Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:D10:D9
Extra
PDB:
ATOM 1 O3' A A 9 5.142 9.123 5.776 1.00 54.94 O
ATOM 2 P C A 10 5.384 7.780 4.942 1.00 56.70 P
ATOM 3 OP1 C A 10 6.359 8.075 3.863 1.00 65.81 O
ATOM 4 OP2 C A 10 4.034 7.260 4.604 1.00 51.18 O
ATOM 5 O5' C A 10 6.128 6.832 5.979 1.00 44.51 O
ATOM 6 C5' C A 10 7.234 7.329 6.724 1.00 43.10 C
ATOM 7 C4' C A 10 7.517 6.435 7.897 1.00 45.52 C
ATOM 8 O4' C A 10 6.422 6.511 8.842 1.00 42.83 O
ATOM 9 C3' C A 10 7.574 4.968 7.534 1.00 45.20 C
ATOM 10 O3' C A 10 8.853 4.628 7.041 1.00 50.33 O
ATOM 11 C2' C A 10 7.298 4.300 8.867 1.00 49.74 C
ATOM 12 O2' C A 10 8.480 4.235 9.646 1.00 43.81 O
ATOM 13 C1' C A 10 6.251 5.248 9.471 1.00 40.89 C
ATOM 14 N1 C A 10 4.848 4.819 9.276 1.00 37.29 N
ATOM 15 C2 C A 10 4.356 3.729 10.009 1.00 37.61 C
ATOM 16 O2 C A 10 5.098 3.163 10.795 1.00 40.77 O
ATOM 17 N3 C A 10 3.081 3.331 9.836 1.00 34.68 N
ATOM 18 C4 C A 10 2.298 3.971 8.970 1.00 39.93 C
ATOM 19 N4 C A 10 1.044 3.528 8.816 1.00 31.44 N
ATOM 20 C5 C A 10 2.763 5.091 8.221 1.00 36.98 C
ATOM 21 C6 C A 10 4.033 5.474 8.402 1.00 26.73 C
ATOM 22 P A A 11 8.981 3.659 5.755 1.00 46.32 P
ATOM 23 OP1 A A 11 10.254 3.971 5.069 1.00 55.82 O
ATOM 24 OP2 A A 11 7.686 3.794 5.031 1.00 43.88 O
ATOM 25 O5' A A 11 9.132 2.211 6.396 1.00 36.85 O
TER
ATOM 1 O3' U B 8 1.125 13.228 4.263 1.00 67.03 O
ATOM 2 P A B 9 1.905 12.143 3.314 1.00 55.25 P
ATOM 3 OP1 A B 9 3.085 12.659 2.598 1.00 65.14 O
ATOM 4 OP2 A B 9 0.871 11.419 2.544 1.00 53.50 O
ATOM 5 O5' A B 9 2.552 11.227 4.431 1.00 53.04 O
ATOM 6 C5' A B 9 3.552 11.786 5.281 1.00 64.25 C
ATOM 7 C4' A B 9 3.767 10.929 6.499 1.00 65.13 C
ATOM 8 O4' A B 9 2.670 11.068 7.434 1.00 66.09 O
ATOM 9 C3' A B 9 3.842 9.444 6.222 1.00 59.31 C
ATOM 10 O3' A B 9 5.142 9.123 5.776 1.00 54.94 O
ATOM 11 C2' A B 9 3.536 8.855 7.590 1.00 57.43 C
ATOM 12 O2' A B 9 4.670 8.782 8.428 1.00 55.14 O
ATOM 13 C1' A B 9 2.494 9.845 8.126 1.00 56.66 C
ATOM 14 N9 A B 9 1.146 9.376 7.846 1.00 52.59 N
ATOM 15 C8 A B 9 0.281 9.806 6.876 1.00 54.16 C
ATOM 16 N7 A B 9 -0.844 9.135 6.840 1.00 52.80 N
ATOM 17 C5 A B 9 -0.714 8.218 7.870 1.00 43.45 C
ATOM 18 C6 A B 9 -1.556 7.215 8.341 1.00 46.52 C
ATOM 19 N6 A B 9 -2.768 6.978 7.832 1.00 34.56 N
ATOM 20 N1 A B 9 -1.116 6.453 9.372 1.00 39.88 N
ATOM 21 C2 A B 9 0.091 6.713 9.891 1.00 51.59 C
ATOM 22 N3 A B 9 0.973 7.642 9.534 1.00 39.14 N
