Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01353:01352
Extra
PDB:
ATOM 1 O3' A A1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 2 P C A1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 3 OP1 C A1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 4 OP2 C A1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 5 O5' C A1353 52.958 177.909 85.183 1.00 48.07 O
ATOM 6 C5' C A1353 54.311 178.384 85.298 1.00 44.96 C
ATOM 7 C4' C A1353 55.279 177.227 85.311 1.00 42.84 C
ATOM 8 O4' C A1353 54.963 176.324 86.400 1.00 41.75 O
ATOM 9 C3' C A1353 55.252 176.336 84.089 1.00 41.81 C
ATOM 10 O3' C A1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 11 C2' C A1353 55.867 175.048 84.613 1.00 42.62 C
ATOM 12 O2' C A1353 57.282 175.116 84.693 1.00 43.61 O
ATOM 13 C1' C A1353 55.269 174.990 86.018 1.00 41.56 C
ATOM 14 N1 C A1353 54.041 174.177 86.109 1.00 41.19 N
ATOM 15 C2 C A1353 54.148 172.783 86.128 1.00 42.53 C
ATOM 16 O2 C A1353 55.265 172.265 86.037 1.00 45.38 O
ATOM 17 N3 C A1353 53.031 172.034 86.245 1.00 43.10 N
ATOM 18 C4 C A1353 51.843 172.626 86.340 1.00 42.65 C
ATOM 19 N4 C A1353 50.771 171.856 86.486 1.00 41.36 N
ATOM 20 C5 C A1353 51.701 174.040 86.300 1.00 43.89 C
ATOM 21 C6 C A1353 52.814 174.769 86.185 1.00 42.81 C
ATOM 22 P C A1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 23 OP1 C A1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 24 OP2 C A1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 25 O5' C A1354 56.189 177.276 80.587 1.00 42.62 O
TER
ATOM 1 O3' A B1351 47.876 177.968 86.554 1.00 53.69 O
ATOM 2 P A B1352 47.542 177.315 87.985 1.00 56.78 P
ATOM 3 OP1 A B1352 46.954 175.977 87.750 1.00 55.71 O
ATOM 4 OP2 A B1352 46.789 178.311 88.793 1.00 56.62 O
ATOM 5 O5' A B1352 48.962 177.134 88.670 1.00 53.31 O
ATOM 6 C5' A B1352 49.613 178.247 89.291 1.00 52.35 C
ATOM 7 C4' A B1352 51.069 177.936 89.509 1.00 52.58 C
ATOM 8 O4' A B1352 51.202 176.886 90.496 1.00 52.85 O
ATOM 9 C3' A B1352 51.786 177.410 88.284 1.00 50.50 C
ATOM 10 O3' A B1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 11 C2' A B1352 52.932 176.621 88.889 1.00 51.45 C
ATOM 12 O2' A B1352 53.969 177.472 89.324 1.00 51.53 O
ATOM 13 C1' A B1352 52.258 176.023 90.126 1.00 52.69 C
ATOM 14 N9 A B1352 51.698 174.684 89.962 1.00 53.30 N
ATOM 15 C8 A B1352 50.377 174.323 90.093 1.00 54.71 C
ATOM 16 N7 A B1352 50.166 173.035 89.979 1.00 55.72 N
ATOM 17 C5 A B1352 51.429 172.513 89.741 1.00 53.67 C
ATOM 18 C6 A B1352 51.873 171.213 89.557 1.00 52.30 C
ATOM 19 N6 A B1352 51.064 170.160 89.598 1.00 51.90 N
ATOM 20 N1 A B1352 53.190 171.023 89.333 1.00 53.28 N
ATOM 21 C2 A B1352 53.998 172.089 89.305 1.00 52.21 C
ATOM 22 N3 A B1352 53.699 173.369 89.475 1.00 52.18 N
ATOM 23 C4 A B1352 52.380 173.518 89.698 1.00 53.58 C
