Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02105:02104
Extra
PDB:
ATOM 1 O3' A A2104 116.812 108.105 39.157 1.00 63.25 O
ATOM 2 P C A2105 116.086 107.021 40.105 1.00 62.66 P
ATOM 3 OP1 C A2105 116.929 105.796 40.196 1.00 61.60 O
ATOM 4 OP2 C A2105 114.680 106.896 39.639 1.00 61.97 O
ATOM 5 O5' C A2105 116.065 107.757 41.523 1.00 60.89 O
ATOM 6 C5' C A2105 116.940 107.343 42.588 1.00 58.84 C
ATOM 7 C4' C A2105 117.440 108.537 43.372 1.00 57.54 C
ATOM 8 O4' C A2105 118.155 109.440 42.489 1.00 56.26 O
ATOM 9 C3' C A2105 116.414 109.458 44.010 1.00 57.41 C
ATOM 10 O3' C A2105 115.865 108.944 45.215 1.00 57.79 O
ATOM 11 C2' C A2105 117.251 110.699 44.291 1.00 56.40 C
ATOM 12 O2' C A2105 118.063 110.581 45.445 1.00 56.24 O
ATOM 13 C1' C A2105 118.130 110.749 43.041 1.00 54.36 C
ATOM 14 N1 C A2105 117.604 111.693 42.041 1.00 51.87 N
ATOM 15 C2 C A2105 117.695 113.066 42.312 1.00 51.82 C
ATOM 16 O2 C A2105 118.209 113.435 43.384 1.00 51.26 O
ATOM 17 N3 C A2105 117.220 113.952 41.407 1.00 51.65 N
ATOM 18 C4 C A2105 116.670 113.516 40.271 1.00 51.72 C
ATOM 19 N4 C A2105 116.218 114.429 39.409 1.00 52.30 N
ATOM 20 C5 C A2105 116.561 112.126 39.969 1.00 50.53 C
ATOM 21 C6 C A2105 117.037 111.258 40.874 1.00 51.28 C
ATOM 22 P A A2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 23 OP1 A A2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 24 OP2 A A2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 25 O5' A A2106 114.413 110.955 45.701 1.00 53.34 O
TER
ATOM 1 O3' G B2103 120.944 111.407 40.920 1.00 70.17 O
ATOM 2 P A B2104 121.788 110.054 40.863 1.00 70.37 P
ATOM 3 OP1 A B2104 121.245 109.148 41.910 1.00 70.89 O
ATOM 4 OP2 A B2104 123.222 110.436 40.894 1.00 71.89 O
ATOM 5 O5' A B2104 121.441 109.461 39.425 1.00 69.20 O
ATOM 6 C5' A B2104 120.533 108.348 39.270 1.00 66.23 C
ATOM 7 C4' A B2104 119.107 108.843 39.173 1.00 63.69 C
ATOM 8 O4' A B2104 119.053 110.002 38.298 1.00 62.41 O
ATOM 9 C3' A B2104 118.106 107.841 38.610 1.00 62.49 C
ATOM 10 O3' A B2104 116.812 108.105 39.157 1.00 63.25 O
ATOM 11 C2' A B2104 118.084 108.229 37.139 1.00 61.66 C
ATOM 12 O2' A B2104 116.908 107.824 36.481 1.00 63.66 O
ATOM 13 C1' A B2104 118.154 109.751 37.242 1.00 61.46 C
ATOM 14 N9 A B2104 118.646 110.415 36.036 1.00 61.53 N
ATOM 15 C8 A B2104 119.925 110.820 35.747 1.00 62.10 C
ATOM 16 N7 A B2104 120.056 111.342 34.553 1.00 62.00 N
ATOM 17 C5 A B2104 118.776 111.286 34.023 1.00 61.61 C
ATOM 18 C6 A B2104 118.253 111.664 32.778 1.00 61.05 C
ATOM 19 N6 A B2104 118.987 112.164 31.788 1.00 62.42 N
ATOM 20 N1 A B2104 116.932 111.494 32.575 1.00 61.54 N
ATOM 21 C2 A B2104 116.198 110.961 33.556 1.00 61.50 C
ATOM 22 N3 A B2104 116.577 110.548 34.760 1.00 61.37 N
ATOM 23 C4 A B2104 117.894 110.738 34.933 1.00 61.57 C
