Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A534:A533
Extra
PDB:
ATOM 1 O3' A A 533 -104.685 21.250 -46.681 1.00 23.87 O
ATOM 2 P C A 534 -104.490 20.525 -48.086 1.00 26.37 P
ATOM 3 OP1 C A 534 -103.034 20.486 -48.349 1.00 26.37 O
ATOM 4 OP2 C A 534 -105.376 21.199 -49.052 1.00 26.37 O
ATOM 5 O5' C A 534 -105.021 19.063 -47.806 1.00 26.37 O
ATOM 6 C5' C A 534 -104.401 18.236 -46.839 1.00 26.37 C
ATOM 7 C4' C A 534 -105.280 17.072 -46.511 1.00 26.37 C
ATOM 8 O4' C A 534 -106.244 17.474 -45.517 1.00 26.37 O
ATOM 9 C3' C A 534 -106.102 16.553 -47.676 1.00 26.37 C
ATOM 10 O3' C A 534 -105.414 15.569 -48.412 1.00 26.37 O
ATOM 11 C2' C A 534 -107.372 16.038 -47.027 1.00 26.37 C
ATOM 12 O2' C A 534 -107.220 14.695 -46.595 1.00 26.37 O
ATOM 13 C1' C A 534 -107.502 16.934 -45.808 1.00 26.37 C
ATOM 14 N1 C A 534 -108.418 18.027 -46.043 1.00 26.45 N
ATOM 15 C2 C A 534 -109.723 17.665 -46.334 1.00 26.45 C
ATOM 16 O2 C A 534 -110.020 16.466 -46.389 1.00 26.45 O
ATOM 17 N3 C A 534 -110.628 18.633 -46.548 1.00 26.45 N
ATOM 18 C4 C A 534 -110.242 19.906 -46.476 1.00 26.45 C
ATOM 19 N4 C A 534 -111.183 20.821 -46.711 1.00 26.45 N
ATOM 20 C5 C A 534 -108.899 20.295 -46.172 1.00 26.45 C
ATOM 21 C6 C A 534 -108.014 19.323 -45.960 1.00 26.45 C
ATOM 22 P G A 535 -104.848 15.904 -49.862 1.00 26.82 P
ATOM 23 OP1 G A 535 -103.579 15.151 -50.020 1.00 26.82 O
ATOM 24 OP2 G A 535 -104.821 17.374 -49.977 1.00 26.82 O
ATOM 25 O5' G A 535 -105.974 15.309 -50.822 1.00 26.82 O
TER
ATOM 1 O3' U B 532 -109.258 25.701 -48.064 1.00 23.15 O
ATOM 2 P A B 533 -108.666 24.606 -47.028 1.00 23.87 P
ATOM 3 OP1 A B 533 -108.942 23.276 -47.614 1.00 23.87 O
ATOM 4 OP2 A B 533 -109.212 24.909 -45.693 1.00 23.87 O
ATOM 5 O5' A B 533 -107.095 24.898 -47.036 1.00 23.87 O
ATOM 6 C5' A B 533 -106.248 24.325 -48.030 1.00 23.87 C
ATOM 7 C4' A B 533 -105.137 23.518 -47.411 1.00 23.87 C
ATOM 8 O4' A B 533 -104.371 24.383 -46.541 1.00 23.87 O
ATOM 9 C3' A B 533 -105.591 22.333 -46.544 1.00 23.87 C
ATOM 10 O3' A B 533 -104.685 21.250 -46.681 1.00 23.87 O
ATOM 11 C2' A B 533 -105.479 22.884 -45.133 1.00 23.87 C
ATOM 12 O2' A B 533 -105.269 21.912 -44.133 1.00 23.87 O
ATOM 13 C1' A B 533 -104.281 23.802 -45.260 1.00 23.87 C
ATOM 14 N9 A B 533 -104.276 24.861 -44.271 1.00 24.09 N
ATOM 15 C8 A B 533 -105.213 25.849 -44.141 1.00 24.09 C
ATOM 16 N7 A B 533 -104.975 26.640 -43.124 1.00 24.09 N
ATOM 17 C5 A B 533 -103.829 26.113 -42.559 1.00 24.09 C
ATOM 18 C6 A B 533 -103.093 26.506 -41.461 1.00 24.09 C
ATOM 19 N6 A B 533 -103.421 27.568 -40.735 1.00 24.09 N
ATOM 20 N1 A B 533 -102.009 25.771 -41.164 1.00 24.09 N
ATOM 21 C2 A B 533 -101.683 24.718 -41.914 1.00 24.09 C
ATOM 22 N3 A B 533 -102.304 24.245 -42.978 1.00 24.09 N
ATOM 23 C4 A B 533 -103.381 25.002 -43.243 1.00 24.09 C
ATOM 24 P C B 534 -104.490 20.525 -48.086 1.00 26.37 P
