Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:B15:B14
Extra
PDB:
ATOM 1 O3' A A 14 101.350 23.467 29.166 1.00127.80 O
ATOM 2 P C A 15 100.065 22.506 29.249 1.00132.15 P
ATOM 3 OP1 C A 15 98.882 23.243 28.736 1.00132.81 O
ATOM 4 OP2 C A 15 100.038 21.939 30.623 1.00131.16 O
ATOM 5 O5' C A 15 100.406 21.323 28.237 1.00125.82 O
ATOM 6 C5' C A 15 100.436 21.554 26.832 1.00121.50 C
ATOM 7 C4' C A 15 100.851 20.300 26.099 1.00120.10 C
ATOM 8 O4' C A 15 102.228 19.971 26.423 1.00116.22 O
ATOM 9 C3' C A 15 100.087 19.040 26.460 1.00122.03 C
ATOM 10 O3' C A 15 98.844 18.973 25.774 1.00126.30 O
ATOM 11 C2' C A 15 101.051 17.949 26.013 1.00117.92 C
ATOM 12 O2' C A 15 101.020 17.725 24.619 1.00119.35 O
ATOM 13 C1' C A 15 102.398 18.562 26.405 1.00112.26 C
ATOM 14 N1 C A 15 102.849 18.131 27.738 1.00108.26 N
ATOM 15 C2 C A 15 103.436 16.867 27.876 1.00106.79 C
ATOM 16 O2 C A 15 103.564 16.150 26.870 1.00106.38 O
ATOM 17 N3 C A 15 103.847 16.460 29.099 1.00105.78 N
ATOM 18 C4 C A 15 103.690 17.262 30.157 1.00105.64 C
ATOM 19 N4 C A 15 104.108 16.819 31.345 1.00105.02 N
ATOM 20 C5 C A 15 103.098 18.554 30.042 1.00105.28 C
ATOM 21 C6 C A 15 102.696 18.944 28.826 1.00106.24 C
ATOM 22 P C A 16 97.627 18.148 26.420 1.00130.10 P
ATOM 23 OP1 C A 16 96.372 18.568 25.745 1.00126.99 O
ATOM 24 OP2 C A 16 97.745 18.276 27.895 1.00129.49 O
ATOM 25 O5' C A 16 97.941 16.636 26.021 1.00126.01 O
TER
ATOM 1 O3' A B 13 102.760 22.349 34.631 1.00109.72 O
ATOM 2 P A B 14 104.265 22.859 34.408 1.00116.68 P
ATOM 3 OP1 A B 14 105.165 21.679 34.454 1.00120.36 O
ATOM 4 OP2 A B 14 104.504 24.002 35.326 1.00120.71 O
ATOM 5 O5' A B 14 104.242 23.404 32.914 1.00116.06 O
ATOM 6 C5' A B 14 103.373 22.819 31.955 1.00113.66 C
ATOM 7 C4' A B 14 103.463 23.561 30.650 1.00116.82 C
ATOM 8 O4' A B 14 104.830 23.460 30.171 1.00113.82 O
ATOM 9 C3' A B 14 102.616 22.956 29.549 1.00120.67 C
ATOM 10 O3' A B 14 101.350 23.467 29.166 1.00127.80 O
ATOM 11 C2' A B 14 103.512 22.085 28.686 1.00117.93 C
ATOM 12 O2' A B 14 103.326 22.324 27.307 1.00120.77 O
ATOM 13 C1' A B 14 104.912 22.565 29.070 1.00111.69 C
ATOM 14 N9 A B 14 105.704 21.411 29.490 1.00107.81 N
ATOM 15 C8 A B 14 106.290 21.176 30.709 1.00106.62 C
ATOM 16 N7 A B 14 106.893 20.015 30.789 1.00105.73 N
ATOM 17 C5 A B 14 106.702 19.452 29.534 1.00105.13 C
ATOM 18 C6 A B 14 107.098 18.222 28.975 1.00104.35 C
ATOM 19 N6 A B 14 107.800 17.299 29.636 1.00104.47 N
ATOM 20 N1 A B 14 106.743 17.970 27.696 1.00102.81 N
ATOM 21 C2 A B 14 106.041 18.895 27.033 1.00103.22 C
ATOM 22 N3 A B 14 105.610 20.085 27.448 1.00104.71 N
ATOM 23 C4 A B 14 105.979 20.305 28.722 1.00105.87 C
