889 25.491 1.00 64.25 N
ATOM 17 C5 A B 27 48.708 -14.967 25.454 1.00 64.13 C
ATOM 18 C6 A B 27 47.308 -15.106 25.571 1.00 63.84 C
ATOM 19 N6 A B 27 46.696 -16.282 25.752 1.00 63.97 N
ATOM 20 N1 A B 27 46.559 -13.981 25.496 1.00 64.10 N
ATOM 21 C2 A B 27 47.169 -12.799 25.317 1.00 64.08 C
ATOM 22 N3 A B 27 48.475 -12.548 25.195 1.00 64.11 N
ATOM 23 C4 A B 27 49.199 -13.682 25.271 1.00 64.23 C
ATOM 24 P A B 28 54.170 -9.727 25.025 1.00 59.99 P
ATOM 25 OP1 A B 28 52.702 -9.713 25.142 1.00 62.25 O
ATOM 26 OP2 A B 28 54.779 -9.149 23.818 1.00 61.82 O
ATOM 27 O5' A B 28 54.798 -8.955 26.271 1.00 57.28 O
TER
Atoms:
C2: (59.195,-18.021,19.614)
OP1: (55.001,-20.212,27.966)
OP2: (55.031,-22.027,26.159)
C4: (57.583,-18.120,17.906)
O5': (55.957,-19.725,25.713)
C3': (56.588,-17.725,23.282)
C1': (58.499,-18.157,22.058)
O4': (58.076,-19.351,22.716)
C5': (56.358,-20.049,24.375)
P: (55.672,-20.858,26.813)
O2: (60.377,-17.920,19.980)
C4': (57.271,-18.952,23.860)
C2': (57.850,-17.001,22.823)
O2': (58.696,-16.605,23.888)
N1: (58.165,-18.154,20.571)
N3: (58.864,-18.009,18.290)
N4: (57.309,-18.105,16.597)
C6: (56.857,-18.260,20.153)
C5: (56.522,-18.250,18.855)
O3': (55.777,-17.009,24.211)
OP1: (55.001,-20.212,27.966)
OP2: (55.031,-22.027,26.159)
C4: (57.583,-18.120,17.906)
O5': (55.957,-19.725,25.713)
C3': (56.588,-17.725,23.282)
C1': (58.499,-18.157,22.058)
O4': (58.076,-19.351,22.716)
C5': (56.358,-20.049,24.375)
P: (55.672,-20.858,26.813)
O2: (60.377,-17.920,19.980)
C4': (57.271,-18.952,23.860)
C2': (57.850,-17.001,22.823)
O2': (58.696,-16.605,23.888)
N1: (58.165,-18.154,20.571)
N3: (58.864,-18.009,18.290)
N4: (57.309,-18.105,16.597)
C6: (56.857,-18.260,20.153)
C5: (56.522,-18.250,18.855)
O3': (55.777,-17.009,24.211)
OP1: (53.329,-16.862,24.678)
OP2: (54.202,-16.779,22.270)
C3': (53.974,-12.516,25.002)
C1': (51.551,-12.740,25.001)
C5': (53.966,-13.955,22.894)
O4': (51.998,-12.787,23.662)
C8: (50.814,-15.153,25.327)
O2': (52.647,-11.981,27.033)
C6: (47.308,-15.106,25.571)
C5: (48.708,-14.967,25.454)
C4: (49.199,-13.682,25.271)
P: (54.362,-16.438,23.707)
C4': (53.444,-12.702,23.580)
C2': (52.777,-12.837,25.915)
C2: (47.169,-12.799,25.317)
N1: (46.559,-13.981,25.496)
N3: (48.475,-12.548,25.195)
N6: (46.696,-16.282,25.752)
N7: (49.739,-15.889,25.491)
N9: (50.568,-13.811,25.191)
O5': (54.556,-14.855,23.840)
O3': (54.694,-11.242,25.206)
OP2: (54.202,-16.779,22.270)
C3': (53.974,-12.516,25.002)
C1': (51.551,-12.740,25.001)
C5': (53.966,-13.955,22.894)
O4': (51.998,-12.787,23.662)
C8: (50.814,-15.153,25.327)
O2': (52.647,-11.981,27.033)
C6: (47.308,-15.106,25.571)
C5: (48.708,-14.967,25.454)
C4: (49.199,-13.682,25.271)
P: (54.362,-16.438,23.707)
C4': (53.444,-12.702,23.580)
C2': (52.777,-12.837,25.915)
C2: (47.169,-12.799,25.317)
N1: (46.559,-13.981,25.496)
N3: (48.475,-12.548,25.195)
N6: (46.696,-16.282,25.752)
N7: (49.739,-15.889,25.491)
N9: (50.568,-13.811,25.191)
O5': (54.556,-14.855,23.840)
O3': (54.694,-11.242,25.206)
Image (generated by PyMOL):