ATOM 24 P C B2105 116.086 107.021 40.105 1.00 62.66 P
ATOM 25 OP1 C B2105 116.929 105.796 40.196 1.00 61.60 O
ATOM 26 OP2 C B2105 114.680 106.896 39.639 1.00 61.97 O
ATOM 27 O5' C B2105 116.065 107.757 41.523 1.00 60.89 O
TER
ATOM 2 P C A2105 116.086 107.021 40.105 1.00 62.66 P
ATOM 3 OP1 C A2105 116.929 105.796 40.196 1.00 61.60 O
ATOM 4 OP2 C A2105 114.680 106.896 39.639 1.00 61.97 O
ATOM 5 O5' C A2105 116.065 107.757 41.523 1.00 60.89 O
ATOM 6 C5' C A2105 116.940 107.343 42.588 1.00 58.84 C
ATOM 7 C4' C A2105 117.440 108.537 43.372 1.00 57.54 C
ATOM 8 O4' C A2105 118.155 109.440 42.489 1.00 56.26 O
ATOM 9 C3' C A2105 116.414 109.458 44.010 1.00 57.41 C
ATOM 10 O3' C A2105 115.865 108.944 45.215 1.00 57.79 O
ATOM 11 C2' C A2105 117.251 110.699 44.291 1.00 56.40 C
ATOM 12 O2' C A2105 118.063 110.581 45.445 1.00 56.24 O
ATOM 13 C1' C A2105 118.130 110.749 43.041 1.00 54.36 C
ATOM 14 N1 C A2105 117.604 111.693 42.041 1.00 51.87 N
ATOM 15 C2 C A2105 117.695 113.066 42.312 1.00 51.82 C
ATOM 16 O2 C A2105 118.209 113.435 43.384 1.00 51.26 O
ATOM 17 N3 C A2105 117.220 113.952 41.407 1.00 51.65 N
ATOM 18 C4 C A2105 116.670 113.516 40.271 1.00 51.72 C
ATOM 19 N4 C A2105 116.218 114.429 39.409 1.00 52.30 N
ATOM 20 C5 C A2105 116.561 112.126 39.969 1.00 50.53 C
ATOM 21 C6 C A2105 117.037 111.258 40.874 1.00 51.28 C
ATOM 22 P A A2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 23 OP1 A A2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 24 OP2 A A2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 25 O5' A A2106 114.413 110.955 45.701 1.00 53.34 O
TER
ATOM 1 O3' G B2103 120.944 111.407 40.920 1.00 70.17 O
ATOM 2 P A B2104 121.788 110.054 40.863 1.00 70.37 P
ATOM 3 OP1 A B2104 121.245 109.148 41.910 1.00 70.89 O
ATOM 4 OP2 A B2104 123.222 110.436 40.894 1.00 71.89 O
ATOM 5 O5' A B2104 121.441 109.461 39.425 1.00 69.20 O
ATOM 6 C5' A B2104 120.533 108.348 39.270 1.00 66.23 C
ATOM 7 C4' A B2104 119.107 108.843 39.173 1.00 63.69 C
ATOM 8 O4' A B2104 119.053 110.002 38.298 1.00 62.41 O
ATOM 9 C3' A B2104 118.106 107.841 38.610 1.00 62.49 C
ATOM 10 O3' A B2104 116.812 108.105 39.157 1.00 63.25 O
ATOM 11 C2' A B2104 118.084 108.229 37.139 1.00 61.66 C
ATOM 12 O2' A B2104 116.908 107.824 36.481 1.00 63.66 O
ATOM 13 C1' A B2104 118.154 109.751 37.242 1.00 61.46 C
ATOM 14 N9 A B2104 118.646 110.415 36.036 1.00 61.53 N
ATOM 15 C8 A B2104 119.925 110.820 35.747 1.00 62.10 C
ATOM 16 N7 A B2104 120.056 111.342 34.553 1.00 62.00 N
ATOM 17 C5 A B2104 118.776 111.286 34.023 1.00 61.61 C
ATOM 18 C6 A B2104 118.253 111.664 32.778 1.00 61.05 C
ATOM 19 N6 A B2104 118.987 112.164 31.788 1.00 62.42 N
ATOM 20 N1 A B2104 116.932 111.494 32.575 1.00 61.54 N
ATOM 21 C2 A B2104 116.198 110.961 33.556 1.00 61.50 C
ATOM 22 N3 A B2104 116.577 110.548 34.760 1.00 61.37 N
