Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNP:B6:B5
Extra
PDB:
ATOM 1 O3' A A 5 34.946 24.146 -2.182 1.00103.51 O
ATOM 2 P C A 6 34.667 24.778 -0.733 1.00109.90 P
ATOM 3 OP1 C A 6 33.556 24.008 -0.093 1.00108.86 O
ATOM 4 OP2 C A 6 34.539 26.250 -0.900 1.00 98.57 O
ATOM 5 O5' C A 6 36.036 24.525 0.050 1.00102.29 O
ATOM 6 C5' C A 6 36.642 23.232 0.054 1.00100.04 C
ATOM 7 C4' C A 6 38.096 23.328 0.448 1.00 96.92 C
ATOM 8 O4' C A 6 38.939 23.853 -0.613 1.00103.20 O
ATOM 9 C3' C A 6 38.411 24.240 1.610 1.00 88.87 C
ATOM 10 O3' C A 6 38.008 23.668 2.831 1.00 88.01 O
ATOM 11 C2' C A 6 39.918 24.352 1.487 1.00 96.93 C
ATOM 12 O2' C A 6 40.619 23.226 1.964 1.00 98.81 O
ATOM 13 C1' C A 6 40.070 24.499 -0.029 1.00107.62 C
ATOM 14 N1 C A 6 40.046 25.927 -0.398 1.00117.65 N
ATOM 15 C2 C A 6 41.194 26.708 -0.161 1.00119.86 C
ATOM 16 O2 C A 6 42.213 26.164 0.319 1.00112.31 O
ATOM 17 N3 C A 6 41.163 28.032 -0.464 1.00119.06 N
ATOM 18 C4 C A 6 40.056 28.572 -0.987 1.00116.70 C
ATOM 19 N4 C A 6 40.070 29.878 -1.281 1.00121.05 N
ATOM 20 C5 C A 6 38.886 27.800 -1.241 1.00112.25 C
ATOM 21 C6 C A 6 38.925 26.496 -0.937 1.00115.21 C
ATOM 22 P C A 7 37.098 24.525 3.816 1.00 79.25 P
ATOM 23 OP1 C A 7 36.856 23.768 5.077 1.00 63.55 O
ATOM 24 OP2 C A 7 35.953 24.954 2.974 1.00 93.77 O
ATOM 25 O5' C A 7 38.016 25.785 4.134 1.00 83.47 O
TER
ATOM 1 O3' C B 4 34.659 26.586 -7.312 1.00107.64 O
ATOM 2 P A B 5 33.744 27.115 -6.104 1.00107.76 P
ATOM 3 OP1 A B 5 32.329 26.943 -6.523 1.00118.36 O
ATOM 4 OP2 A B 5 34.241 28.464 -5.706 1.00100.82 O
ATOM 5 O5' A B 5 34.006 26.082 -4.927 1.00112.83 O
ATOM 6 C5' A B 5 34.352 24.736 -5.210 1.00113.72 C
ATOM 7 C4' A B 5 35.653 24.399 -4.532 1.00117.81 C
ATOM 8 O4' A B 5 36.752 25.151 -5.113 1.00116.11 O
ATOM 9 C3' A B 5 35.779 24.848 -3.089 1.00116.58 C
ATOM 10 O3' A B 5 34.946 24.146 -2.182 1.00103.51 O
ATOM 11 C2' A B 5 37.277 24.680 -2.846 1.00118.95 C
ATOM 12 O2' A B 5 37.649 23.343 -2.570 1.00110.61 O
ATOM 13 C1' A B 5 37.847 25.096 -4.208 1.00123.66 C
ATOM 14 N9 A B 5 38.574 26.368 -4.241 1.00129.62 N
ATOM 15 C8 A B 5 38.118 27.628 -4.580 1.00131.41 C
ATOM 16 N7 A B 5 39.049 28.558 -4.536 1.00129.41 N
ATOM 17 C5 A B 5 40.193 27.867 -4.144 1.00126.86 C
ATOM 18 C6 A B 5 41.524 28.282 -3.919 1.00125.10 C
ATOM 19 N6 A B 5 41.949 29.542 -4.086 1.00125.34 N
ATOM 20 N1 A B 5 42.416 27.345 -3.513 1.00118.82 N
ATOM 21 C2 A B 5 41.993 26.081 -3.352 1.00121.65 C
ATOM 22 N3 A B 5 40.776 25.567 -3.539 1.00123.80 N
ATOM 23 C4 A B 5 39.912 26.523 -3.941 1.00128.34 C