ATOM 24 P C B1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 25 OP1 C B1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 26 OP2 C B1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 27 O5' C B1353 52.958 177.909 85.183 1.00 48.07 O
TER
ATOM 2 P C A1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 3 OP1 C A1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 4 OP2 C A1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 5 O5' C A1353 52.958 177.909 85.183 1.00 48.07 O
ATOM 6 C5' C A1353 54.311 178.384 85.298 1.00 44.96 C
ATOM 7 C4' C A1353 55.279 177.227 85.311 1.00 42.84 C
ATOM 8 O4' C A1353 54.963 176.324 86.400 1.00 41.75 O
ATOM 9 C3' C A1353 55.252 176.336 84.089 1.00 41.81 C
ATOM 10 O3' C A1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 11 C2' C A1353 55.867 175.048 84.613 1.00 42.62 C
ATOM 12 O2' C A1353 57.282 175.116 84.693 1.00 43.61 O
ATOM 13 C1' C A1353 55.269 174.990 86.018 1.00 41.56 C
ATOM 14 N1 C A1353 54.041 174.177 86.109 1.00 41.19 N
ATOM 15 C2 C A1353 54.148 172.783 86.128 1.00 42.53 C
ATOM 16 O2 C A1353 55.265 172.265 86.037 1.00 45.38 O
ATOM 17 N3 C A1353 53.031 172.034 86.245 1.00 43.10 N
ATOM 18 C4 C A1353 51.843 172.626 86.340 1.00 42.65 C
ATOM 19 N4 C A1353 50.771 171.856 86.486 1.00 41.36 N
ATOM 20 C5 C A1353 51.701 174.040 86.300 1.00 43.89 C
ATOM 21 C6 C A1353 52.814 174.769 86.185 1.00 42.81 C
ATOM 22 P C A1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 23 OP1 C A1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 24 OP2 C A1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 25 O5' C A1354 56.189 177.276 80.587 1.00 42.62 O
TER
ATOM 1 O3' A B1351 47.876 177.968 86.554 1.00 53.69 O
ATOM 2 P A B1352 47.542 177.315 87.985 1.00 56.78 P
ATOM 3 OP1 A B1352 46.954 175.977 87.750 1.00 55.71 O
ATOM 4 OP2 A B1352 46.789 178.311 88.793 1.00 56.62 O
ATOM 5 O5' A B1352 48.962 177.134 88.670 1.00 53.31 O
ATOM 6 C5' A B1352 49.613 178.247 89.291 1.00 52.35 C
ATOM 7 C4' A B1352 51.069 177.936 89.509 1.00 52.58 C
ATOM 8 O4' A B1352 51.202 176.886 90.496 1.00 52.85 O
ATOM 9 C3' A B1352 51.786 177.410 88.284 1.00 50.50 C
ATOM 10 O3' A B1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 11 C2' A B1352 52.932 176.621 88.889 1.00 51.45 C
ATOM 12 O2' A B1352 53.969 177.472 89.324 1.00 51.53 O
ATOM 13 C1' A B1352 52.258 176.023 90.126 1.00 52.69 C
ATOM 14 N9 A B1352 51.698 174.684 89.962 1.00 53.30 N
ATOM 15 C8 A B1352 50.377 174.323 90.093 1.00 54.71 C
ATOM 16 N7 A B1352 50.166 173.035 89.979 1.00 55.72 N
ATOM 17 C5 A B1352 51.429 172.513 89.741 1.00 53.67 C
ATOM 18 C6 A B1352 51.873 171.213 89.557 1.00 52.30 C
ATOM 19 N6 A B1352 51.064 170.160 89.598 1.00 51.90 N
ATOM 20 N1 A B1352 53.190 171.023 89.333 1.00 53.28 N
