Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02187:02186
Extra
PDB:
ATOM 1 O3' A A2186 96.546 42.331 104.510 1.00102.40 O
ATOM 2 P C A2187 95.069 41.723 104.325 1.00 99.01 P
ATOM 3 OP1 C A2187 94.517 42.286 103.065 1.00 99.70 O
ATOM 4 OP2 C A2187 94.314 41.894 105.590 1.00100.05 O
ATOM 5 O5' C A2187 95.315 40.172 104.086 1.00 95.51 O
ATOM 6 C5' C A2187 95.950 39.706 102.887 1.00 90.03 C
ATOM 7 C4' C A2187 96.533 38.339 103.119 1.00 87.01 C
ATOM 8 O4' C A2187 97.491 38.426 104.207 1.00 87.10 O
ATOM 9 C3' C A2187 95.542 37.291 103.593 1.00 85.29 C
ATOM 10 O3' C A2187 94.828 36.702 102.518 1.00 83.91 O
ATOM 11 C2' C A2187 96.449 36.308 104.312 1.00 85.23 C
ATOM 12 O2' C A2187 97.191 35.501 103.421 1.00 84.08 O
ATOM 13 C1' C A2187 97.396 37.270 105.027 1.00 85.35 C
ATOM 14 N1 C A2187 96.884 37.681 106.351 1.00 85.05 N
ATOM 15 C2 C A2187 96.931 36.764 107.416 1.00 84.79 C
ATOM 16 O2 C A2187 97.410 35.634 107.221 1.00 83.54 O
ATOM 17 N3 C A2187 96.453 37.136 108.627 1.00 85.13 N
ATOM 18 C4 C A2187 95.951 38.362 108.800 1.00 85.52 C
ATOM 19 N4 C A2187 95.495 38.688 110.013 1.00 85.55 N
ATOM 20 C5 C A2187 95.894 39.312 107.738 1.00 85.27 C
ATOM 21 C6 C A2187 96.365 38.934 106.545 1.00 84.99 C
ATOM 22 P C A2188 93.392 36.030 102.785 1.00 82.43 P
ATOM 23 OP1 C A2188 92.899 35.519 101.475 1.00 81.35 O
ATOM 24 OP2 C A2188 92.560 36.985 103.571 1.00 81.08 O
ATOM 25 O5' C A2188 93.718 34.772 103.706 1.00 80.52 O
TER
ATOM 1 P A B2186 95.691 42.830 109.699 1.00109.14 P
ATOM 2 OP1 A B2186 94.574 41.940 110.109 1.00108.63 O
ATOM 3 OP2 A B2186 97.027 42.651 110.311 1.00109.28 O
ATOM 4 O5' A B2186 95.854 42.714 108.119 1.00108.60 O
ATOM 5 C5' A B2186 96.325 43.825 107.330 1.00106.95 C
ATOM 6 C4' A B2186 97.483 43.392 106.465 1.00106.65 C
ATOM 7 O4' A B2186 98.623 43.091 107.300 1.00108.10 O
ATOM 8 C3' A B2186 97.280 42.089 105.710 1.00106.05 C
ATOM 9 O3' A B2186 96.546 42.331 104.510 1.00102.40 O
ATOM 10 C2' A B2186 98.718 41.673 105.388 1.00108.41 C
ATOM 11 O2' A B2186 99.210 42.282 104.211 1.00110.46 O
ATOM 12 C1' A B2186 99.498 42.243 106.582 1.00109.78 C
ATOM 13 N9 A B2186 100.103 41.273 107.502 1.00112.32 N
ATOM 14 C8 A B2186 99.482 40.505 108.459 1.00113.66 C
ATOM 15 N7 A B2186 100.301 39.726 109.128 1.00114.33 N
ATOM 16 C5 A B2186 101.547 39.996 108.576 1.00114.00 C
ATOM 17 C6 A B2186 102.835 39.488 108.846 1.00113.70 C
ATOM 18 N6 A B2186 103.091 38.565 109.778 1.00112.79 N
ATOM 19 N1 A B2186 103.865 39.968 108.115 1.00113.77 N
ATOM 20 C2 A B2186 103.610 40.894 107.179 1.00113.77 C
ATOM 21 N3 A B2186 102.448 41.447 106.832 1.00113.57 N
ATOM 22 C4 A B2186 101.442 40.950 107.575 1.00113.51 C