ATOM 23 C4 A B2104 117.894 110.738 34.933 1.00 61.57 C
ATOM 24 P C B2105 116.086 107.021 40.105 1.00 62.66 P
ATOM 25 OP1 C B2105 116.929 105.796 40.196 1.00 61.60 O
ATOM 26 OP2 C B2105 114.680 106.896 39.639 1.00 61.97 O
ATOM 27 O5' C B2105 116.065 107.757 41.523 1.00 60.89 O
TER
Atoms:
C2: (117.695,113.066,42.312)
OP1: (116.929,105.796,40.196)
OP2: (114.680,106.896,39.639)
C4: (116.670,113.516,40.271)
O5': (116.065,107.757,41.523)
C3': (116.414,109.458,44.010)
C1': (118.130,110.749,43.041)
O4': (118.155,109.440,42.489)
C5': (116.940,107.343,42.588)
P: (116.086,107.021,40.105)
O2: (118.209,113.435,43.384)
C4': (117.440,108.537,43.372)
C2': (117.251,110.699,44.291)
O2': (118.063,110.581,45.445)
N1: (117.604,111.693,42.041)
N3: (117.220,113.952,41.407)
N4: (116.218,114.429,39.409)
C6: (117.037,111.258,40.874)
C5: (116.561,112.126,39.969)
O3': (115.865,108.944,45.215)
OP1: (116.929,105.796,40.196)
OP2: (114.680,106.896,39.639)
C4: (116.670,113.516,40.271)
O5': (116.065,107.757,41.523)
C3': (116.414,109.458,44.010)
C1': (118.130,110.749,43.041)
O4': (118.155,109.440,42.489)
C5': (116.940,107.343,42.588)
P: (116.086,107.021,40.105)
O2: (118.209,113.435,43.384)
C4': (117.440,108.537,43.372)
C2': (117.251,110.699,44.291)
O2': (118.063,110.581,45.445)
N1: (117.604,111.693,42.041)
N3: (117.220,113.952,41.407)
N4: (116.218,114.429,39.409)
C6: (117.037,111.258,40.874)
C5: (116.561,112.126,39.969)
O3': (115.865,108.944,45.215)
OP1: (121.245,109.148,41.910)
OP2: (123.222,110.436,40.894)
C3': (118.106,107.841,38.610)
C1': (118.154,109.751,37.242)
C5': (120.533,108.348,39.270)
O4': (119.053,110.002,38.298)
C8: (119.925,110.820,35.747)
O2': (116.908,107.824,36.481)
C6: (118.253,111.664,32.778)
C5: (118.776,111.286,34.023)
C4: (117.894,110.738,34.933)
P: (121.788,110.054,40.863)
C4': (119.107,108.843,39.173)
C2': (118.084,108.229,37.139)
C2: (116.198,110.961,33.556)
N1: (116.932,111.494,32.575)
N3: (116.577,110.548,34.760)
N6: (118.987,112.164,31.788)
N7: (120.056,111.342,34.553)
N9: (118.646,110.415,36.036)
O5': (121.441,109.461,39.425)
O3': (116.812,108.105,39.157)
OP2: (123.222,110.436,40.894)
C3': (118.106,107.841,38.610)
C1': (118.154,109.751,37.242)
C5': (120.533,108.348,39.270)
O4': (119.053,110.002,38.298)
C8: (119.925,110.820,35.747)
O2': (116.908,107.824,36.481)
C6: (118.253,111.664,32.778)
C5: (118.776,111.286,34.023)
C4: (117.894,110.738,34.933)
P: (121.788,110.054,40.863)
C4': (119.107,108.843,39.173)
C2': (118.084,108.229,37.139)
C2: (116.198,110.961,33.556)
N1: (116.932,111.494,32.575)
N3: (116.577,110.548,34.760)
N6: (118.987,112.164,31.788)
N7: (120.056,111.342,34.553)
N9: (118.646,110.415,36.036)
O5': (121.441,109.461,39.425)
O3': (116.812,108.105,39.157)
Image (generated by PyMOL):