ATOM 24 P C B 15 100.065 22.506 29.249 1.00132.15 P
ATOM 25 OP1 C B 15 98.882 23.243 28.736 1.00132.81 O
ATOM 26 OP2 C B 15 100.038 21.939 30.623 1.00131.16 O
ATOM 27 O5' C B 15 100.406 21.323 28.237 1.00125.82 O
TER
ATOM 2 P C A 15 100.065 22.506 29.249 1.00132.15 P
ATOM 3 OP1 C A 15 98.882 23.243 28.736 1.00132.81 O
ATOM 4 OP2 C A 15 100.038 21.939 30.623 1.00131.16 O
ATOM 5 O5' C A 15 100.406 21.323 28.237 1.00125.82 O
ATOM 6 C5' C A 15 100.436 21.554 26.832 1.00121.50 C
ATOM 7 C4' C A 15 100.851 20.300 26.099 1.00120.10 C
ATOM 8 O4' C A 15 102.228 19.971 26.423 1.00116.22 O
ATOM 9 C3' C A 15 100.087 19.040 26.460 1.00122.03 C
ATOM 10 O3' C A 15 98.844 18.973 25.774 1.00126.30 O
ATOM 11 C2' C A 15 101.051 17.949 26.013 1.00117.92 C
ATOM 12 O2' C A 15 101.020 17.725 24.619 1.00119.35 O
ATOM 13 C1' C A 15 102.398 18.562 26.405 1.00112.26 C
ATOM 14 N1 C A 15 102.849 18.131 27.738 1.00108.26 N
ATOM 15 C2 C A 15 103.436 16.867 27.876 1.00106.79 C
ATOM 16 O2 C A 15 103.564 16.150 26.870 1.00106.38 O
ATOM 17 N3 C A 15 103.847 16.460 29.099 1.00105.78 N
ATOM 18 C4 C A 15 103.690 17.262 30.157 1.00105.64 C
ATOM 19 N4 C A 15 104.108 16.819 31.345 1.00105.02 N
ATOM 20 C5 C A 15 103.098 18.554 30.042 1.00105.28 C
ATOM 21 C6 C A 15 102.696 18.944 28.826 1.00106.24 C
ATOM 22 P C A 16 97.627 18.148 26.420 1.00130.10 P
ATOM 23 OP1 C A 16 96.372 18.568 25.745 1.00126.99 O
ATOM 24 OP2 C A 16 97.745 18.276 27.895 1.00129.49 O
ATOM 25 O5' C A 16 97.941 16.636 26.021 1.00126.01 O
TER
ATOM 1 O3' A B 13 102.760 22.349 34.631 1.00109.72 O
ATOM 2 P A B 14 104.265 22.859 34.408 1.00116.68 P
ATOM 3 OP1 A B 14 105.165 21.679 34.454 1.00120.36 O
ATOM 4 OP2 A B 14 104.504 24.002 35.326 1.00120.71 O
ATOM 5 O5' A B 14 104.242 23.404 32.914 1.00116.06 O
ATOM 6 C5' A B 14 103.373 22.819 31.955 1.00113.66 C
ATOM 7 C4' A B 14 103.463 23.561 30.650 1.00116.82 C
ATOM 8 O4' A B 14 104.830 23.460 30.171 1.00113.82 O
ATOM 9 C3' A B 14 102.616 22.956 29.549 1.00120.67 C
ATOM 10 O3' A B 14 101.350 23.467 29.166 1.00127.80 O
ATOM 11 C2' A B 14 103.512 22.085 28.686 1.00117.93 C
ATOM 12 O2' A B 14 103.326 22.324 27.307 1.00120.77 O
ATOM 13 C1' A B 14 104.912 22.565 29.070 1.00111.69 C
ATOM 14 N9 A B 14 105.704 21.411 29.490 1.00107.81 N
ATOM 15 C8 A B 14 106.290 21.176 30.709 1.00106.62 C
ATOM 16 N7 A B 14 106.893 20.015 30.789 1.00105.73 N
ATOM 17 C5 A B 14 106.702 19.452 29.534 1.00105.13 C
ATOM 18 C6 A B 14 107.098 18.222 28.975 1.00104.35 C
ATOM 19 N6 A B 14 107.800 17.299 29.636 1.00104.47 N
ATOM 20 N1 A B 14 106.743 17.970 27.696 1.00102.81 N
ATOM 21 C2 A B 14 106.041 18.895 27.033 1.00103.22 C
ATOM 22 N3 A B 14 105.610 20.085 27.448 1.00104.71 N