ATOM 23 P C B2187 95.069 41.723 104.325 1.00 99.01 P
ATOM 24 OP1 C B2187 94.517 42.286 103.065 1.00 99.70 O
ATOM 25 OP2 C B2187 94.314 41.894 105.590 1.00100.05 O
ATOM 26 O5' C B2187 95.315 40.172 104.086 1.00 95.51 O
TER
ATOM 2 P C A2187 95.069 41.723 104.325 1.00 99.01 P
ATOM 3 OP1 C A2187 94.517 42.286 103.065 1.00 99.70 O
ATOM 4 OP2 C A2187 94.314 41.894 105.590 1.00100.05 O
ATOM 5 O5' C A2187 95.315 40.172 104.086 1.00 95.51 O
ATOM 6 C5' C A2187 95.950 39.706 102.887 1.00 90.03 C
ATOM 7 C4' C A2187 96.533 38.339 103.119 1.00 87.01 C
ATOM 8 O4' C A2187 97.491 38.426 104.207 1.00 87.10 O
ATOM 9 C3' C A2187 95.542 37.291 103.593 1.00 85.29 C
ATOM 10 O3' C A2187 94.828 36.702 102.518 1.00 83.91 O
ATOM 11 C2' C A2187 96.449 36.308 104.312 1.00 85.23 C
ATOM 12 O2' C A2187 97.191 35.501 103.421 1.00 84.08 O
ATOM 13 C1' C A2187 97.396 37.270 105.027 1.00 85.35 C
ATOM 14 N1 C A2187 96.884 37.681 106.351 1.00 85.05 N
ATOM 15 C2 C A2187 96.931 36.764 107.416 1.00 84.79 C
ATOM 16 O2 C A2187 97.410 35.634 107.221 1.00 83.54 O
ATOM 17 N3 C A2187 96.453 37.136 108.627 1.00 85.13 N
ATOM 18 C4 C A2187 95.951 38.362 108.800 1.00 85.52 C
ATOM 19 N4 C A2187 95.495 38.688 110.013 1.00 85.55 N
ATOM 20 C5 C A2187 95.894 39.312 107.738 1.00 85.27 C
ATOM 21 C6 C A2187 96.365 38.934 106.545 1.00 84.99 C
ATOM 22 P C A2188 93.392 36.030 102.785 1.00 82.43 P
ATOM 23 OP1 C A2188 92.899 35.519 101.475 1.00 81.35 O
ATOM 24 OP2 C A2188 92.560 36.985 103.571 1.00 81.08 O
ATOM 25 O5' C A2188 93.718 34.772 103.706 1.00 80.52 O
TER
ATOM 1 P A B2186 95.691 42.830 109.699 1.00109.14 P
ATOM 2 OP1 A B2186 94.574 41.940 110.109 1.00108.63 O
ATOM 3 OP2 A B2186 97.027 42.651 110.311 1.00109.28 O
ATOM 4 O5' A B2186 95.854 42.714 108.119 1.00108.60 O
ATOM 5 C5' A B2186 96.325 43.825 107.330 1.00106.95 C
ATOM 6 C4' A B2186 97.483 43.392 106.465 1.00106.65 C
ATOM 7 O4' A B2186 98.623 43.091 107.300 1.00108.10 O
ATOM 8 C3' A B2186 97.280 42.089 105.710 1.00106.05 C
ATOM 9 O3' A B2186 96.546 42.331 104.510 1.00102.40 O
ATOM 10 C2' A B2186 98.718 41.673 105.388 1.00108.41 C
ATOM 11 O2' A B2186 99.210 42.282 104.211 1.00110.46 O
ATOM 12 C1' A B2186 99.498 42.243 106.582 1.00109.78 C
ATOM 13 N9 A B2186 100.103 41.273 107.502 1.00112.32 N
ATOM 14 C8 A B2186 99.482 40.505 108.459 1.00113.66 C
ATOM 15 N7 A B2186 100.301 39.726 109.128 1.00114.33 N
ATOM 16 C5 A B2186 101.547 39.996 108.576 1.00114.00 C
ATOM 17 C6 A B2186 102.835 39.488 108.846 1.00113.70 C
ATOM 18 N6 A B2186 103.091 38.565 109.778 1.00112.79 N
ATOM 19 N1 A B2186 103.865 39.968 108.115 1.00113.77 N
ATOM 20 C2 A B2186 103.610 40.894 107.179 1.00113.77 C
ATOM 21 N3 A B2186 102.448 41.447 106.832 1.00113.57 N
