Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01221:01220
Extra
PDB:
ATOM 1 O3' A A1220 18.727 91.991 98.565 1.00 32.57 O
ATOM 2 P C A1221 17.733 91.542 97.390 1.00 32.67 P
ATOM 3 OP1 C A1221 18.415 90.466 96.623 1.00 30.37 O
ATOM 4 OP2 C A1221 17.258 92.748 96.685 1.00 34.45 O
ATOM 5 O5' C A1221 16.491 90.917 98.160 1.00 34.93 O
ATOM 6 C5' C A1221 16.650 89.804 99.064 1.00 34.65 C
ATOM 7 C4' C A1221 15.528 89.800 100.076 1.00 36.15 C
ATOM 8 O4' C A1221 15.695 90.900 101.012 1.00 36.79 O
ATOM 9 C3' C A1221 14.146 90.044 99.496 1.00 37.10 C
ATOM 10 O3' C A1221 13.598 88.889 98.883 1.00 38.12 O
ATOM 11 C2' C A1221 13.378 90.521 100.715 1.00 38.36 C
ATOM 12 O2' C A1221 13.092 89.467 101.611 1.00 38.89 O
ATOM 13 C1' C A1221 14.422 91.422 101.368 1.00 37.62 C
ATOM 14 N1 C A1221 14.343 92.830 100.923 1.00 39.03 N
ATOM 15 C2 C A1221 13.321 93.646 101.434 1.00 39.36 C
ATOM 16 O2 C A1221 12.466 93.149 102.169 1.00 40.94 O
ATOM 17 N3 C A1221 13.289 94.954 101.102 1.00 39.88 N
ATOM 18 C4 C A1221 14.204 95.455 100.271 1.00 39.68 C
ATOM 19 N4 C A1221 14.142 96.760 99.993 1.00 38.90 N
ATOM 20 C5 C A1221 15.225 94.643 99.695 1.00 39.46 C
ATOM 21 C6 C A1221 15.258 93.348 100.046 1.00 39.99 C
ATOM 22 P C A1222 12.815 89.037 97.487 1.00 39.08 P
ATOM 23 OP1 C A1222 12.822 87.714 96.802 1.00 34.80 O
ATOM 24 OP2 C A1222 13.367 90.225 96.782 1.00 39.61 O
ATOM 25 O5' C A1222 11.333 89.411 97.937 1.00 39.04 O
TER
ATOM 1 O3' G B1219 18.302 98.320 97.366 1.00 31.26 O
ATOM 2 P A B1220 17.436 96.982 97.308 1.00 30.58 P
ATOM 3 OP1 A B1220 17.465 96.438 95.919 1.00 27.82 O
ATOM 4 OP2 A B1220 16.140 97.319 97.932 1.00 31.29 O
ATOM 5 O5' A B1220 18.217 95.980 98.262 1.00 30.03 O
ATOM 6 C5' A B1220 19.317 95.193 97.774 1.00 31.15 C
ATOM 7 C4' A B1220 19.697 94.161 98.804 1.00 32.63 C
ATOM 8 O4' A B1220 20.141 94.840 100.003 1.00 34.58 O
ATOM 9 C3' A B1220 18.552 93.246 99.214 1.00 31.70 C
ATOM 10 O3' A B1220 18.727 91.991 98.565 1.00 32.57 O
ATOM 11 C2' A B1220 18.737 93.094 100.720 1.00 31.62 C
ATOM 12 O2' A B1220 19.697 92.108 101.027 1.00 29.52 O
ATOM 13 C1' A B1220 19.343 94.445 101.095 1.00 33.19 C
ATOM 14 N9 A B1220 18.457 95.564 101.426 1.00 33.79 N
ATOM 15 C8 A B1220 18.662 96.871 101.049 1.00 33.27 C
ATOM 16 N7 A B1220 17.788 97.706 101.540 1.00 34.15 N
ATOM 17 C5 A B1220 16.930 96.901 102.273 1.00 32.99 C
ATOM 18 C6 A B1220 15.797 97.196 103.043 1.00 33.13 C
ATOM 19 N6 A B1220 15.321 98.433 103.213 1.00 33.55 N
ATOM 20 N1 A B1220 15.163 96.171 103.641 1.00 32.49 N
ATOM 21 C2 A B1220 15.650 94.933 103.472 1.00 33.63 C
ATOM 22 N3 A B1220 16.711 94.528 102.777 1.00 32.06 N
ATOM 23 C4 A B1220 17.316 95.574 102.194 1.00 32.97 C
