Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2105:A2104
Extra
PDB:
ATOM 1 O3' A A2104 116.817 108.073 39.570 1.00 76.16 O
ATOM 2 P C A2105 116.074 106.944 40.451 1.00 76.47 P
ATOM 3 OP1 C A2105 116.927 105.712 40.541 1.00 75.93 O
ATOM 4 OP2 C A2105 114.703 106.827 39.892 1.00 74.88 O
ATOM 5 O5' C A2105 115.962 107.644 41.893 1.00 74.76 O
ATOM 6 C5' C A2105 116.877 107.314 42.983 1.00 71.49 C
ATOM 7 C4' C A2105 117.333 108.561 43.749 1.00 68.47 C
ATOM 8 O4' C A2105 118.080 109.438 42.874 1.00 67.09 O
ATOM 9 C3' C A2105 116.325 109.521 44.380 1.00 67.00 C
ATOM 10 O3' C A2105 115.790 109.080 45.617 1.00 66.35 O
ATOM 11 C2' C A2105 117.193 110.738 44.661 1.00 66.18 C
ATOM 12 O2' C A2105 118.001 110.649 45.818 1.00 67.55 O
ATOM 13 C1' C A2105 118.095 110.742 43.435 1.00 65.83 C
ATOM 14 N1 C A2105 117.582 111.695 42.459 1.00 65.07 N
ATOM 15 C2 C A2105 117.772 113.066 42.704 1.00 64.75 C
ATOM 16 O2 C A2105 118.320 113.421 43.764 1.00 62.68 O
ATOM 17 N3 C A2105 117.342 113.960 41.793 1.00 64.84 N
ATOM 18 C4 C A2105 116.730 113.536 40.685 1.00 65.68 C
ATOM 19 N4 C A2105 116.340 114.454 39.800 1.00 65.21 N
ATOM 20 C5 C A2105 116.495 112.148 40.431 1.00 65.60 C
ATOM 21 C6 C A2105 116.935 111.274 41.334 1.00 65.28 C
ATOM 22 P A A2106 114.289 109.482 46.024 1.00 64.85 P
ATOM 23 OP1 A A2106 114.042 108.964 47.391 1.00 65.16 O
ATOM 24 OP2 A A2106 113.411 109.049 44.903 1.00 65.07 O
ATOM 25 O5' A A2106 114.317 111.066 46.121 1.00 62.27 O
TER
ATOM 1 O3' G B2103 121.055 111.354 41.497 1.00 79.90 O
ATOM 2 P A B2104 121.818 109.957 41.324 1.00 79.97 P
ATOM 3 OP1 A B2104 121.320 108.993 42.346 1.00 79.25 O
ATOM 4 OP2 A B2104 123.265 110.272 41.252 1.00 81.89 O
ATOM 5 O5' A B2104 121.386 109.443 39.884 1.00 78.28 O
ATOM 6 C5' A B2104 120.499 108.336 39.740 1.00 76.28 C
ATOM 7 C4' A B2104 119.094 108.839 39.640 1.00 74.78 C
ATOM 8 O4' A B2104 119.087 109.994 38.755 1.00 73.87 O
ATOM 9 C3' A B2104 118.116 107.837 39.047 1.00 75.07 C
ATOM 10 O3' A B2104 116.817 108.073 39.570 1.00 76.16 O
ATOM 11 C2' A B2104 118.133 108.220 37.572 1.00 74.46 C
ATOM 12 O2' A B2104 116.964 107.833 36.890 1.00 74.23 O
ATOM 13 C1' A B2104 118.228 109.745 37.663 1.00 73.70 C
ATOM 14 N9 A B2104 118.771 110.405 36.474 1.00 73.23 N
ATOM 15 C8 A B2104 120.069 110.774 36.196 1.00 73.51 C
ATOM 16 N7 A B2104 120.226 111.284 34.997 1.00 73.25 N
ATOM 17 C5 A B2104 118.946 111.269 34.458 1.00 72.60 C
ATOM 18 C6 A B2104 118.442 111.653 33.209 1.00 72.01 C
ATOM 19 N6 A B2104 119.200 112.133 32.220 1.00 72.73 N
ATOM 20 N1 A B2104 117.115 111.513 32.999 1.00 71.09 N
ATOM 21 C2 A B2104 116.358 111.005 33.977 1.00 70.71 C
ATOM 22 N3 A B2104 116.717 110.593 35.186 1.00 71.69 N
ATOM 23 C4 A B2104 118.039 110.753 35.365 1.00 72.75 C
