Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B29:B28
Extra
PDB:
ATOM 1 O3' A A 28 -173.226 -47.797 26.605 1.00 9.69 O
ATOM 2 P C A 29 -173.208 -46.649 27.724 1.00 0.01 P
ATOM 3 OP1 C A 29 -171.808 -46.210 27.889 1.00 0.01 O
ATOM 4 OP2 C A 29 -173.935 -47.186 28.910 1.00 0.01 O
ATOM 5 O5' C A 29 -174.054 -45.484 27.040 1.00 0.01 O
ATOM 6 C5' C A 29 -173.531 -44.727 25.963 1.00 0.01 C
ATOM 7 C4' C A 29 -174.526 -44.623 24.842 1.00 0.01 C
ATOM 8 O4' C A 29 -175.262 -45.866 24.727 1.00 0.01 O
ATOM 9 C3' C A 29 -175.617 -43.583 25.012 1.00 0.01 C
ATOM 10 O3' C A 29 -175.193 -42.289 24.693 1.00 0.01 O
ATOM 11 C2' C A 29 -176.695 -44.108 24.087 1.00 0.01 C
ATOM 12 O2' C A 29 -176.339 -43.910 22.728 1.00 0.01 O
ATOM 13 C1' C A 29 -176.612 -45.594 24.402 1.00 0.01 C
ATOM 14 N1 C A 29 -177.451 -45.924 25.575 1.00 0.01 N
ATOM 15 C2 C A 29 -178.852 -45.713 25.525 1.00 0.01 C
ATOM 16 O2 C A 29 -179.421 -45.305 24.492 1.00 0.01 O
ATOM 17 N3 C A 29 -179.591 -45.991 26.612 1.00 0.01 N
ATOM 18 C4 C A 29 -178.990 -46.426 27.708 1.00 0.01 C
ATOM 19 N4 C A 29 -179.743 -46.673 28.780 1.00 0.01 N
ATOM 20 C5 C A 29 -177.574 -46.631 27.764 1.00 0.01 C
ATOM 21 C6 C A 29 -176.840 -46.374 26.687 1.00 0.01 C
ATOM 22 P C A 30 -175.097 -41.194 25.843 1.00 9.64 P
ATOM 23 OP1 C A 30 -174.437 -40.008 25.258 1.00 9.64 O
ATOM 24 OP2 C A 30 -174.497 -41.849 27.024 1.00 9.64 O
ATOM 25 O5' C A 30 -176.597 -40.880 26.124 1.00 9.64 O
TER
ATOM 1 O3' C B 27 -174.060 -52.954 29.703 1.00 3.25 O
ATOM 2 P A B 28 -174.190 -51.502 30.312 1.00 9.69 P
ATOM 3 OP1 A B 28 -172.919 -51.195 30.974 1.00 9.69 O
ATOM 4 OP2 A B 28 -175.438 -51.454 31.095 1.00 9.69 O
ATOM 5 O5' A B 28 -174.332 -50.633 29.036 1.00 9.69 O
ATOM 6 C5' A B 28 -173.236 -50.498 28.183 1.00 9.69 C
ATOM 7 C4' A B 28 -173.682 -50.167 26.818 1.00 9.69 C
ATOM 8 O4' A B 28 -174.798 -51.013 26.456 1.00 9.69 O
ATOM 9 C3' A B 28 -174.231 -48.781 26.641 1.00 9.69 C
ATOM 10 O3' A B 28 -173.226 -47.797 26.605 1.00 9.69 O
ATOM 11 C2' A B 28 -174.988 -48.942 25.350 1.00 9.69 C
ATOM 12 O2' A B 28 -174.081 -49.063 24.266 1.00 9.69 O
ATOM 13 C1' A B 28 -175.639 -50.303 25.580 1.00 9.69 C
ATOM 14 N9 A B 28 -176.958 -50.173 26.205 1.00 9.70 N
ATOM 15 C8 A B 28 -177.346 -50.550 27.465 1.00 9.70 C
ATOM 16 N7 A B 28 -178.607 -50.294 27.721 1.00 9.70 N
ATOM 17 C5 A B 28 -179.041 -49.716 26.549 1.00 9.70 C
ATOM 18 C6 A B 28 -180.275 -49.225 26.196 1.00 9.70 C
ATOM 19 N6 A B 28 -181.277 -49.274 27.055 1.00 9.70 N
ATOM 20 N1 A B 28 -180.431 -48.714 24.953 1.00 9.70 N
ATOM 21 C2 A B 28 -179.378 -48.699 24.124 1.00 9.70 C
ATOM 22 N3 A B 28 -178.142 -49.135 24.352 1.00 9.70 N
ATOM 23 C4 A B 28 -178.052 -49.632 25.601 1.00 9.70 C
ATOM 24 P C B 29 -173.208 -46.649 27.724 1.00 0.01 P