ATOM 24 P C B1221 17.733 91.542 97.390 1.00 32.67 P
ATOM 25 OP1 C B1221 18.415 90.466 96.623 1.00 30.37 O
ATOM 26 OP2 C B1221 17.258 92.748 96.685 1.00 34.45 O
ATOM 27 O5' C B1221 16.491 90.917 98.160 1.00 34.93 O
TER
ATOM 2 P C A1221 17.733 91.542 97.390 1.00 32.67 P
ATOM 3 OP1 C A1221 18.415 90.466 96.623 1.00 30.37 O
ATOM 4 OP2 C A1221 17.258 92.748 96.685 1.00 34.45 O
ATOM 5 O5' C A1221 16.491 90.917 98.160 1.00 34.93 O
ATOM 6 C5' C A1221 16.650 89.804 99.064 1.00 34.65 C
ATOM 7 C4' C A1221 15.528 89.800 100.076 1.00 36.15 C
ATOM 8 O4' C A1221 15.695 90.900 101.012 1.00 36.79 O
ATOM 9 C3' C A1221 14.146 90.044 99.496 1.00 37.10 C
ATOM 10 O3' C A1221 13.598 88.889 98.883 1.00 38.12 O
ATOM 11 C2' C A1221 13.378 90.521 100.715 1.00 38.36 C
ATOM 12 O2' C A1221 13.092 89.467 101.611 1.00 38.89 O
ATOM 13 C1' C A1221 14.422 91.422 101.368 1.00 37.62 C
ATOM 14 N1 C A1221 14.343 92.830 100.923 1.00 39.03 N
ATOM 15 C2 C A1221 13.321 93.646 101.434 1.00 39.36 C
ATOM 16 O2 C A1221 12.466 93.149 102.169 1.00 40.94 O
ATOM 17 N3 C A1221 13.289 94.954 101.102 1.00 39.88 N
ATOM 18 C4 C A1221 14.204 95.455 100.271 1.00 39.68 C
ATOM 19 N4 C A1221 14.142 96.760 99.993 1.00 38.90 N
ATOM 20 C5 C A1221 15.225 94.643 99.695 1.00 39.46 C
ATOM 21 C6 C A1221 15.258 93.348 100.046 1.00 39.99 C
ATOM 22 P C A1222 12.815 89.037 97.487 1.00 39.08 P
ATOM 23 OP1 C A1222 12.822 87.714 96.802 1.00 34.80 O
ATOM 24 OP2 C A1222 13.367 90.225 96.782 1.00 39.61 O
ATOM 25 O5' C A1222 11.333 89.411 97.937 1.00 39.04 O
TER
ATOM 1 O3' G B1219 18.302 98.320 97.366 1.00 31.26 O
ATOM 2 P A B1220 17.436 96.982 97.308 1.00 30.58 P
ATOM 3 OP1 A B1220 17.465 96.438 95.919 1.00 27.82 O
ATOM 4 OP2 A B1220 16.140 97.319 97.932 1.00 31.29 O
ATOM 5 O5' A B1220 18.217 95.980 98.262 1.00 30.03 O
ATOM 6 C5' A B1220 19.317 95.193 97.774 1.00 31.15 C
ATOM 7 C4' A B1220 19.697 94.161 98.804 1.00 32.63 C
ATOM 8 O4' A B1220 20.141 94.840 100.003 1.00 34.58 O
ATOM 9 C3' A B1220 18.552 93.246 99.214 1.00 31.70 C
ATOM 10 O3' A B1220 18.727 91.991 98.565 1.00 32.57 O
ATOM 11 C2' A B1220 18.737 93.094 100.720 1.00 31.62 C
ATOM 12 O2' A B1220 19.697 92.108 101.027 1.00 29.52 O
ATOM 13 C1' A B1220 19.343 94.445 101.095 1.00 33.19 C
ATOM 14 N9 A B1220 18.457 95.564 101.426 1.00 33.79 N
ATOM 15 C8 A B1220 18.662 96.871 101.049 1.00 33.27 C
ATOM 16 N7 A B1220 17.788 97.706 101.540 1.00 34.15 N
ATOM 17 C5 A B1220 16.930 96.901 102.273 1.00 32.99 C
ATOM 18 C6 A B1220 15.797 97.196 103.043 1.00 33.13 C
ATOM 19 N6 A B1220 15.321 98.433 103.213 1.00 33.55 N
ATOM 20 N1 A B1220 15.163 96.171 103.641 1.00 32.49 N
ATOM 21 C2 A B1220 15.650 94.933 103.472 1.00 33.63 C