ATOM 24 P C B2105 116.074 106.944 40.451 1.00 76.47 P
ATOM 25 OP1 C B2105 116.927 105.712 40.541 1.00 75.93 O
ATOM 26 OP2 C B2105 114.703 106.827 39.892 1.00 74.88 O
ATOM 27 O5' C B2105 115.962 107.644 41.893 1.00 74.76 O
TER
ATOM 2 P C A2105 116.074 106.944 40.451 1.00 76.47 P
ATOM 3 OP1 C A2105 116.927 105.712 40.541 1.00 75.93 O
ATOM 4 OP2 C A2105 114.703 106.827 39.892 1.00 74.88 O
ATOM 5 O5' C A2105 115.962 107.644 41.893 1.00 74.76 O
ATOM 6 C5' C A2105 116.877 107.314 42.983 1.00 71.49 C
ATOM 7 C4' C A2105 117.333 108.561 43.749 1.00 68.47 C
ATOM 8 O4' C A2105 118.080 109.438 42.874 1.00 67.09 O
ATOM 9 C3' C A2105 116.325 109.521 44.380 1.00 67.00 C
ATOM 10 O3' C A2105 115.790 109.080 45.617 1.00 66.35 O
ATOM 11 C2' C A2105 117.193 110.738 44.661 1.00 66.18 C
ATOM 12 O2' C A2105 118.001 110.649 45.818 1.00 67.55 O
ATOM 13 C1' C A2105 118.095 110.742 43.435 1.00 65.83 C
ATOM 14 N1 C A2105 117.582 111.695 42.459 1.00 65.07 N
ATOM 15 C2 C A2105 117.772 113.066 42.704 1.00 64.75 C
ATOM 16 O2 C A2105 118.320 113.421 43.764 1.00 62.68 O
ATOM 17 N3 C A2105 117.342 113.960 41.793 1.00 64.84 N
ATOM 18 C4 C A2105 116.730 113.536 40.685 1.00 65.68 C
ATOM 19 N4 C A2105 116.340 114.454 39.800 1.00 65.21 N
ATOM 20 C5 C A2105 116.495 112.148 40.431 1.00 65.60 C
ATOM 21 C6 C A2105 116.935 111.274 41.334 1.00 65.28 C
ATOM 22 P A A2106 114.289 109.482 46.024 1.00 64.85 P
ATOM 23 OP1 A A2106 114.042 108.964 47.391 1.00 65.16 O
ATOM 24 OP2 A A2106 113.411 109.049 44.903 1.00 65.07 O
ATOM 25 O5' A A2106 114.317 111.066 46.121 1.00 62.27 O
TER
ATOM 1 O3' G B2103 121.055 111.354 41.497 1.00 79.90 O
ATOM 2 P A B2104 121.818 109.957 41.324 1.00 79.97 P
ATOM 3 OP1 A B2104 121.320 108.993 42.346 1.00 79.25 O
ATOM 4 OP2 A B2104 123.265 110.272 41.252 1.00 81.89 O
ATOM 5 O5' A B2104 121.386 109.443 39.884 1.00 78.28 O
ATOM 6 C5' A B2104 120.499 108.336 39.740 1.00 76.28 C
ATOM 7 C4' A B2104 119.094 108.839 39.640 1.00 74.78 C
ATOM 8 O4' A B2104 119.087 109.994 38.755 1.00 73.87 O
ATOM 9 C3' A B2104 118.116 107.837 39.047 1.00 75.07 C
ATOM 10 O3' A B2104 116.817 108.073 39.570 1.00 76.16 O
ATOM 11 C2' A B2104 118.133 108.220 37.572 1.00 74.46 C
ATOM 12 O2' A B2104 116.964 107.833 36.890 1.00 74.23 O
ATOM 13 C1' A B2104 118.228 109.745 37.663 1.00 73.70 C
ATOM 14 N9 A B2104 118.771 110.405 36.474 1.00 73.23 N
ATOM 15 C8 A B2104 120.069 110.774 36.196 1.00 73.51 C
ATOM 16 N7 A B2104 120.226 111.284 34.997 1.00 73.25 N
ATOM 17 C5 A B2104 118.946 111.269 34.458 1.00 72.60 C
ATOM 18 C6 A B2104 118.442 111.653 33.209 1.00 72.01 C
ATOM 19 N6 A B2104 119.200 112.133 32.220 1.00 72.73 N
ATOM 20 N1 A B2104 117.115 111.513 32.999 1.00 71.09 N
ATOM 21 C2 A B2104 116.358 111.005 33.977 1.00 70.71 C
ATOM 22 N3 A B2104 116.717 110.593 35.186 1.00 71.69 N