ATOM 21 C2 A B1352 53.998 172.089 89.305 1.00 52.21 C
ATOM 22 N3 A B1352 53.699 173.369 89.475 1.00 52.18 N
ATOM 23 C4 A B1352 52.380 173.518 89.698 1.00 53.58 C
ATOM 24 P C B1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 25 OP1 C B1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 26 OP2 C B1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 27 O5' C B1353 52.958 177.909 85.183 1.00 48.07 O
TER
Atoms:
C2: (54.148,172.783,86.128)
OP1: (51.812,180.064,85.653)
OP2: (50.518,177.856,85.817)
C4: (51.843,172.626,86.340)
O5': (52.958,177.909,85.183)
C3': (55.252,176.336,84.089)
C1': (55.269,174.990,86.018)
O4': (54.963,176.324,86.400)
C5': (54.311,178.384,85.298)
P: (51.783,178.624,85.985)
O2: (55.265,172.265,86.037)
C4': (55.279,177.227,85.311)
C2': (55.867,175.048,84.613)
O2': (57.282,175.116,84.693)
N1: (54.041,174.177,86.109)
N3: (53.031,172.034,86.245)
N4: (50.771,171.856,86.486)
C6: (52.814,174.769,86.185)
C5: (51.701,174.040,86.300)
O3': (56.022,176.887,83.046)
OP1: (51.812,180.064,85.653)
OP2: (50.518,177.856,85.817)
C4: (51.843,172.626,86.340)
O5': (52.958,177.909,85.183)
C3': (55.252,176.336,84.089)
C1': (55.269,174.990,86.018)
O4': (54.963,176.324,86.400)
C5': (54.311,178.384,85.298)
P: (51.783,178.624,85.985)
O2: (55.265,172.265,86.037)
C4': (55.279,177.227,85.311)
C2': (55.867,175.048,84.613)
O2': (57.282,175.116,84.693)
N1: (54.041,174.177,86.109)
N3: (53.031,172.034,86.245)
N4: (50.771,171.856,86.486)
C6: (52.814,174.769,86.185)
C5: (51.701,174.040,86.300)
O3': (56.022,176.887,83.046)
OP1: (46.954,175.977,87.750)
OP2: (46.789,178.311,88.793)
C3': (51.786,177.410,88.284)
C1': (52.258,176.023,90.126)
C5': (49.613,178.247,89.291)
O4': (51.202,176.886,90.496)
C8: (50.377,174.323,90.093)
O2': (53.969,177.472,89.324)
C6: (51.873,171.213,89.557)
C5: (51.429,172.513,89.741)
C4: (52.380,173.518,89.698)
P: (47.542,177.315,87.985)
C4': (51.069,177.936,89.509)
C2': (52.932,176.621,88.889)
C2: (53.998,172.089,89.305)
N1: (53.190,171.023,89.333)
N3: (53.699,173.369,89.475)
N6: (51.064,170.160,89.598)
N7: (50.166,173.035,89.979)
N9: (51.698,174.684,89.962)
O5': (48.962,177.134,88.670)
O3': (52.241,178.494,87.510)
OP2: (46.789,178.311,88.793)
C3': (51.786,177.410,88.284)
C1': (52.258,176.023,90.126)
C5': (49.613,178.247,89.291)
O4': (51.202,176.886,90.496)
C8: (50.377,174.323,90.093)
O2': (53.969,177.472,89.324)
C6: (51.873,171.213,89.557)
C5: (51.429,172.513,89.741)
C4: (52.380,173.518,89.698)
P: (47.542,177.315,87.985)
C4': (51.069,177.936,89.509)
C2': (52.932,176.621,88.889)
C2: (53.998,172.089,89.305)
N1: (53.190,171.023,89.333)
N3: (53.699,173.369,89.475)
N6: (51.064,170.160,89.598)
N7: (50.166,173.035,89.979)
N9: (51.698,174.684,89.962)
O5': (48.962,177.134,88.670)
O3': (52.241,178.494,87.510)
Image (generated by PyMOL):