Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02105:02104
Extra
PDB:
ATOM 1 O3' A A2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 2 P C A2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 3 OP1 C A2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 4 OP2 C A2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 5 O5' C A2105 115.766 107.723 41.447 1.00 59.76 O
ATOM 6 C5' C A2105 116.586 107.310 42.558 1.00 59.14 C
ATOM 7 C4' C A2105 117.131 108.508 43.314 1.00 58.03 C
ATOM 8 O4' C A2105 117.880 109.379 42.424 1.00 57.43 O
ATOM 9 C3' C A2105 116.134 109.450 43.961 1.00 57.22 C
ATOM 10 O3' C A2105 115.642 108.923 45.186 1.00 56.26 O
ATOM 11 C2' C A2105 116.990 110.690 44.194 1.00 56.96 C
ATOM 12 O2' C A2105 117.844 110.578 45.313 1.00 57.53 O
ATOM 13 C1' C A2105 117.854 110.703 42.934 1.00 56.01 C
ATOM 14 N1 C A2105 117.345 111.619 41.898 1.00 56.27 N
ATOM 15 C2 C A2105 117.509 113.004 42.087 1.00 56.69 C
ATOM 16 O2 C A2105 118.064 113.411 43.120 1.00 56.74 O
ATOM 17 N3 C A2105 117.054 113.860 41.143 1.00 56.98 N
ATOM 18 C4 C A2105 116.453 113.387 40.049 1.00 57.34 C
ATOM 19 N4 C A2105 116.019 114.269 39.149 1.00 57.05 N
ATOM 20 C5 C A2105 116.268 111.987 39.832 1.00 56.77 C
ATOM 21 C6 C A2105 116.725 111.147 40.773 1.00 56.15 C
ATOM 22 P A A2106 114.164 109.309 45.682 1.00 55.56 P
ATOM 23 OP1 A A2106 114.030 108.821 47.080 1.00 56.11 O
ATOM 24 OP2 A A2106 113.197 108.856 44.650 1.00 54.88 O
ATOM 25 O5' A A2106 114.166 110.900 45.721 1.00 51.97 O
TER
ATOM 1 O3' G B2103 120.826 111.307 40.893 1.00 68.32 O
ATOM 2 P A B2104 121.639 109.938 40.763 1.00 68.36 P
ATOM 3 OP1 A B2104 121.097 109.024 41.808 1.00 69.68 O
ATOM 4 OP2 A B2104 123.088 110.261 40.746 1.00 69.12 O
ATOM 5 O5' A B2104 121.227 109.399 39.320 1.00 67.10 O
ATOM 6 C5' A B2104 120.297 108.307 39.163 1.00 63.55 C
ATOM 7 C4' A B2104 118.877 108.828 39.100 1.00 60.55 C
ATOM 8 O4' A B2104 118.822 109.996 38.236 1.00 58.98 O
ATOM 9 C3' A B2104 117.860 107.842 38.539 1.00 59.15 C
ATOM 10 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 11 C2' A B2104 117.834 108.233 37.071 1.00 58.40 C
ATOM 12 O2' A B2104 116.659 107.825 36.412 1.00 60.18 O
ATOM 13 C1' A B2104 117.924 109.754 37.176 1.00 58.22 C
ATOM 14 N9 A B2104 118.438 110.402 35.972 1.00 57.90 N
ATOM 15 C8 A B2104 119.717 110.826 35.717 1.00 58.31 C
ATOM 16 N7 A B2104 119.877 111.325 34.518 1.00 58.40 N
ATOM 17 C5 A B2104 118.618 111.234 33.949 1.00 58.12 C
ATOM 18 C6 A B2104 118.132 111.576 32.682 1.00 58.60 C
ATOM 19 N6 A B2104 118.894 112.077 31.711 1.00 60.23 N
ATOM 20 N1 A B2104 116.821 111.371 32.436 1.00 59.09 N
ATOM 21 C2 A B2104 116.065 110.843 33.402 1.00 57.85 C
ATOM 22 N3 A B2104 116.410 110.465 34.627 1.00 57.59 N
ATOM 23 C4 A B2104 117.717 110.688 34.839 1.00 57.99 C
