ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1RPU:D11:D10

Extra

PDB:
ATOM 1 O3' A A 10 -9.075 35.927 62.024 0.60 28.29 O
ATOM 2 P C A 11 -7.914 35.629 60.946 0.60 29.50 P
ATOM 3 OP1 C A 11 -8.016 36.685 59.906 0.60 30.52 O
ATOM 4 OP2 C A 11 -7.966 34.197 60.549 0.60 28.73 O
ATOM 5 O5' C A 11 -6.556 35.848 61.746 0.60 28.97 O
ATOM 6 C5' C A 11 -6.115 37.153 62.085 0.60 28.50 C
ATOM 7 C4' C A 11 -4.758 37.086 62.732 0.60 28.46 C
ATOM 8 O4' C A 11 -4.848 36.270 63.930 0.60 30.30 O
ATOM 9 C3' C A 11 -3.678 36.403 61.915 0.60 28.79 C
ATOM 10 O3' C A 11 -3.082 37.307 60.992 0.60 29.79 O
ATOM 11 C2' C A 11 -2.697 35.991 62.998 0.60 27.89 C
ATOM 12 O2' C A 11 -1.994 37.115 63.470 0.60 29.27 O
ATOM 13 C1' C A 11 -3.650 35.525 64.096 0.60 29.11 C
ATOM 14 N1 C A 11 -3.976 34.088 64.019 0.60 28.55 N
ATOM 15 C2 C A 11 -3.069 33.166 64.533 0.60 28.36 C
ATOM 16 O2 C A 11 -2.018 33.574 65.028 0.60 29.94 O
ATOM 17 N3 C A 11 -3.357 31.848 64.473 0.60 30.52 N
ATOM 18 C4 C A 11 -4.499 31.439 63.919 0.60 29.87 C
ATOM 19 N4 C A 11 -4.739 30.125 63.884 0.60 28.02 N
ATOM 20 C5 C A 11 -5.443 32.358 63.379 0.60 28.28 C
ATOM 21 C6 C A 11 -5.146 33.662 63.452 0.60 27.81 C
ATOM 22 P G A 12 -2.169 36.737 59.803 0.60 29.56 P
ATOM 23 OP1 G A 12 -1.766 37.885 58.953 0.60 29.83 O
ATOM 24 OP2 G A 12 -2.866 35.584 59.186 0.60 32.09 O
ATOM 25 O5' G A 12 -0.885 36.170 60.549 0.60 29.57 O
TER

ATOM 1 O3' C B 9 -14.650 33.444 63.725 0.60 28.05 O
ATOM 2 P A B 10 -13.725 33.334 62.423 0.60 24.64 P
ATOM 3 OP1 A B 10 -14.260 34.318 61.468 0.60 24.61 O
ATOM 4 OP2 A B 10 -13.638 31.903 62.038 0.60 27.07 O
ATOM 5 O5' A B 10 -12.281 33.791 62.920 0.60 27.28 O
ATOM 6 C5' A B 10 -12.021 35.150 63.226 0.60 28.31 C
ATOM 7 C4' A B 10 -10.633 35.327 63.805 0.60 29.85 C
ATOM 8 O4' A B 10 -10.479 34.499 64.984 0.60 31.81 O
ATOM 9 C3' A B 10 -9.413 34.938 62.984 0.60 28.89 C
ATOM 10 O3' A B 10 -9.075 35.927 62.024 0.60 28.29 O
ATOM 11 C2' A B 10 -8.342 34.940 64.062 0.60 30.92 C
ATOM 12 O2' A B 10 -7.999 36.267 64.412 0.60 31.85 O
ATOM 13 C1' A B 10 -9.094 34.311 65.236 0.60 31.82 C
ATOM 14 N9 A B 10 -8.814 32.884 65.380 0.60 32.76 N
ATOM 15 C8 A B 10 -9.558 31.803 64.972 0.60 32.92 C
ATOM 16 N7 A B 10 -9.009 30.646 65.261 0.60 32.66 N
ATOM 17 C5 A B 10 -7.829 30.991 65.906 0.60 32.90 C
ATOM 18 C6 A B 10 -6.799 30.222 66.470 0.60 34.03 C
ATOM 19 N6 A B 10 -6.797 28.887 66.493 0.60 34.07 N
ATOM 20 N1 A B 10 -5.754 30.879 67.021 0.60 34.45 N
ATOM 21 C2 A B 10 -5.760 32.213 67.008 0.60 33.35 C
ATOM 22 N3 A B 10 -6.672 33.045 66.520 0.60 32.83 N
ATOM 23 C4 A B 10 -7.693 32.362 65.978 0.60 32.47 C
ATOM 24 P C B 11 -7.914 35.629 60.946 0.60 29.50 P
ATOM 25 OP1 C B 11 -8.016 36.685 59.906 0.60 30.52 O
ATOM 26 OP2 C B 11 -7.966 34.197 60.549 0.60 28.73 O
ATOM 27 O5' C B 11 -6.556 35.848 61.746 0.60 28.97 O
TER

Atoms:
C2: (-3.069,33.166,64.533)
OP1: (-8.016,36.685,59.906)
OP2: (-7.966,34.197,60.549)
C4: (-4.499,31.439,63.919)
O5': (-6.556,35.848,61.746)
C3': (-3.678,36.403,61.915)
C1': (-3.650,35.525,64.096)
O4': (-4.848,36.270,63.930)
C5': (-6.115,37.153,62.085)
P: (-7.914,35.629,60.946)
O2: (-2.018,33.574,65.028)
C4': (-4.758,37.086,62.732)
C2': (-2.697,35.991,62.998)
O2': (-1.994,37.115,63.470)
N1: (-3.976,34.088,64.019)
N3: (-3.357,31.848,64.473)
N4: (-4.739,30.125,63.884)
C6: (-5.146,33.662,63.452)
C5: (-5.443,32.358,63.379)
O3': (-3.082,37.307,60.992)
OP1: (-14.260,34.318,61.468)
OP2: (-13.638,31.903,62.038)
C3': (-9.413,34.938,62.984)
C1': (-9.094,34.311,65.236)
C5': (-12.021,35.150,63.226)
O4': (-10.479,34.499,64.984)
C8: (-9.558,31.803,64.972)
O2': (-7.999,36.267,64.412)
C6: (-6.799,30.222,66.470)
C5: (-7.829,30.991,65.906)
C4: (-7.693,32.362,65.978)
P: (-13.725,33.334,62.423)
C4': (-10.633,35.327,63.805)
C2': (-8.342,34.940,64.062)
C2: (-5.760,32.213,67.008)
N1: (-5.754,30.879,67.021)
N3: (-6.672,33.045,66.520)
N6: (-6.797,28.887,66.493)
N7: (-9.009,30.646,65.261)
N9: (-8.814,32.884,65.380)
O5': (-12.281,33.791,62.920)
O3': (-9.075,35.927,62.024)
Image (generated by PyMOL):
PyMOL image
show in jmol