ATOM 23 C4 A B 9 0.503 8.363 8.504 1.00 48.38 C
ATOM 24 P C B 10 5.384 7.780 4.942 1.00 56.70 P
ATOM 25 OP1 C B 10 6.359 8.075 3.863 1.00 65.81 O
ATOM 26 OP2 C B 10 4.034 7.260 4.604 1.00 51.18 O
ATOM 27 O5' C B 10 6.128 6.832 5.979 1.00 44.51 O
TER
ATOM 2 P C A 10 5.384 7.780 4.942 1.00 56.70 P
ATOM 3 OP1 C A 10 6.359 8.075 3.863 1.00 65.81 O
ATOM 4 OP2 C A 10 4.034 7.260 4.604 1.00 51.18 O
ATOM 5 O5' C A 10 6.128 6.832 5.979 1.00 44.51 O
ATOM 6 C5' C A 10 7.234 7.329 6.724 1.00 43.10 C
ATOM 7 C4' C A 10 7.517 6.435 7.897 1.00 45.52 C
ATOM 8 O4' C A 10 6.422 6.511 8.842 1.00 42.83 O
ATOM 9 C3' C A 10 7.574 4.968 7.534 1.00 45.20 C
ATOM 10 O3' C A 10 8.853 4.628 7.041 1.00 50.33 O
ATOM 11 C2' C A 10 7.298 4.300 8.867 1.00 49.74 C
ATOM 12 O2' C A 10 8.480 4.235 9.646 1.00 43.81 O
ATOM 13 C1' C A 10 6.251 5.248 9.471 1.00 40.89 C
ATOM 14 N1 C A 10 4.848 4.819 9.276 1.00 37.29 N
ATOM 15 C2 C A 10 4.356 3.729 10.009 1.00 37.61 C
ATOM 16 O2 C A 10 5.098 3.163 10.795 1.00 40.77 O
ATOM 17 N3 C A 10 3.081 3.331 9.836 1.00 34.68 N
ATOM 18 C4 C A 10 2.298 3.971 8.970 1.00 39.93 C
ATOM 19 N4 C A 10 1.044 3.528 8.816 1.00 31.44 N
ATOM 20 C5 C A 10 2.763 5.091 8.221 1.00 36.98 C
ATOM 21 C6 C A 10 4.033 5.474 8.402 1.00 26.73 C
ATOM 22 P A A 11 8.981 3.659 5.755 1.00 46.32 P
ATOM 23 OP1 A A 11 10.254 3.971 5.069 1.00 55.82 O
ATOM 24 OP2 A A 11 7.686 3.794 5.031 1.00 43.88 O
ATOM 25 O5' A A 11 9.132 2.211 6.396 1.00 36.85 O
TER
ATOM 1 O3' U B 8 1.125 13.228 4.263 1.00 67.03 O
ATOM 2 P A B 9 1.905 12.143 3.314 1.00 55.25 P
ATOM 3 OP1 A B 9 3.085 12.659 2.598 1.00 65.14 O
ATOM 4 OP2 A B 9 0.871 11.419 2.544 1.00 53.50 O
ATOM 5 O5' A B 9 2.552 11.227 4.431 1.00 53.04 O
ATOM 6 C5' A B 9 3.552 11.786 5.281 1.00 64.25 C
ATOM 7 C4' A B 9 3.767 10.929 6.499 1.00 65.13 C
ATOM 8 O4' A B 9 2.670 11.068 7.434 1.00 66.09 O
ATOM 9 C3' A B 9 3.842 9.444 6.222 1.00 59.31 C
ATOM 10 O3' A B 9 5.142 9.123 5.776 1.00 54.94 O
ATOM 11 C2' A B 9 3.536 8.855 7.590 1.00 57.43 C
ATOM 12 O2' A B 9 4.670 8.782 8.428 1.00 55.14 O
ATOM 13 C1' A B 9 2.494 9.845 8.126 1.00 56.66 C
ATOM 14 N9 A B 9 1.146 9.376 7.846 1.00 52.59 N
ATOM 15 C8 A B 9 0.281 9.806 6.876 1.00 54.16 C
ATOM 16 N7 A B 9 -0.844 9.135 6.840 1.00 52.80 N
ATOM 17 C5 A B 9 -0.714 8.218 7.870 1.00 43.45 C
ATOM 18 C6 A B 9 -1.556 7.215 8.341 1.00 46.52 C
ATOM 19 N6 A B 9 -2.768 6.978 7.832 1.00 34.56 N
ATOM 20 N1 A B 9 -1.116 6.453 9.372 1.00 39.88 N