ATOM 24 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 25 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 26 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 27 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
TER
ATOM 2 P C A2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 3 OP1 C A2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 4 OP2 C A2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 5 O5' C A2105 115.766 107.723 41.447 1.00 59.76 O
ATOM 6 C5' C A2105 116.586 107.310 42.558 1.00 59.14 C
ATOM 7 C4' C A2105 117.131 108.508 43.314 1.00 58.03 C
ATOM 8 O4' C A2105 117.880 109.379 42.424 1.00 57.43 O
ATOM 9 C3' C A2105 116.134 109.450 43.961 1.00 57.22 C
ATOM 10 O3' C A2105 115.642 108.923 45.186 1.00 56.26 O
ATOM 11 C2' C A2105 116.990 110.690 44.194 1.00 56.96 C
ATOM 12 O2' C A2105 117.844 110.578 45.313 1.00 57.53 O
ATOM 13 C1' C A2105 117.854 110.703 42.934 1.00 56.01 C
ATOM 14 N1 C A2105 117.345 111.619 41.898 1.00 56.27 N
ATOM 15 C2 C A2105 117.509 113.004 42.087 1.00 56.69 C
ATOM 16 O2 C A2105 118.064 113.411 43.120 1.00 56.74 O
ATOM 17 N3 C A2105 117.054 113.860 41.143 1.00 56.98 N
ATOM 18 C4 C A2105 116.453 113.387 40.049 1.00 57.34 C
ATOM 19 N4 C A2105 116.019 114.269 39.149 1.00 57.05 N
ATOM 20 C5 C A2105 116.268 111.987 39.832 1.00 56.77 C
ATOM 21 C6 C A2105 116.725 111.147 40.773 1.00 56.15 C
ATOM 22 P A A2106 114.164 109.309 45.682 1.00 55.56 P
ATOM 23 OP1 A A2106 114.030 108.821 47.080 1.00 56.11 O
ATOM 24 OP2 A A2106 113.197 108.856 44.650 1.00 54.88 O
ATOM 25 O5' A A2106 114.166 110.900 45.721 1.00 51.97 O
TER
ATOM 1 O3' G B2103 120.826 111.307 40.893 1.00 68.32 O
ATOM 2 P A B2104 121.639 109.938 40.763 1.00 68.36 P
ATOM 3 OP1 A B2104 121.097 109.024 41.808 1.00 69.68 O
ATOM 4 OP2 A B2104 123.088 110.261 40.746 1.00 69.12 O
ATOM 5 O5' A B2104 121.227 109.399 39.320 1.00 67.10 O
ATOM 6 C5' A B2104 120.297 108.307 39.163 1.00 63.55 C
ATOM 7 C4' A B2104 118.877 108.828 39.100 1.00 60.55 C
ATOM 8 O4' A B2104 118.822 109.996 38.236 1.00 58.98 O
ATOM 9 C3' A B2104 117.860 107.842 38.539 1.00 59.15 C
ATOM 10 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 11 C2' A B2104 117.834 108.233 37.071 1.00 58.40 C
ATOM 12 O2' A B2104 116.659 107.825 36.412 1.00 60.18 O
ATOM 13 C1' A B2104 117.924 109.754 37.176 1.00 58.22 C
ATOM 14 N9 A B2104 118.438 110.402 35.972 1.00 57.90 N
ATOM 15 C8 A B2104 119.717 110.826 35.717 1.00 58.31 C
ATOM 16 N7 A B2104 119.877 111.325 34.518 1.00 58.40 N
ATOM 17 C5 A B2104 118.618 111.234 33.949 1.00 58.12 C
ATOM 18 C6 A B2104 118.132 111.576 32.682 1.00 58.60 C
ATOM 19 N6 A B2104 118.894 112.077 31.711 1.00 60.23 N
ATOM 20 N1 A B2104 116.821 111.371 32.436 1.00 59.09 N
ATOM 21 C2 A B2104 116.065 110.843 33.402 1.00 57.85 C
ATOM 22 N3 A B2104 116.410 110.465 34.627 1.00 57.59 N
