ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A2496:A2495

Extra

PDB:
ATOM 1 O3' A A2495 74.907 -24.728 -9.362 1.00 43.55 O
ATOM 2 P C A2496 76.391 -24.201 -9.694 1.00 40.28 P
ATOM 3 OP1 C A2496 76.343 -22.788 -10.145 1.00 45.12 O
ATOM 4 OP2 C A2496 77.003 -25.227 -10.561 1.00 39.75 O
ATOM 5 O5' C A2496 77.119 -24.216 -8.276 1.00 39.91 O
ATOM 6 C5' C A2496 76.826 -23.225 -7.299 1.00 49.77 C
ATOM 7 C4' C A2496 77.859 -23.272 -6.203 1.00 54.18 C
ATOM 8 O4' C A2496 77.814 -24.579 -5.571 1.00 48.87 O
ATOM 9 C3' C A2496 79.299 -23.127 -6.679 1.00 50.57 C
ATOM 10 O3' C A2496 79.725 -21.781 -6.818 1.00 42.14 O
ATOM 11 C2' C A2496 80.083 -23.840 -5.596 1.00 51.93 C
ATOM 12 O2' C A2496 80.296 -22.999 -4.483 1.00 51.96 O
ATOM 13 C1' C A2496 79.133 -24.979 -5.232 1.00 52.59 C
ATOM 14 N1 C A2496 79.458 -26.167 -6.022 1.00 48.57 N
ATOM 15 C2 C A2496 80.521 -26.984 -5.630 1.00 50.59 C
ATOM 16 O2 C A2496 81.184 -26.678 -4.631 1.00 53.55 O
ATOM 17 N3 C A2496 80.805 -28.087 -6.358 1.00 49.55 N
ATOM 18 C4 C A2496 80.077 -28.373 -7.441 1.00 52.17 C
ATOM 19 N4 C A2496 80.378 -29.475 -8.139 1.00 53.84 N
ATOM 20 C5 C A2496 79.003 -27.547 -7.863 1.00 54.15 C
ATOM 21 C6 C A2496 78.729 -26.469 -7.130 1.00 49.58 C
ATOM 22 P G A2497 80.632 -21.374 -8.070 1.00 37.95 P
ATOM 23 OP1 G A2497 80.479 -19.907 -8.260 1.00 41.26 O
ATOM 24 OP2 G A2497 80.312 -22.306 -9.180 1.00 46.58 O
ATOM 25 O5' G A2497 82.107 -21.722 -7.602 1.00 38.61 O
TER

ATOM 1 O3' A B2494 71.021 -28.595 -11.830 1.00 41.77 O
ATOM 2 P A B2495 72.382 -27.915 -12.341 1.00 44.93 P
ATOM 3 OP1 A B2495 71.983 -26.682 -13.049 1.00 43.65 O
ATOM 4 OP2 A B2495 73.190 -28.931 -13.070 1.00 37.89 O
ATOM 5 O5' A B2495 73.095 -27.500 -10.974 1.00 38.27 O
ATOM 6 C5' A B2495 72.392 -26.723 -10.026 1.00 36.37 C
ATOM 7 C4' A B2495 73.243 -26.456 -8.812 1.00 42.46 C
ATOM 8 O4' A B2495 73.253 -27.602 -7.931 1.00 41.80 O
ATOM 9 C3' A B2495 74.708 -26.097 -9.007 1.00 45.40 C
ATOM 10 O3' A B2495 74.907 -24.728 -9.362 1.00 43.55 O
ATOM 11 C2' A B2495 75.295 -26.394 -7.630 1.00 49.89 C
ATOM 12 O2' A B2495 75.190 -25.332 -6.697 1.00 53.83 O
ATOM 13 C1' A B2495 74.442 -27.578 -7.170 1.00 42.67 C
ATOM 14 N9 A B2495 75.169 -28.818 -7.389 1.00 44.83 N
ATOM 15 C8 A B2495 75.014 -29.780 -8.352 1.00 47.22 C
ATOM 16 N7 A B2495 75.857 -30.777 -8.241 1.00 42.68 N
ATOM 17 C5 A B2495 76.616 -30.441 -7.133 1.00 44.97 C
ATOM 18 C6 A B2495 77.684 -31.081 -6.494 1.00 49.53 C
ATOM 19 N6 A B2495 78.194 -32.241 -6.904 1.00 58.05 N
ATOM 20 N1 A B2495 78.225 -30.481 -5.410 1.00 50.30 N
ATOM 21 C2 A B2495 77.717 -29.306 -5.014 1.00 54.25 C
ATOM 22 N3 A B2495 76.713 -28.603 -5.533 1.00 51.04 N
ATOM 23 C4 A B2495 76.203 -29.239 -6.602 1.00 48.13 C
ATOM 24 P C B2496 76.391 -24.201 -9.694 1.00 40.28 P
ATOM 25 OP1 C B2496 76.343 -22.788 -10.145 1.00 45.12 O
ATOM 26 OP2 C B2496 77.003 -25.227 -10.561 1.00 39.75 O
ATOM 27 O5' C B2496 77.119 -24.216 -8.276 1.00 39.91 O
TER

Atoms:
C2: (80.521,-26.984,-5.630)
OP1: (76.343,-22.788,-10.145)
OP2: (77.003,-25.227,-10.561)
C4: (80.077,-28.373,-7.441)
O5': (77.119,-24.216,-8.276)
C3': (79.299,-23.127,-6.679)
C1': (79.133,-24.979,-5.232)
O4': (77.814,-24.579,-5.571)
C5': (76.826,-23.225,-7.299)
P: (76.391,-24.201,-9.694)
O2: (81.184,-26.678,-4.631)
C4': (77.859,-23.272,-6.203)
C2': (80.083,-23.840,-5.596)
O2': (80.296,-22.999,-4.483)
N1: (79.458,-26.167,-6.022)
N3: (80.805,-28.087,-6.358)
N4: (80.378,-29.475,-8.139)
C6: (78.729,-26.469,-7.130)
C5: (79.003,-27.547,-7.863)
O3': (79.725,-21.781,-6.818)
OP1: (71.983,-26.682,-13.049)
OP2: (73.190,-28.931,-13.070)
C3': (74.708,-26.097,-9.007)
C1': (74.442,-27.578,-7.170)
C5': (72.392,-26.723,-10.026)
O4': (73.253,-27.602,-7.931)
C8: (75.014,-29.780,-8.352)
O2': (75.190,-25.332,-6.697)
C6: (77.684,-31.081,-6.494)
C5: (76.616,-30.441,-7.133)
C4: (76.203,-29.239,-6.602)
P: (72.382,-27.915,-12.341)
C4': (73.243,-26.456,-8.812)
C2': (75.295,-26.394,-7.630)
C2: (77.717,-29.306,-5.014)
N1: (78.225,-30.481,-5.410)
N3: (76.713,-28.603,-5.533)
N6: (78.194,-32.241,-6.904)
N7: (75.857,-30.777,-8.241)
N9: (75.169,-28.818,-7.389)
O5': (73.095,-27.500,-10.974)
O3': (74.907,-24.728,-9.362)
Image (generated by PyMOL):
PyMOL image
show in jmol