ATOM 23 C4 A B 14 105.979 20.305 28.722 1.00105.87 C
ATOM 24 P C B 15 100.065 22.506 29.249 1.00132.15 P
ATOM 25 OP1 C B 15 98.882 23.243 28.736 1.00132.81 O
ATOM 26 OP2 C B 15 100.038 21.939 30.623 1.00131.16 O
ATOM 27 O5' C B 15 100.406 21.323 28.237 1.00125.82 O
TER
Atoms:
C2: (103.436,16.867,27.876)
OP1: (98.882,23.243,28.736)
OP2: (100.038,21.939,30.623)
C4: (103.690,17.262,30.157)
O5': (100.406,21.323,28.237)
C3': (100.087,19.040,26.460)
C1': (102.398,18.562,26.405)
O4': (102.228,19.971,26.423)
C5': (100.436,21.554,26.832)
P: (100.065,22.506,29.249)
O2: (103.564,16.150,26.870)
C4': (100.851,20.300,26.099)
C2': (101.051,17.949,26.013)
O2': (101.020,17.725,24.619)
N1: (102.849,18.131,27.738)
N3: (103.847,16.460,29.099)
N4: (104.108,16.819,31.345)
C6: (102.696,18.944,28.826)
C5: (103.098,18.554,30.042)
O3': (98.844,18.973,25.774)
OP1: (98.882,23.243,28.736)
OP2: (100.038,21.939,30.623)
C4: (103.690,17.262,30.157)
O5': (100.406,21.323,28.237)
C3': (100.087,19.040,26.460)
C1': (102.398,18.562,26.405)
O4': (102.228,19.971,26.423)
C5': (100.436,21.554,26.832)
P: (100.065,22.506,29.249)
O2: (103.564,16.150,26.870)
C4': (100.851,20.300,26.099)
C2': (101.051,17.949,26.013)
O2': (101.020,17.725,24.619)
N1: (102.849,18.131,27.738)
N3: (103.847,16.460,29.099)
N4: (104.108,16.819,31.345)
C6: (102.696,18.944,28.826)
C5: (103.098,18.554,30.042)
O3': (98.844,18.973,25.774)
OP1: (105.165,21.679,34.454)
OP2: (104.504,24.002,35.326)
C3': (102.616,22.956,29.549)
C1': (104.912,22.565,29.070)
C5': (103.373,22.819,31.955)
O4': (104.830,23.460,30.171)
C8: (106.290,21.176,30.709)
O2': (103.326,22.324,27.307)
C6: (107.098,18.222,28.975)
C5: (106.702,19.452,29.534)
C4: (105.979,20.305,28.722)
P: (104.265,22.859,34.408)
C4': (103.463,23.561,30.650)
C2': (103.512,22.085,28.686)
C2: (106.041,18.895,27.033)
N1: (106.743,17.970,27.696)
N3: (105.610,20.085,27.448)
N6: (107.800,17.299,29.636)
N7: (106.893,20.015,30.789)
N9: (105.704,21.411,29.490)
O5': (104.242,23.404,32.914)
O3': (101.350,23.467,29.166)
OP2: (104.504,24.002,35.326)
C3': (102.616,22.956,29.549)
C1': (104.912,22.565,29.070)
C5': (103.373,22.819,31.955)
O4': (104.830,23.460,30.171)
C8: (106.290,21.176,30.709)
O2': (103.326,22.324,27.307)
C6: (107.098,18.222,28.975)
C5: (106.702,19.452,29.534)
C4: (105.979,20.305,28.722)
P: (104.265,22.859,34.408)
C4': (103.463,23.561,30.650)
C2': (103.512,22.085,28.686)
C2: (106.041,18.895,27.033)
N1: (106.743,17.970,27.696)
N3: (105.610,20.085,27.448)
N6: (107.800,17.299,29.636)
N7: (106.893,20.015,30.789)
N9: (105.704,21.411,29.490)
O5': (104.242,23.404,32.914)
O3': (101.350,23.467,29.166)
Image (generated by PyMOL):