ATOM 21 C2 A B 9 0.091 6.713 9.891 1.00 51.59 C
ATOM 22 N3 A B 9 0.973 7.642 9.534 1.00 39.14 N
ATOM 23 C4 A B 9 0.503 8.363 8.504 1.00 48.38 C
ATOM 24 P C B 10 5.384 7.780 4.942 1.00 56.70 P
ATOM 25 OP1 C B 10 6.359 8.075 3.863 1.00 65.81 O
ATOM 26 OP2 C B 10 4.034 7.260 4.604 1.00 51.18 O
ATOM 27 O5' C B 10 6.128 6.832 5.979 1.00 44.51 O
TER
Atoms:
C2: (4.356,3.729,10.009)
OP1: (6.359,8.075,3.863)
OP2: (4.034,7.260,4.604)
C4: (2.298,3.971,8.970)
O5': (6.128,6.832,5.979)
C3': (7.574,4.968,7.534)
C1': (6.251,5.248,9.471)
O4': (6.422,6.511,8.842)
C5': (7.234,7.329,6.724)
P: (5.384,7.780,4.942)
O2: (5.098,3.163,10.795)
C4': (7.517,6.435,7.897)
C2': (7.298,4.300,8.867)
O2': (8.480,4.235,9.646)
N1: (4.848,4.819,9.276)
N3: (3.081,3.331,9.836)
N4: (1.044,3.528,8.816)
C6: (4.033,5.474,8.402)
C5: (2.763,5.091,8.221)
O3': (8.853,4.628,7.041)
OP1: (6.359,8.075,3.863)
OP2: (4.034,7.260,4.604)
C4: (2.298,3.971,8.970)
O5': (6.128,6.832,5.979)
C3': (7.574,4.968,7.534)
C1': (6.251,5.248,9.471)
O4': (6.422,6.511,8.842)
C5': (7.234,7.329,6.724)
P: (5.384,7.780,4.942)
O2: (5.098,3.163,10.795)
C4': (7.517,6.435,7.897)
C2': (7.298,4.300,8.867)
O2': (8.480,4.235,9.646)
N1: (4.848,4.819,9.276)
N3: (3.081,3.331,9.836)
N4: (1.044,3.528,8.816)
C6: (4.033,5.474,8.402)
C5: (2.763,5.091,8.221)
O3': (8.853,4.628,7.041)
OP1: (3.085,12.659,2.598)
OP2: (0.871,11.419,2.544)
C3': (3.842,9.444,6.222)
C1': (2.494,9.845,8.126)
C5': (3.552,11.786,5.281)
O4': (2.670,11.068,7.434)
C8: (0.281,9.806,6.876)
O2': (4.670,8.782,8.428)
C6: (-1.556,7.215,8.341)
C5: (-0.714,8.218,7.870)
C4: (0.503,8.363,8.504)
P: (1.905,12.143,3.314)
C4': (3.767,10.929,6.499)
C2': (3.536,8.855,7.590)
C2: (0.091,6.713,9.891)
N1: (-1.116,6.453,9.372)
N3: (0.973,7.642,9.534)
N6: (-2.768,6.978,7.832)
N7: (-0.844,9.135,6.840)
N9: (1.146,9.376,7.846)
O5': (2.552,11.227,4.431)
O3': (5.142,9.123,5.776)
OP2: (0.871,11.419,2.544)
C3': (3.842,9.444,6.222)
C1': (2.494,9.845,8.126)
C5': (3.552,11.786,5.281)
O4': (2.670,11.068,7.434)
C8: (0.281,9.806,6.876)
O2': (4.670,8.782,8.428)
C6: (-1.556,7.215,8.341)
C5: (-0.714,8.218,7.870)
C4: (0.503,8.363,8.504)
P: (1.905,12.143,3.314)
C4': (3.767,10.929,6.499)
C2': (3.536,8.855,7.590)
C2: (0.091,6.713,9.891)
N1: (-1.116,6.453,9.372)
N3: (0.973,7.642,9.534)
N6: (-2.768,6.978,7.832)
N7: (-0.844,9.135,6.840)
N9: (1.146,9.376,7.846)
O5': (2.552,11.227,4.431)
O3': (5.142,9.123,5.776)
Image (generated by PyMOL):