ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MOJ:A9:A8

Extra

PDB:
ATOM 1 O3' A A 8 -9.278 -9.712 15.643 1.00194.48 O
ATOM 2 P C A 9 -8.494 -8.488 14.969 1.00172.94 P
ATOM 3 OP1 C A 9 -7.277 -9.024 14.314 1.00165.55 O
ATOM 4 OP2 C A 9 -8.387 -7.403 15.969 1.00168.42 O
ATOM 5 O5' C A 9 -9.525 -8.000 13.849 1.00188.25 O
ATOM 6 C5' C A 9 -10.062 -8.940 12.924 1.00186.42 C
ATOM 7 C4' C A 9 -11.537 -8.672 12.673 1.00181.99 C
ATOM 8 O4' C A 9 -12.295 -8.953 13.879 1.00177.11 O
ATOM 9 C3' C A 9 -11.890 -7.232 12.329 1.00177.43 C
ATOM 10 O3' C A 9 -11.708 -6.988 10.936 1.00179.33 O
ATOM 11 C2' C A 9 -13.360 -7.187 12.733 1.00168.94 C
ATOM 12 O2' C A 9 -14.196 -7.782 11.761 1.00169.47 O
ATOM 13 C1' C A 9 -13.357 -8.025 14.010 1.00164.14 C
ATOM 14 N1 C A 9 -13.161 -7.229 15.268 1.00152.76 N
ATOM 15 C2 C A 9 -14.263 -6.632 15.892 1.00141.46 C
ATOM 16 O2 C A 9 -15.388 -6.770 15.394 1.00140.17 O
ATOM 17 N3 C A 9 -14.067 -5.916 17.028 1.00131.18 N
ATOM 18 C4 C A 9 -12.843 -5.786 17.541 1.00124.47 C
ATOM 19 N4 C A 9 -12.709 -5.069 18.662 1.00103.56 N
ATOM 20 C5 C A 9 -11.706 -6.388 16.925 1.00143.26 C
ATOM 21 C6 C A 9 -11.911 -7.091 15.803 1.00152.97 C
ATOM 22 P A A 10 -11.528 -5.489 10.401 1.00208.65 P
ATOM 23 OP1 A A 10 -12.762 -5.127 9.668 1.00211.48 O
ATOM 24 OP2 A A 10 -10.217 -5.387 9.721 1.00203.46 O
ATOM 25 O5' A A 10 -11.433 -4.644 11.757 1.00184.18 O
TER

ATOM 1 O3' C B 7 -6.255 -9.486 20.749 1.00 94.40 O
ATOM 2 P A B 8 -6.364 -8.386 19.585 1.00140.79 P
ATOM 3 OP1 A B 8 -5.134 -8.458 18.761 1.00144.65 O
ATOM 4 OP2 A B 8 -6.751 -7.091 20.190 1.00120.29 O
ATOM 5 O5' A B 8 -7.572 -8.954 18.706 1.00184.88 O
ATOM 6 C5' A B 8 -7.561 -10.316 18.290 1.00185.89 C
ATOM 7 C4' A B 8 -8.937 -10.729 17.806 1.00189.33 C
ATOM 8 O4' A B 8 -9.803 -11.018 18.935 1.00186.83 O
ATOM 9 C3' A B 8 -9.667 -9.653 17.014 1.00189.13 C
ATOM 10 O3' A B 8 -9.278 -9.712 15.643 1.00194.48 O
ATOM 11 C2' A B 8 -11.122 -10.052 17.241 1.00177.17 C
ATOM 12 O2' A B 8 -11.514 -11.162 16.456 1.00166.72 O
ATOM 13 C1' A B 8 -11.086 -10.459 18.711 1.00175.28 C
ATOM 14 N9 A B 8 -11.287 -9.367 19.666 1.00162.49 N
ATOM 15 C8 A B 8 -10.380 -8.903 20.575 1.00157.17 C
ATOM 16 N7 A B 8 -10.813 -7.918 21.322 1.00150.36 N
ATOM 17 C5 A B 8 -12.102 -7.717 20.867 1.00150.14 C
ATOM 18 C6 A B 8 -13.101 -6.806 21.252 1.00145.60 C
ATOM 19 N6 A B 8 -12.922 -5.904 22.222 1.00150.27 N
ATOM 20 N1 A B 8 -14.283 -6.861 20.603 1.00135.83 N
ATOM 21 C2 A B 8 -14.445 -7.769 19.633 1.00133.64 C
ATOM 22 N3 A B 8 -13.579 -8.677 19.183 1.00142.32 N
ATOM 23 C4 A B 8 -12.415 -8.599 19.849 1.00152.98 C
ATOM 24 P C B 9 -8.494 -8.488 14.969 1.00172.94 P
ATOM 25 OP1 C B 9 -7.277 -9.024 14.314 1.00165.55 O
ATOM 26 OP2 C B 9 -8.387 -7.403 15.969 1.00168.42 O
ATOM 27 O5' C B 9 -9.525 -8.000 13.849 1.00188.25 O
TER

Atoms:
C2: (-14.263,-6.632,15.892)
OP1: (-7.277,-9.024,14.314)
OP2: (-8.387,-7.403,15.969)
C4: (-12.843,-5.786,17.541)
O5': (-9.525,-8.000,13.849)
C3': (-11.890,-7.232,12.329)
C1': (-13.357,-8.025,14.010)
O4': (-12.295,-8.953,13.879)
C5': (-10.062,-8.940,12.924)
P: (-8.494,-8.488,14.969)
O2: (-15.388,-6.770,15.394)
C4': (-11.537,-8.672,12.673)
C2': (-13.360,-7.187,12.733)
O2': (-14.196,-7.782,11.761)
N1: (-13.161,-7.229,15.268)
N3: (-14.067,-5.916,17.028)
N4: (-12.709,-5.069,18.662)
C6: (-11.911,-7.091,15.803)
C5: (-11.706,-6.388,16.925)
O3': (-11.708,-6.988,10.936)
OP1: (-5.134,-8.458,18.761)
OP2: (-6.751,-7.091,20.190)
C3': (-9.667,-9.653,17.014)
C1': (-11.086,-10.459,18.711)
C5': (-7.561,-10.316,18.290)
O4': (-9.803,-11.018,18.935)
C8: (-10.380,-8.903,20.575)
O2': (-11.514,-11.162,16.456)
C6: (-13.101,-6.806,21.252)
C5: (-12.102,-7.717,20.867)
C4: (-12.415,-8.599,19.849)
P: (-6.364,-8.386,19.585)
C4': (-8.937,-10.729,17.806)
C2': (-11.122,-10.052,17.241)
C2: (-14.445,-7.769,19.633)
N1: (-14.283,-6.861,20.603)
N3: (-13.579,-8.677,19.183)
N6: (-12.922,-5.904,22.222)
N7: (-10.813,-7.918,21.322)
N9: (-11.287,-9.367,19.666)
O5': (-7.572,-8.954,18.706)
O3': (-9.278,-9.712,15.643)
Image (generated by PyMOL):
PyMOL image
show in jmol