ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Z43:A40:A39

Extra

PDB:
ATOM 1 O3' A A 39 28.672 7.365 93.866 1.00 53.76 O
ATOM 2 P C A 40 28.419 8.873 94.360 1.00 53.57 P
ATOM 3 OP1 C A 40 29.491 9.759 93.815 1.00 49.01 O
ATOM 4 OP2 C A 40 28.191 8.730 95.840 1.00 52.04 O
ATOM 5 O5' C A 40 26.964 9.243 93.805 1.00 49.16 O
ATOM 6 C5' C A 40 26.593 10.204 92.869 1.00 46.65 C
ATOM 7 C4' C A 40 25.779 11.280 93.555 1.00 45.41 C
ATOM 8 O4' C A 40 24.489 11.361 92.920 1.00 45.79 O
ATOM 9 C3' C A 40 25.484 11.030 95.013 1.00 45.46 C
ATOM 10 O3' C A 40 26.514 11.664 95.725 1.00 46.47 O
ATOM 11 C2' C A 40 24.093 11.625 95.183 1.00 45.08 C
ATOM 12 O2' C A 40 24.058 13.030 95.291 1.00 45.56 O
ATOM 13 C1' C A 40 23.492 11.130 93.885 1.00 45.07 C
ATOM 14 N1 C A 40 23.115 9.702 94.033 1.00 44.20 N
ATOM 15 C2 C A 40 22.110 9.515 94.938 1.00 46.90 C
ATOM 16 O2 C A 40 21.714 10.572 95.432 1.00 51.97 O
ATOM 17 N3 C A 40 21.612 8.282 95.225 1.00 44.31 N
ATOM 18 C4 C A 40 22.122 7.239 94.618 1.00 42.99 C
ATOM 19 N4 C A 40 21.593 6.062 94.950 1.00 45.46 N
ATOM 20 C5 C A 40 23.171 7.381 93.680 1.00 43.35 C
ATOM 21 C6 C A 40 23.641 8.617 93.413 1.00 43.99 C
ATOM 22 P C A 41 26.274 12.356 97.138 1.00 47.87 P
ATOM 23 OP1 C A 41 26.321 13.828 96.958 1.00 46.81 O
ATOM 24 OP2 C A 41 27.092 11.648 98.162 1.00 46.20 O
ATOM 25 O5' C A 41 24.777 12.000 97.402 1.00 48.28 O
TER

ATOM 1 O3' A B 38 24.744 2.580 95.533 1.00 57.10 O
ATOM 2 P A B 39 24.609 4.026 94.897 1.00 57.32 P
ATOM 3 OP1 A B 39 24.751 5.051 95.964 1.00 56.15 O
ATOM 4 OP2 A B 39 23.400 4.048 94.032 1.00 59.01 O
ATOM 5 O5' A B 39 25.925 3.981 93.977 1.00 55.62 O
ATOM 6 C5' A B 39 27.225 3.976 94.567 1.00 54.53 C
ATOM 7 C4' A B 39 28.170 4.986 93.939 1.00 53.48 C
ATOM 8 O4' A B 39 28.388 4.689 92.538 1.00 53.79 O
ATOM 9 C3' A B 39 27.634 6.397 93.958 1.00 53.27 C
ATOM 10 O3' A B 39 28.672 7.365 93.866 1.00 53.76 O
ATOM 11 C2' A B 39 26.785 6.420 92.700 1.00 53.44 C
ATOM 12 O2' A B 39 26.686 7.698 92.124 1.00 52.68 O
ATOM 13 C1' A B 39 27.514 5.474 91.744 1.00 54.56 C
ATOM 14 N9 A B 39 26.603 4.605 90.981 1.00 55.22 N
ATOM 15 C8 A B 39 25.273 4.402 91.194 1.00 56.42 C
ATOM 16 N7 A B 39 24.702 3.571 90.354 1.00 56.67 N
ATOM 17 C5 A B 39 25.733 3.192 89.523 1.00 55.77 C
ATOM 18 C6 A B 39 25.793 2.313 88.424 1.00 56.31 C
ATOM 19 N6 A B 39 24.755 1.630 87.935 1.00 57.80 N
ATOM 20 N1 A B 39 26.970 2.152 87.823 1.00 55.46 N
ATOM 21 C2 A B 39 28.007 2.831 88.295 1.00 55.29 C
ATOM 22 N3 A B 39 28.082 3.673 89.316 1.00 55.17 N
ATOM 23 C4 A B 39 26.897 3.814 89.899 1.00 55.17 C
ATOM 24 P C B 40 28.419 8.873 94.360 1.00 53.57 P
ATOM 25 OP1 C B 40 29.491 9.759 93.815 1.00 49.01 O
ATOM 26 OP2 C B 40 28.191 8.730 95.840 1.00 52.04 O
ATOM 27 O5' C B 40 26.964 9.243 93.805 1.00 49.16 O
TER

Atoms:
C2: (22.110,9.515,94.938)
OP1: (29.491,9.759,93.815)
OP2: (28.191,8.730,95.840)
C4: (22.122,7.239,94.618)
O5': (26.964,9.243,93.805)
C3': (25.484,11.030,95.013)
C1': (23.492,11.130,93.885)
O4': (24.489,11.361,92.920)
C5': (26.593,10.204,92.869)
P: (28.419,8.873,94.360)
O2: (21.714,10.572,95.432)
C4': (25.779,11.280,93.555)
C2': (24.093,11.625,95.183)
O2': (24.058,13.030,95.291)
N1: (23.115,9.702,94.033)
N3: (21.612,8.282,95.225)
N4: (21.593,6.062,94.950)
C6: (23.641,8.617,93.413)
C5: (23.171,7.381,93.680)
O3': (26.514,11.664,95.725)
OP1: (24.751,5.051,95.964)
OP2: (23.400,4.048,94.032)
C3': (27.634,6.397,93.958)
C1': (27.514,5.474,91.744)
C5': (27.225,3.976,94.567)
O4': (28.388,4.689,92.538)
C8: (25.273,4.402,91.194)
O2': (26.686,7.698,92.124)
C6: (25.793,2.313,88.424)
C5: (25.733,3.192,89.523)
C4: (26.897,3.814,89.899)
P: (24.609,4.026,94.897)
C4': (28.170,4.986,93.939)
C2': (26.785,6.420,92.700)
C2: (28.007,2.831,88.295)
N1: (26.970,2.152,87.823)
N3: (28.082,3.673,89.316)
N6: (24.755,1.630,87.935)
N7: (24.702,3.571,90.354)
N9: (26.603,4.605,90.981)
O5': (25.925,3.981,93.977)
O3': (28.672,7.365,93.866)
Image (generated by PyMOL):
PyMOL image
show in jmol