ATOM 24 P C B 6 34.667 24.778 -0.733 1.00109.90 P
ATOM 25 OP1 C B 6 33.556 24.008 -0.093 1.00108.86 O
ATOM 26 OP2 C B 6 34.539 26.250 -0.900 1.00 98.57 O
ATOM 27 O5' C B 6 36.036 24.525 0.050 1.00102.29 O
TER
ATOM 2 P C A 6 34.667 24.778 -0.733 1.00109.90 P
ATOM 3 OP1 C A 6 33.556 24.008 -0.093 1.00108.86 O
ATOM 4 OP2 C A 6 34.539 26.250 -0.900 1.00 98.57 O
ATOM 5 O5' C A 6 36.036 24.525 0.050 1.00102.29 O
ATOM 6 C5' C A 6 36.642 23.232 0.054 1.00100.04 C
ATOM 7 C4' C A 6 38.096 23.328 0.448 1.00 96.92 C
ATOM 8 O4' C A 6 38.939 23.853 -0.613 1.00103.20 O
ATOM 9 C3' C A 6 38.411 24.240 1.610 1.00 88.87 C
ATOM 10 O3' C A 6 38.008 23.668 2.831 1.00 88.01 O
ATOM 11 C2' C A 6 39.918 24.352 1.487 1.00 96.93 C
ATOM 12 O2' C A 6 40.619 23.226 1.964 1.00 98.81 O
ATOM 13 C1' C A 6 40.070 24.499 -0.029 1.00107.62 C
ATOM 14 N1 C A 6 40.046 25.927 -0.398 1.00117.65 N
ATOM 15 C2 C A 6 41.194 26.708 -0.161 1.00119.86 C
ATOM 16 O2 C A 6 42.213 26.164 0.319 1.00112.31 O
ATOM 17 N3 C A 6 41.163 28.032 -0.464 1.00119.06 N
ATOM 18 C4 C A 6 40.056 28.572 -0.987 1.00116.70 C
ATOM 19 N4 C A 6 40.070 29.878 -1.281 1.00121.05 N
ATOM 20 C5 C A 6 38.886 27.800 -1.241 1.00112.25 C
ATOM 21 C6 C A 6 38.925 26.496 -0.937 1.00115.21 C
ATOM 22 P C A 7 37.098 24.525 3.816 1.00 79.25 P
ATOM 23 OP1 C A 7 36.856 23.768 5.077 1.00 63.55 O
ATOM 24 OP2 C A 7 35.953 24.954 2.974 1.00 93.77 O
ATOM 25 O5' C A 7 38.016 25.785 4.134 1.00 83.47 O
TER
ATOM 1 O3' C B 4 34.659 26.586 -7.312 1.00107.64 O
ATOM 2 P A B 5 33.744 27.115 -6.104 1.00107.76 P
ATOM 3 OP1 A B 5 32.329 26.943 -6.523 1.00118.36 O
ATOM 4 OP2 A B 5 34.241 28.464 -5.706 1.00100.82 O
ATOM 5 O5' A B 5 34.006 26.082 -4.927 1.00112.83 O
ATOM 6 C5' A B 5 34.352 24.736 -5.210 1.00113.72 C
ATOM 7 C4' A B 5 35.653 24.399 -4.532 1.00117.81 C
ATOM 8 O4' A B 5 36.752 25.151 -5.113 1.00116.11 O
ATOM 9 C3' A B 5 35.779 24.848 -3.089 1.00116.58 C
ATOM 10 O3' A B 5 34.946 24.146 -2.182 1.00103.51 O
ATOM 11 C2' A B 5 37.277 24.680 -2.846 1.00118.95 C
ATOM 12 O2' A B 5 37.649 23.343 -2.570 1.00110.61 O
ATOM 13 C1' A B 5 37.847 25.096 -4.208 1.00123.66 C
ATOM 14 N9 A B 5 38.574 26.368 -4.241 1.00129.62 N
ATOM 15 C8 A B 5 38.118 27.628 -4.580 1.00131.41 C
ATOM 16 N7 A B 5 39.049 28.558 -4.536 1.00129.41 N
ATOM 17 C5 A B 5 40.193 27.867 -4.144 1.00126.86 C
ATOM 18 C6 A B 5 41.524 28.282 -3.919 1.00125.10 C
ATOM 19 N6 A B 5 41.949 29.542 -4.086 1.00125.34 N
ATOM 20 N1 A B 5 42.416 27.345 -3.513 1.00118.82 N
ATOM 21 C2 A B 5 41.993 26.081 -3.352 1.00121.65 C
ATOM 22 N3 A B 5 40.776 25.567 -3.539 1.00123.80 N
