ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0949:0948

Extra

PDB:
ATOM 1 O3' A A 948 66.559 53.392 116.592 1.00 58.12 O
ATOM 2 P C A 949 67.686 54.501 116.927 1.00 58.31 P
ATOM 3 OP1 C A 949 68.871 53.826 117.509 1.00 59.59 O
ATOM 4 OP2 C A 949 67.047 55.616 117.677 1.00 57.69 O
ATOM 5 O5' C A 949 68.157 55.008 115.495 1.00 55.45 O
ATOM 6 C5' C A 949 68.668 54.079 114.528 1.00 54.30 C
ATOM 7 C4' C A 949 68.792 54.738 113.174 1.00 54.54 C
ATOM 8 O4' C A 949 67.505 55.287 112.773 1.00 55.07 O
ATOM 9 C3' C A 949 69.721 55.933 113.124 1.00 53.69 C
ATOM 10 O3' C A 949 71.072 55.550 112.994 1.00 53.36 O
ATOM 11 C2' C A 949 69.216 56.679 111.903 1.00 53.98 C
ATOM 12 O2' C A 949 69.650 56.093 110.697 1.00 54.48 O
ATOM 13 C1' C A 949 67.704 56.493 112.049 1.00 53.24 C
ATOM 14 N1 C A 949 67.079 57.613 112.789 1.00 51.63 N
ATOM 15 C2 C A 949 66.961 58.858 112.151 1.00 52.32 C
ATOM 16 O2 C A 949 67.351 58.976 110.978 1.00 53.76 O
ATOM 17 N3 C A 949 66.426 59.899 112.827 1.00 51.66 N
ATOM 18 C4 C A 949 66.017 59.739 114.082 1.00 49.49 C
ATOM 19 N4 C A 949 65.515 60.795 114.703 1.00 49.23 N
ATOM 20 C5 C A 949 66.110 58.488 114.750 1.00 49.02 C
ATOM 21 C6 C A 949 66.639 57.459 114.073 1.00 49.13 C
ATOM 22 P C A 950 72.191 56.368 113.788 1.00 55.08 P
ATOM 23 OP1 C A 950 73.536 55.922 113.356 1.00 55.12 O
ATOM 24 OP2 C A 950 71.834 56.342 115.222 1.00 55.48 O
ATOM 25 O5' C A 950 71.984 57.850 113.268 1.00 57.34 O
TER

ATOM 1 O3' G B 947 64.971 53.305 120.593 1.00 80.53 O
ATOM 2 P A B 948 63.481 52.714 120.396 1.00 76.57 P
ATOM 3 OP1 A B 948 62.535 53.671 121.018 1.00 78.12 O
ATOM 4 OP2 A B 948 63.422 51.287 120.786 1.00 77.15 O
ATOM 5 O5' A B 948 63.283 52.759 118.814 1.00 72.73 O
ATOM 6 C5' A B 948 64.014 51.862 117.948 1.00 64.91 C
ATOM 7 C4' A B 948 64.286 52.506 116.603 1.00 60.20 C
ATOM 8 O4' A B 948 63.033 52.942 116.016 1.00 57.95 O
ATOM 9 C3' A B 948 65.169 53.747 116.588 1.00 58.29 C
ATOM 10 O3' A B 948 66.559 53.392 116.592 1.00 58.12 O
ATOM 11 C2' A B 948 64.745 54.416 115.288 1.00 56.86 C
ATOM 12 O2' A B 948 65.317 53.805 114.154 1.00 55.68 O
ATOM 13 C1' A B 948 63.238 54.137 115.279 1.00 58.08 C
ATOM 14 N9 A B 948 62.430 55.202 115.888 1.00 59.52 N
ATOM 15 C8 A B 948 61.561 55.087 116.947 1.00 59.03 C
ATOM 16 N7 A B 948 61.001 56.219 117.297 1.00 59.15 N
ATOM 17 C5 A B 948 61.526 57.143 116.406 1.00 58.29 C
ATOM 18 C6 A B 948 61.329 58.522 116.252 1.00 57.64 C
ATOM 19 N6 A B 948 60.524 59.245 117.028 1.00 57.43 N
ATOM 20 N1 A B 948 61.994 59.145 115.261 1.00 57.49 N
ATOM 21 C2 A B 948 62.798 58.427 114.483 1.00 57.76 C
ATOM 22 N3 A B 948 63.071 57.128 114.527 1.00 60.07 N
ATOM 23 C4 A B 948 62.397 56.532 115.525 1.00 59.36 C
ATOM 24 P C B 949 67.686 54.501 116.927 1.00 58.31 P
ATOM 25 OP1 C B 949 68.871 53.826 117.509 1.00 59.59 O
ATOM 26 OP2 C B 949 67.047 55.616 117.677 1.00 57.69 O
ATOM 27 O5' C B 949 68.157 55.008 115.495 1.00 55.45 O
TER

Atoms:
C2: (66.961,58.858,112.151)
OP1: (68.871,53.826,117.509)
OP2: (67.047,55.616,117.677)
C4: (66.017,59.739,114.082)
O5': (68.157,55.008,115.495)
C3': (69.721,55.933,113.124)
C1': (67.704,56.493,112.049)
O4': (67.505,55.287,112.773)
C5': (68.668,54.079,114.528)
P: (67.686,54.501,116.927)
O2: (67.351,58.976,110.978)
C4': (68.792,54.738,113.174)
C2': (69.216,56.679,111.903)
O2': (69.650,56.093,110.697)
N1: (67.079,57.613,112.789)
N3: (66.426,59.899,112.827)
N4: (65.515,60.795,114.703)
C6: (66.639,57.459,114.073)
C5: (66.110,58.488,114.750)
O3': (71.072,55.550,112.994)
OP1: (62.535,53.671,121.018)
OP2: (63.422,51.287,120.786)
C3': (65.169,53.747,116.588)
C1': (63.238,54.137,115.279)
C5': (64.014,51.862,117.948)
O4': (63.033,52.942,116.016)
C8: (61.561,55.087,116.947)
O2': (65.317,53.805,114.154)
C6: (61.329,58.522,116.252)
C5: (61.526,57.143,116.406)
C4: (62.397,56.532,115.525)
P: (63.481,52.714,120.396)
C4': (64.286,52.506,116.603)
C2': (64.745,54.416,115.288)
C2: (62.798,58.427,114.483)
N1: (61.994,59.145,115.261)
N3: (63.071,57.128,114.527)
N6: (60.524,59.245,117.028)
N7: (61.001,56.219,117.297)
N9: (62.430,55.202,115.888)
O5': (63.283,52.759,118.814)
O3': (66.559,53.392,116.592)
Image (generated by PyMOL):
PyMOL image
show in jmol