ATOM 22 C4 A B2186 101.442 40.950 107.575 1.00113.51 C
ATOM 23 P C B2187 95.069 41.723 104.325 1.00 99.01 P
ATOM 24 OP1 C B2187 94.517 42.286 103.065 1.00 99.70 O
ATOM 25 OP2 C B2187 94.314 41.894 105.590 1.00100.05 O
ATOM 26 O5' C B2187 95.315 40.172 104.086 1.00 95.51 O
TER
Atoms:
C2: (96.931,36.764,107.416)
OP1: (94.517,42.286,103.065)
OP2: (94.314,41.894,105.590)
C4: (95.951,38.362,108.800)
O5': (95.315,40.172,104.086)
C3': (95.542,37.291,103.593)
C1': (97.396,37.270,105.027)
O4': (97.491,38.426,104.207)
C5': (95.950,39.706,102.887)
P: (95.069,41.723,104.325)
O2: (97.410,35.634,107.221)
C4': (96.533,38.339,103.119)
C2': (96.449,36.308,104.312)
O2': (97.191,35.501,103.421)
N1: (96.884,37.681,106.351)
N3: (96.453,37.136,108.627)
N4: (95.495,38.688,110.013)
C6: (96.365,38.934,106.545)
C5: (95.894,39.312,107.738)
O3': (94.828,36.702,102.518)
OP1: (94.517,42.286,103.065)
OP2: (94.314,41.894,105.590)
C4: (95.951,38.362,108.800)
O5': (95.315,40.172,104.086)
C3': (95.542,37.291,103.593)
C1': (97.396,37.270,105.027)
O4': (97.491,38.426,104.207)
C5': (95.950,39.706,102.887)
P: (95.069,41.723,104.325)
O2: (97.410,35.634,107.221)
C4': (96.533,38.339,103.119)
C2': (96.449,36.308,104.312)
O2': (97.191,35.501,103.421)
N1: (96.884,37.681,106.351)
N3: (96.453,37.136,108.627)
N4: (95.495,38.688,110.013)
C6: (96.365,38.934,106.545)
C5: (95.894,39.312,107.738)
O3': (94.828,36.702,102.518)
OP1: (94.574,41.940,110.109)
OP2: (97.027,42.651,110.311)
C3': (97.280,42.089,105.710)
C1': (99.498,42.243,106.582)
C5': (96.325,43.825,107.330)
O4': (98.623,43.091,107.300)
C8: (99.482,40.505,108.459)
O2': (99.210,42.282,104.211)
C6: (102.835,39.488,108.846)
C5: (101.547,39.996,108.576)
C4: (101.442,40.950,107.575)
P: (95.691,42.830,109.699)
C4': (97.483,43.392,106.465)
C2': (98.718,41.673,105.388)
C2: (103.610,40.894,107.179)
N1: (103.865,39.968,108.115)
N3: (102.448,41.447,106.832)
N6: (103.091,38.565,109.778)
N7: (100.301,39.726,109.128)
N9: (100.103,41.273,107.502)
O5': (95.854,42.714,108.119)
O3': (96.546,42.331,104.510)
OP2: (97.027,42.651,110.311)
C3': (97.280,42.089,105.710)
C1': (99.498,42.243,106.582)
C5': (96.325,43.825,107.330)
O4': (98.623,43.091,107.300)
C8: (99.482,40.505,108.459)
O2': (99.210,42.282,104.211)
C6: (102.835,39.488,108.846)
C5: (101.547,39.996,108.576)
C4: (101.442,40.950,107.575)
P: (95.691,42.830,109.699)
C4': (97.483,43.392,106.465)
C2': (98.718,41.673,105.388)
C2: (103.610,40.894,107.179)
N1: (103.865,39.968,108.115)
N3: (102.448,41.447,106.832)
N6: (103.091,38.565,109.778)
N7: (100.301,39.726,109.128)
N9: (100.103,41.273,107.502)
O5': (95.854,42.714,108.119)
O3': (96.546,42.331,104.510)
Image (generated by PyMOL):