ATOM 25 OP1 C B 534 -103.034 20.486 -48.349 1.00 26.37 O
ATOM 26 OP2 C B 534 -105.376 21.199 -49.052 1.00 26.37 O
ATOM 27 O5' C B 534 -105.021 19.063 -47.806 1.00 26.37 O
TER
ATOM 2 P C A 534 -104.490 20.525 -48.086 1.00 26.37 P
ATOM 3 OP1 C A 534 -103.034 20.486 -48.349 1.00 26.37 O
ATOM 4 OP2 C A 534 -105.376 21.199 -49.052 1.00 26.37 O
ATOM 5 O5' C A 534 -105.021 19.063 -47.806 1.00 26.37 O
ATOM 6 C5' C A 534 -104.401 18.236 -46.839 1.00 26.37 C
ATOM 7 C4' C A 534 -105.280 17.072 -46.511 1.00 26.37 C
ATOM 8 O4' C A 534 -106.244 17.474 -45.517 1.00 26.37 O
ATOM 9 C3' C A 534 -106.102 16.553 -47.676 1.00 26.37 C
ATOM 10 O3' C A 534 -105.414 15.569 -48.412 1.00 26.37 O
ATOM 11 C2' C A 534 -107.372 16.038 -47.027 1.00 26.37 C
ATOM 12 O2' C A 534 -107.220 14.695 -46.595 1.00 26.37 O
ATOM 13 C1' C A 534 -107.502 16.934 -45.808 1.00 26.37 C
ATOM 14 N1 C A 534 -108.418 18.027 -46.043 1.00 26.45 N
ATOM 15 C2 C A 534 -109.723 17.665 -46.334 1.00 26.45 C
ATOM 16 O2 C A 534 -110.020 16.466 -46.389 1.00 26.45 O
ATOM 17 N3 C A 534 -110.628 18.633 -46.548 1.00 26.45 N
ATOM 18 C4 C A 534 -110.242 19.906 -46.476 1.00 26.45 C
ATOM 19 N4 C A 534 -111.183 20.821 -46.711 1.00 26.45 N
ATOM 20 C5 C A 534 -108.899 20.295 -46.172 1.00 26.45 C
ATOM 21 C6 C A 534 -108.014 19.323 -45.960 1.00 26.45 C
ATOM 22 P G A 535 -104.848 15.904 -49.862 1.00 26.82 P
ATOM 23 OP1 G A 535 -103.579 15.151 -50.020 1.00 26.82 O
ATOM 24 OP2 G A 535 -104.821 17.374 -49.977 1.00 26.82 O
ATOM 25 O5' G A 535 -105.974 15.309 -50.822 1.00 26.82 O
TER
ATOM 1 O3' U B 532 -109.258 25.701 -48.064 1.00 23.15 O
ATOM 2 P A B 533 -108.666 24.606 -47.028 1.00 23.87 P
ATOM 3 OP1 A B 533 -108.942 23.276 -47.614 1.00 23.87 O
ATOM 4 OP2 A B 533 -109.212 24.909 -45.693 1.00 23.87 O
ATOM 5 O5' A B 533 -107.095 24.898 -47.036 1.00 23.87 O
ATOM 6 C5' A B 533 -106.248 24.325 -48.030 1.00 23.87 C
ATOM 7 C4' A B 533 -105.137 23.518 -47.411 1.00 23.87 C
ATOM 8 O4' A B 533 -104.371 24.383 -46.541 1.00 23.87 O
ATOM 9 C3' A B 533 -105.591 22.333 -46.544 1.00 23.87 C
ATOM 10 O3' A B 533 -104.685 21.250 -46.681 1.00 23.87 O
ATOM 11 C2' A B 533 -105.479 22.884 -45.133 1.00 23.87 C
ATOM 12 O2' A B 533 -105.269 21.912 -44.133 1.00 23.87 O
ATOM 13 C1' A B 533 -104.281 23.802 -45.260 1.00 23.87 C
ATOM 14 N9 A B 533 -104.276 24.861 -44.271 1.00 24.09 N
ATOM 15 C8 A B 533 -105.213 25.849 -44.141 1.00 24.09 C
ATOM 16 N7 A B 533 -104.975 26.640 -43.124 1.00 24.09 N
ATOM 17 C5 A B 533 -103.829 26.113 -42.559 1.00 24.09 C
ATOM 18 C6 A B 533 -103.093 26.506 -41.461 1.00 24.09 C
ATOM 19 N6 A B 533 -103.421 27.568 -40.735 1.00 24.09 N
ATOM 20 N1 A B 533 -102.009 25.771 -41.164 1.00 24.09 N
ATOM 21 C2 A B 533 -101.683 24.718 -41.914 1.00 24.09 C
ATOM 22 N3 A B 533 -102.304 24.245 -42.978 1.00 24.09 N