ATOM 25 OP1 C B 29 -171.808 -46.210 27.889 1.00 0.01 O
ATOM 26 OP2 C B 29 -173.935 -47.186 28.910 1.00 0.01 O
ATOM 27 O5' C B 29 -174.054 -45.484 27.040 1.00 0.01 O
TER
ATOM 2 P C A 29 -173.208 -46.649 27.724 1.00 0.01 P
ATOM 3 OP1 C A 29 -171.808 -46.210 27.889 1.00 0.01 O
ATOM 4 OP2 C A 29 -173.935 -47.186 28.910 1.00 0.01 O
ATOM 5 O5' C A 29 -174.054 -45.484 27.040 1.00 0.01 O
ATOM 6 C5' C A 29 -173.531 -44.727 25.963 1.00 0.01 C
ATOM 7 C4' C A 29 -174.526 -44.623 24.842 1.00 0.01 C
ATOM 8 O4' C A 29 -175.262 -45.866 24.727 1.00 0.01 O
ATOM 9 C3' C A 29 -175.617 -43.583 25.012 1.00 0.01 C
ATOM 10 O3' C A 29 -175.193 -42.289 24.693 1.00 0.01 O
ATOM 11 C2' C A 29 -176.695 -44.108 24.087 1.00 0.01 C
ATOM 12 O2' C A 29 -176.339 -43.910 22.728 1.00 0.01 O
ATOM 13 C1' C A 29 -176.612 -45.594 24.402 1.00 0.01 C
ATOM 14 N1 C A 29 -177.451 -45.924 25.575 1.00 0.01 N
ATOM 15 C2 C A 29 -178.852 -45.713 25.525 1.00 0.01 C
ATOM 16 O2 C A 29 -179.421 -45.305 24.492 1.00 0.01 O
ATOM 17 N3 C A 29 -179.591 -45.991 26.612 1.00 0.01 N
ATOM 18 C4 C A 29 -178.990 -46.426 27.708 1.00 0.01 C
ATOM 19 N4 C A 29 -179.743 -46.673 28.780 1.00 0.01 N
ATOM 20 C5 C A 29 -177.574 -46.631 27.764 1.00 0.01 C
ATOM 21 C6 C A 29 -176.840 -46.374 26.687 1.00 0.01 C
ATOM 22 P C A 30 -175.097 -41.194 25.843 1.00 9.64 P
ATOM 23 OP1 C A 30 -174.437 -40.008 25.258 1.00 9.64 O
ATOM 24 OP2 C A 30 -174.497 -41.849 27.024 1.00 9.64 O
ATOM 25 O5' C A 30 -176.597 -40.880 26.124 1.00 9.64 O
TER
ATOM 1 O3' C B 27 -174.060 -52.954 29.703 1.00 3.25 O
ATOM 2 P A B 28 -174.190 -51.502 30.312 1.00 9.69 P
ATOM 3 OP1 A B 28 -172.919 -51.195 30.974 1.00 9.69 O
ATOM 4 OP2 A B 28 -175.438 -51.454 31.095 1.00 9.69 O
ATOM 5 O5' A B 28 -174.332 -50.633 29.036 1.00 9.69 O
ATOM 6 C5' A B 28 -173.236 -50.498 28.183 1.00 9.69 C
ATOM 7 C4' A B 28 -173.682 -50.167 26.818 1.00 9.69 C
ATOM 8 O4' A B 28 -174.798 -51.013 26.456 1.00 9.69 O
ATOM 9 C3' A B 28 -174.231 -48.781 26.641 1.00 9.69 C
ATOM 10 O3' A B 28 -173.226 -47.797 26.605 1.00 9.69 O
ATOM 11 C2' A B 28 -174.988 -48.942 25.350 1.00 9.69 C
ATOM 12 O2' A B 28 -174.081 -49.063 24.266 1.00 9.69 O
ATOM 13 C1' A B 28 -175.639 -50.303 25.580 1.00 9.69 C
ATOM 14 N9 A B 28 -176.958 -50.173 26.205 1.00 9.70 N
ATOM 15 C8 A B 28 -177.346 -50.550 27.465 1.00 9.70 C
ATOM 16 N7 A B 28 -178.607 -50.294 27.721 1.00 9.70 N
ATOM 17 C5 A B 28 -179.041 -49.716 26.549 1.00 9.70 C
ATOM 18 C6 A B 28 -180.275 -49.225 26.196 1.00 9.70 C
ATOM 19 N6 A B 28 -181.277 -49.274 27.055 1.00 9.70 N
ATOM 20 N1 A B 28 -180.431 -48.714 24.953 1.00 9.70 N
ATOM 21 C2 A B 28 -179.378 -48.699 24.124 1.00 9.70 C
ATOM 22 N3 A B 28 -178.142 -49.135 24.352 1.00 9.70 N
ATOM 23 C4 A B 28 -178.052 -49.632 25.601 1.00 9.70 C