ATOM 23 C4 A B2104 117.717 110.688 34.839 1.00 57.99 C
ATOM 24 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 25 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 26 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 27 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
TER
Atoms:
C2: (117.509,113.004,42.087)
OP1: (116.800,105.828,40.158)
OP2: (114.493,106.750,39.539)
C4: (116.453,113.387,40.049)
O5': (115.766,107.723,41.447)
C3': (116.134,109.450,43.961)
C1': (117.854,110.703,42.934)
O4': (117.880,109.379,42.424)
C5': (116.586,107.310,42.558)
P: (115.871,106.983,40.035)
O2: (118.064,113.411,43.120)
C4': (117.131,108.508,43.314)
C2': (116.990,110.690,44.194)
O2': (117.844,110.578,45.313)
N1: (117.345,111.619,41.898)
N3: (117.054,113.860,41.143)
N4: (116.019,114.269,39.149)
C6: (116.725,111.147,40.773)
C5: (116.268,111.987,39.832)
O3': (115.642,108.923,45.186)
OP1: (116.800,105.828,40.158)
OP2: (114.493,106.750,39.539)
C4: (116.453,113.387,40.049)
O5': (115.766,107.723,41.447)
C3': (116.134,109.450,43.961)
C1': (117.854,110.703,42.934)
O4': (117.880,109.379,42.424)
C5': (116.586,107.310,42.558)
P: (115.871,106.983,40.035)
O2: (118.064,113.411,43.120)
C4': (117.131,108.508,43.314)
C2': (116.990,110.690,44.194)
O2': (117.844,110.578,45.313)
N1: (117.345,111.619,41.898)
N3: (117.054,113.860,41.143)
N4: (116.019,114.269,39.149)
C6: (116.725,111.147,40.773)
C5: (116.268,111.987,39.832)
O3': (115.642,108.923,45.186)
OP1: (121.097,109.024,41.808)
OP2: (123.088,110.261,40.746)
C3': (117.860,107.842,38.539)
C1': (117.924,109.754,37.176)
C5': (120.297,108.307,39.163)
O4': (118.822,109.996,38.236)
C8: (119.717,110.826,35.717)
O2': (116.659,107.825,36.412)
C6: (118.132,111.576,32.682)
C5: (118.618,111.234,33.949)
C4: (117.717,110.688,34.839)
P: (121.639,109.938,40.763)
C4': (118.877,108.828,39.100)
C2': (117.834,108.233,37.071)
C2: (116.065,110.843,33.402)
N1: (116.821,111.371,32.436)
N3: (116.410,110.465,34.627)
N6: (118.894,112.077,31.711)
N7: (119.877,111.325,34.518)
N9: (118.438,110.402,35.972)
O5': (121.227,109.399,39.320)
O3': (116.575,108.091,39.105)
OP2: (123.088,110.261,40.746)
C3': (117.860,107.842,38.539)
C1': (117.924,109.754,37.176)
C5': (120.297,108.307,39.163)
O4': (118.822,109.996,38.236)
C8: (119.717,110.826,35.717)
O2': (116.659,107.825,36.412)
C6: (118.132,111.576,32.682)
C5: (118.618,111.234,33.949)
C4: (117.717,110.688,34.839)
P: (121.639,109.938,40.763)
C4': (118.877,108.828,39.100)
C2': (117.834,108.233,37.071)
C2: (116.065,110.843,33.402)
N1: (116.821,111.371,32.436)
N3: (116.410,110.465,34.627)
N6: (118.894,112.077,31.711)
N7: (119.877,111.325,34.518)
N9: (118.438,110.402,35.972)
O5': (121.227,109.399,39.320)
O3': (116.575,108.091,39.105)
Image (generated by PyMOL):