ATOM 23 C4 A B 533 -103.381 25.002 -43.243 1.00 24.09 C
ATOM 24 P C B 534 -104.490 20.525 -48.086 1.00 26.37 P
ATOM 25 OP1 C B 534 -103.034 20.486 -48.349 1.00 26.37 O
ATOM 26 OP2 C B 534 -105.376 21.199 -49.052 1.00 26.37 O
ATOM 27 O5' C B 534 -105.021 19.063 -47.806 1.00 26.37 O
TER
Atoms:
C2: (-109.723,17.665,-46.334)
OP1: (-103.034,20.486,-48.349)
OP2: (-105.376,21.199,-49.052)
C4: (-110.242,19.906,-46.476)
O5': (-105.021,19.063,-47.806)
C3': (-106.102,16.553,-47.676)
C1': (-107.502,16.934,-45.808)
O4': (-106.244,17.474,-45.517)
C5': (-104.401,18.236,-46.839)
P: (-104.490,20.525,-48.086)
O2: (-110.020,16.466,-46.389)
C4': (-105.280,17.072,-46.511)
C2': (-107.372,16.038,-47.027)
O2': (-107.220,14.695,-46.595)
N1: (-108.418,18.027,-46.043)
N3: (-110.628,18.633,-46.548)
N4: (-111.183,20.821,-46.711)
C6: (-108.014,19.323,-45.960)
C5: (-108.899,20.295,-46.172)
O3': (-105.414,15.569,-48.412)
OP1: (-103.034,20.486,-48.349)
OP2: (-105.376,21.199,-49.052)
C4: (-110.242,19.906,-46.476)
O5': (-105.021,19.063,-47.806)
C3': (-106.102,16.553,-47.676)
C1': (-107.502,16.934,-45.808)
O4': (-106.244,17.474,-45.517)
C5': (-104.401,18.236,-46.839)
P: (-104.490,20.525,-48.086)
O2: (-110.020,16.466,-46.389)
C4': (-105.280,17.072,-46.511)
C2': (-107.372,16.038,-47.027)
O2': (-107.220,14.695,-46.595)
N1: (-108.418,18.027,-46.043)
N3: (-110.628,18.633,-46.548)
N4: (-111.183,20.821,-46.711)
C6: (-108.014,19.323,-45.960)
C5: (-108.899,20.295,-46.172)
O3': (-105.414,15.569,-48.412)
OP1: (-108.942,23.276,-47.614)
OP2: (-109.212,24.909,-45.693)
C3': (-105.591,22.333,-46.544)
C1': (-104.281,23.802,-45.260)
C5': (-106.248,24.325,-48.030)
O4': (-104.371,24.383,-46.541)
C8: (-105.213,25.849,-44.141)
O2': (-105.269,21.912,-44.133)
C6: (-103.093,26.506,-41.461)
C5: (-103.829,26.113,-42.559)
C4: (-103.381,25.002,-43.243)
P: (-108.666,24.606,-47.028)
C4': (-105.137,23.518,-47.411)
C2': (-105.479,22.884,-45.133)
C2: (-101.683,24.718,-41.914)
N1: (-102.009,25.771,-41.164)
N3: (-102.304,24.245,-42.978)
N6: (-103.421,27.568,-40.735)
N7: (-104.975,26.640,-43.124)
N9: (-104.276,24.861,-44.271)
O5': (-107.095,24.898,-47.036)
O3': (-104.685,21.250,-46.681)
OP2: (-109.212,24.909,-45.693)
C3': (-105.591,22.333,-46.544)
C1': (-104.281,23.802,-45.260)
C5': (-106.248,24.325,-48.030)
O4': (-104.371,24.383,-46.541)
C8: (-105.213,25.849,-44.141)
O2': (-105.269,21.912,-44.133)
C6: (-103.093,26.506,-41.461)
C5: (-103.829,26.113,-42.559)
C4: (-103.381,25.002,-43.243)
P: (-108.666,24.606,-47.028)
C4': (-105.137,23.518,-47.411)
C2': (-105.479,22.884,-45.133)
C2: (-101.683,24.718,-41.914)
N1: (-102.009,25.771,-41.164)
N3: (-102.304,24.245,-42.978)
N6: (-103.421,27.568,-40.735)
N7: (-104.975,26.640,-43.124)
N9: (-104.276,24.861,-44.271)
O5': (-107.095,24.898,-47.036)
O3': (-104.685,21.250,-46.681)
Image (generated by PyMOL):