ATOM 24 P C B 29 -173.208 -46.649 27.724 1.00 0.01 P
ATOM 25 OP1 C B 29 -171.808 -46.210 27.889 1.00 0.01 O
ATOM 26 OP2 C B 29 -173.935 -47.186 28.910 1.00 0.01 O
ATOM 27 O5' C B 29 -174.054 -45.484 27.040 1.00 0.01 O
TER
Atoms:
C2: (-178.852,-45.713,25.525)
OP1: (-171.808,-46.210,27.889)
OP2: (-173.935,-47.186,28.910)
C4: (-178.990,-46.426,27.708)
O5': (-174.054,-45.484,27.040)
C3': (-175.617,-43.583,25.012)
C1': (-176.612,-45.594,24.402)
O4': (-175.262,-45.866,24.727)
C5': (-173.531,-44.727,25.963)
P: (-173.208,-46.649,27.724)
O2: (-179.421,-45.305,24.492)
C4': (-174.526,-44.623,24.842)
C2': (-176.695,-44.108,24.087)
O2': (-176.339,-43.910,22.728)
N1: (-177.451,-45.924,25.575)
N3: (-179.591,-45.991,26.612)
N4: (-179.743,-46.673,28.780)
C6: (-176.840,-46.374,26.687)
C5: (-177.574,-46.631,27.764)
O3': (-175.193,-42.289,24.693)
OP1: (-171.808,-46.210,27.889)
OP2: (-173.935,-47.186,28.910)
C4: (-178.990,-46.426,27.708)
O5': (-174.054,-45.484,27.040)
C3': (-175.617,-43.583,25.012)
C1': (-176.612,-45.594,24.402)
O4': (-175.262,-45.866,24.727)
C5': (-173.531,-44.727,25.963)
P: (-173.208,-46.649,27.724)
O2: (-179.421,-45.305,24.492)
C4': (-174.526,-44.623,24.842)
C2': (-176.695,-44.108,24.087)
O2': (-176.339,-43.910,22.728)
N1: (-177.451,-45.924,25.575)
N3: (-179.591,-45.991,26.612)
N4: (-179.743,-46.673,28.780)
C6: (-176.840,-46.374,26.687)
C5: (-177.574,-46.631,27.764)
O3': (-175.193,-42.289,24.693)
OP1: (-172.919,-51.195,30.974)
OP2: (-175.438,-51.454,31.095)
C3': (-174.231,-48.781,26.641)
C1': (-175.639,-50.303,25.580)
C5': (-173.236,-50.498,28.183)
O4': (-174.798,-51.013,26.456)
C8: (-177.346,-50.550,27.465)
O2': (-174.081,-49.063,24.266)
C6: (-180.275,-49.225,26.196)
C5: (-179.041,-49.716,26.549)
C4: (-178.052,-49.632,25.601)
P: (-174.190,-51.502,30.312)
C4': (-173.682,-50.167,26.818)
C2': (-174.988,-48.942,25.350)
C2: (-179.378,-48.699,24.124)
N1: (-180.431,-48.714,24.953)
N3: (-178.142,-49.135,24.352)
N6: (-181.277,-49.274,27.055)
N7: (-178.607,-50.294,27.721)
N9: (-176.958,-50.173,26.205)
O5': (-174.332,-50.633,29.036)
O3': (-173.226,-47.797,26.605)
OP2: (-175.438,-51.454,31.095)
C3': (-174.231,-48.781,26.641)
C1': (-175.639,-50.303,25.580)
C5': (-173.236,-50.498,28.183)
O4': (-174.798,-51.013,26.456)
C8: (-177.346,-50.550,27.465)
O2': (-174.081,-49.063,24.266)
C6: (-180.275,-49.225,26.196)
C5: (-179.041,-49.716,26.549)
C4: (-178.052,-49.632,25.601)
P: (-174.190,-51.502,30.312)
C4': (-173.682,-50.167,26.818)
C2': (-174.988,-48.942,25.350)
C2: (-179.378,-48.699,24.124)
N1: (-180.431,-48.714,24.953)
N3: (-178.142,-49.135,24.352)
N6: (-181.277,-49.274,27.055)
N7: (-178.607,-50.294,27.721)
N9: (-176.958,-50.173,26.205)
O5': (-174.332,-50.633,29.036)
O3': (-173.226,-47.797,26.605)
Image (generated by PyMOL):