ATOM 22 N3 A B1220 16.711 94.528 102.777 1.00 32.06 N
ATOM 23 C4 A B1220 17.316 95.574 102.194 1.00 32.97 C
ATOM 24 P C B1221 17.733 91.542 97.390 1.00 32.67 P
ATOM 25 OP1 C B1221 18.415 90.466 96.623 1.00 30.37 O
ATOM 26 OP2 C B1221 17.258 92.748 96.685 1.00 34.45 O
ATOM 27 O5' C B1221 16.491 90.917 98.160 1.00 34.93 O
TER
Atoms:
C2: (13.321,93.646,101.434)
OP1: (18.415,90.466,96.623)
OP2: (17.258,92.748,96.685)
C4: (14.204,95.455,100.271)
O5': (16.491,90.917,98.160)
C3': (14.146,90.044,99.496)
C1': (14.422,91.422,101.368)
O4': (15.695,90.900,101.012)
C5': (16.650,89.804,99.064)
P: (17.733,91.542,97.390)
O2: (12.466,93.149,102.169)
C4': (15.528,89.800,100.076)
C2': (13.378,90.521,100.715)
O2': (13.092,89.467,101.611)
N1: (14.343,92.830,100.923)
N3: (13.289,94.954,101.102)
N4: (14.142,96.760,99.993)
C6: (15.258,93.348,100.046)
C5: (15.225,94.643,99.695)
O3': (13.598,88.889,98.883)
OP1: (18.415,90.466,96.623)
OP2: (17.258,92.748,96.685)
C4: (14.204,95.455,100.271)
O5': (16.491,90.917,98.160)
C3': (14.146,90.044,99.496)
C1': (14.422,91.422,101.368)
O4': (15.695,90.900,101.012)
C5': (16.650,89.804,99.064)
P: (17.733,91.542,97.390)
O2: (12.466,93.149,102.169)
C4': (15.528,89.800,100.076)
C2': (13.378,90.521,100.715)
O2': (13.092,89.467,101.611)
N1: (14.343,92.830,100.923)
N3: (13.289,94.954,101.102)
N4: (14.142,96.760,99.993)
C6: (15.258,93.348,100.046)
C5: (15.225,94.643,99.695)
O3': (13.598,88.889,98.883)
OP1: (17.465,96.438,95.919)
OP2: (16.140,97.319,97.932)
C3': (18.552,93.246,99.214)
C1': (19.343,94.445,101.095)
C5': (19.317,95.193,97.774)
O4': (20.141,94.840,100.003)
C8: (18.662,96.871,101.049)
O2': (19.697,92.108,101.027)
C6: (15.797,97.196,103.043)
C5: (16.930,96.901,102.273)
C4: (17.316,95.574,102.194)
P: (17.436,96.982,97.308)
C4': (19.697,94.161,98.804)
C2': (18.737,93.094,100.720)
C2: (15.650,94.933,103.472)
N1: (15.163,96.171,103.641)
N3: (16.711,94.528,102.777)
N6: (15.321,98.433,103.213)
N7: (17.788,97.706,101.540)
N9: (18.457,95.564,101.426)
O5': (18.217,95.980,98.262)
O3': (18.727,91.991,98.565)
OP2: (16.140,97.319,97.932)
C3': (18.552,93.246,99.214)
C1': (19.343,94.445,101.095)
C5': (19.317,95.193,97.774)
O4': (20.141,94.840,100.003)
C8: (18.662,96.871,101.049)
O2': (19.697,92.108,101.027)
C6: (15.797,97.196,103.043)
C5: (16.930,96.901,102.273)
C4: (17.316,95.574,102.194)
P: (17.436,96.982,97.308)
C4': (19.697,94.161,98.804)
C2': (18.737,93.094,100.720)
C2: (15.650,94.933,103.472)
N1: (15.163,96.171,103.641)
N3: (16.711,94.528,102.777)
N6: (15.321,98.433,103.213)
N7: (17.788,97.706,101.540)
N9: (18.457,95.564,101.426)
O5': (18.217,95.980,98.262)
O3': (18.727,91.991,98.565)
Image (generated by PyMOL):