ATOM 23 C4 A B 5 39.912 26.523 -3.941 1.00128.34 C
ATOM 24 P C B 6 34.667 24.778 -0.733 1.00109.90 P
ATOM 25 OP1 C B 6 33.556 24.008 -0.093 1.00108.86 O
ATOM 26 OP2 C B 6 34.539 26.250 -0.900 1.00 98.57 O
ATOM 27 O5' C B 6 36.036 24.525 0.050 1.00102.29 O
TER
Atoms:
C2: (41.194,26.708,-0.161)
OP1: (33.556,24.008,-0.093)
OP2: (34.539,26.250,-0.900)
C4: (40.056,28.572,-0.987)
O5': (36.036,24.525,0.050)
C3': (38.411,24.240,1.610)
C1': (40.070,24.499,-0.029)
O4': (38.939,23.853,-0.613)
C5': (36.642,23.232,0.054)
P: (34.667,24.778,-0.733)
O2: (42.213,26.164,0.319)
C4': (38.096,23.328,0.448)
C2': (39.918,24.352,1.487)
O2': (40.619,23.226,1.964)
N1: (40.046,25.927,-0.398)
N3: (41.163,28.032,-0.464)
N4: (40.070,29.878,-1.281)
C6: (38.925,26.496,-0.937)
C5: (38.886,27.800,-1.241)
O3': (38.008,23.668,2.831)
OP1: (33.556,24.008,-0.093)
OP2: (34.539,26.250,-0.900)
C4: (40.056,28.572,-0.987)
O5': (36.036,24.525,0.050)
C3': (38.411,24.240,1.610)
C1': (40.070,24.499,-0.029)
O4': (38.939,23.853,-0.613)
C5': (36.642,23.232,0.054)
P: (34.667,24.778,-0.733)
O2: (42.213,26.164,0.319)
C4': (38.096,23.328,0.448)
C2': (39.918,24.352,1.487)
O2': (40.619,23.226,1.964)
N1: (40.046,25.927,-0.398)
N3: (41.163,28.032,-0.464)
N4: (40.070,29.878,-1.281)
C6: (38.925,26.496,-0.937)
C5: (38.886,27.800,-1.241)
O3': (38.008,23.668,2.831)
OP1: (32.329,26.943,-6.523)
OP2: (34.241,28.464,-5.706)
C3': (35.779,24.848,-3.089)
C1': (37.847,25.096,-4.208)
C5': (34.352,24.736,-5.210)
O4': (36.752,25.151,-5.113)
C8: (38.118,27.628,-4.580)
O2': (37.649,23.343,-2.570)
C6: (41.524,28.282,-3.919)
C5: (40.193,27.867,-4.144)
C4: (39.912,26.523,-3.941)
P: (33.744,27.115,-6.104)
C4': (35.653,24.399,-4.532)
C2': (37.277,24.680,-2.846)
C2: (41.993,26.081,-3.352)
N1: (42.416,27.345,-3.513)
N3: (40.776,25.567,-3.539)
N6: (41.949,29.542,-4.086)
N7: (39.049,28.558,-4.536)
N9: (38.574,26.368,-4.241)
O5': (34.006,26.082,-4.927)
O3': (34.946,24.146,-2.182)
OP2: (34.241,28.464,-5.706)
C3': (35.779,24.848,-3.089)
C1': (37.847,25.096,-4.208)
C5': (34.352,24.736,-5.210)
O4': (36.752,25.151,-5.113)
C8: (38.118,27.628,-4.580)
O2': (37.649,23.343,-2.570)
C6: (41.524,28.282,-3.919)
C5: (40.193,27.867,-4.144)
C4: (39.912,26.523,-3.941)
P: (33.744,27.115,-6.104)
C4': (35.653,24.399,-4.532)
C2': (37.277,24.680,-2.846)
C2: (41.993,26.081,-3.352)
N1: (42.416,27.345,-3.513)
N3: (40.776,25.567,-3.539)
N6: (41.949,29.542,-4.086)
N7: (39.049,28.558,-4.536)
N9: (38.574,26.368,-4.241)
O5': (34.006,26.082,-4.927)
O3': (34.946,24.146,-2.182)
Image (generated by PyMOL):