ATOM 23 C4 A B2104 118.039 110.753 35.365 1.00 72.75 C
ATOM 24 P C B2105 116.074 106.944 40.451 1.00 76.47 P
ATOM 25 OP1 C B2105 116.927 105.712 40.541 1.00 75.93 O
ATOM 26 OP2 C B2105 114.703 106.827 39.892 1.00 74.88 O
ATOM 27 O5' C B2105 115.962 107.644 41.893 1.00 74.76 O
TER
Atoms:
C2: (117.772,113.066,42.704)
OP1: (116.927,105.712,40.541)
OP2: (114.703,106.827,39.892)
C4: (116.730,113.536,40.685)
O5': (115.962,107.644,41.893)
C3': (116.325,109.521,44.380)
C1': (118.095,110.742,43.435)
O4': (118.080,109.438,42.874)
C5': (116.877,107.314,42.983)
P: (116.074,106.944,40.451)
O2: (118.320,113.421,43.764)
C4': (117.333,108.561,43.749)
C2': (117.193,110.738,44.661)
O2': (118.001,110.649,45.818)
N1: (117.582,111.695,42.459)
N3: (117.342,113.960,41.793)
N4: (116.340,114.454,39.800)
C6: (116.935,111.274,41.334)
C5: (116.495,112.148,40.431)
O3': (115.790,109.080,45.617)
OP1: (116.927,105.712,40.541)
OP2: (114.703,106.827,39.892)
C4: (116.730,113.536,40.685)
O5': (115.962,107.644,41.893)
C3': (116.325,109.521,44.380)
C1': (118.095,110.742,43.435)
O4': (118.080,109.438,42.874)
C5': (116.877,107.314,42.983)
P: (116.074,106.944,40.451)
O2: (118.320,113.421,43.764)
C4': (117.333,108.561,43.749)
C2': (117.193,110.738,44.661)
O2': (118.001,110.649,45.818)
N1: (117.582,111.695,42.459)
N3: (117.342,113.960,41.793)
N4: (116.340,114.454,39.800)
C6: (116.935,111.274,41.334)
C5: (116.495,112.148,40.431)
O3': (115.790,109.080,45.617)
OP1: (121.320,108.993,42.346)
OP2: (123.265,110.272,41.252)
C3': (118.116,107.837,39.047)
C1': (118.228,109.745,37.663)
C5': (120.499,108.336,39.740)
O4': (119.087,109.994,38.755)
C8: (120.069,110.774,36.196)
O2': (116.964,107.833,36.890)
C6: (118.442,111.653,33.209)
C5: (118.946,111.269,34.458)
C4: (118.039,110.753,35.365)
P: (121.818,109.957,41.324)
C4': (119.094,108.839,39.640)
C2': (118.133,108.220,37.572)
C2: (116.358,111.005,33.977)
N1: (117.115,111.513,32.999)
N3: (116.717,110.593,35.186)
N6: (119.200,112.133,32.220)
N7: (120.226,111.284,34.997)
N9: (118.771,110.405,36.474)
O5': (121.386,109.443,39.884)
O3': (116.817,108.073,39.570)
OP2: (123.265,110.272,41.252)
C3': (118.116,107.837,39.047)
C1': (118.228,109.745,37.663)
C5': (120.499,108.336,39.740)
O4': (119.087,109.994,38.755)
C8: (120.069,110.774,36.196)
O2': (116.964,107.833,36.890)
C6: (118.442,111.653,33.209)
C5: (118.946,111.269,34.458)
C4: (118.039,110.753,35.365)
P: (121.818,109.957,41.324)
C4': (119.094,108.839,39.640)
C2': (118.133,108.220,37.572)
C2: (116.358,111.005,33.977)
N1: (117.115,111.513,32.999)
N3: (116.717,110.593,35.186)
N6: (119.200,112.133,32.220)
N7: (120.226,111.284,34.997)
N9: (118.771,110.405,36.474)
O5': (121.386,109.443,39.884)
O3': (116.817,108.073,39.570)
Image (generated by PyMOL):