Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A10:A9
Extra
PDB:
ATOM 1 O3' A A 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 2 P C A 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 3 OP1 C A 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 4 OP2 C A 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 5 O5' C A 10 15.772 -14.419 -20.618 1.00 50.27 O
ATOM 6 C5' C A 10 16.589 -13.393 -20.072 1.00 49.90 C
ATOM 7 C4' C A 10 18.056 -13.666 -20.301 1.00 46.95 C
ATOM 8 O4' C A 10 18.415 -14.952 -19.729 1.00 49.41 O
ATOM 9 C3' C A 10 18.502 -13.779 -21.750 1.00 47.24 C
ATOM 10 O3' C A 10 18.680 -12.522 -22.379 1.00 51.53 O
ATOM 11 C2' C A 10 19.783 -14.591 -21.633 1.00 44.60 C
ATOM 12 O2' C A 10 20.852 -13.779 -21.170 1.00 46.45 O
ATOM 13 C1' C A 10 19.409 -15.569 -20.524 1.00 47.86 C
ATOM 14 N1 C A 10 18.867 -16.831 -21.065 1.00 44.56 N
ATOM 15 C2 C A 10 19.770 -17.800 -21.505 1.00 44.04 C
ATOM 16 O2 C A 10 20.985 -17.564 -21.426 1.00 46.20 O
ATOM 17 N3 C A 10 19.295 -18.961 -22.004 1.00 43.08 N
ATOM 18 C4 C A 10 17.980 -19.168 -22.070 1.00 42.77 C
ATOM 19 N4 C A 10 17.563 -20.333 -22.571 1.00 43.71 N
ATOM 20 C5 C A 10 17.036 -18.196 -21.627 1.00 43.95 C
ATOM 21 C6 C A 10 17.520 -17.049 -21.136 1.00 44.02 C
ATOM 22 P U A 11 18.557 -12.398 -23.977 1.00 50.86 P
ATOM 23 OP1 U A 11 18.785 -10.973 -24.327 1.00 42.77 O
ATOM 24 OP2 U A 11 17.274 -13.028 -24.364 1.00 44.44 O
ATOM 25 O5' U A 11 19.773 -13.284 -24.496 1.00 43.03 O
TER
ATOM 1 O3' A B 8 17.932 -13.484 -15.528 1.00 61.39 O
ATOM 2 P A B 9 16.481 -14.036 -15.101 1.00 56.57 P
ATOM 3 OP1 A B 9 15.668 -12.862 -14.706 1.00 40.22 O
ATOM 4 OP2 A B 9 16.695 -15.118 -14.111 1.00 60.97 O
ATOM 5 O5' A B 9 15.917 -14.651 -16.458 1.00 51.90 O
ATOM 6 C5' A B 9 16.348 -15.922 -16.918 1.00 51.65 C
ATOM 7 C4' A B 9 15.178 -16.808 -17.264 1.00 47.73 C
ATOM 8 O4' A B 9 14.557 -17.302 -16.050 1.00 51.16 O
ATOM 9 C3' A B 9 14.040 -16.140 -18.020 1.00 49.40 C
ATOM 10 O3' A B 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 11 C2' A B 9 12.846 -17.025 -17.681 1.00 51.52 C
ATOM 12 O2' A B 9 12.836 -18.188 -18.495 1.00 51.04 O
ATOM 13 C1' A B 9 13.166 -17.443 -16.244 1.00 51.92 C
ATOM 14 N9 A B 9 12.464 -16.609 -15.248 1.00 55.88 N
ATOM 15 C8 A B 9 12.983 -15.615 -14.456 1.00 60.12 C
ATOM 16 N7 A B 9 12.105 -15.060 -13.655 1.00 60.91 N
ATOM 17 C5 A B 9 10.927 -15.742 -13.936 1.00 59.04 C
ATOM 18 C6 A B 9 9.623 -15.628 -13.420 1.00 59.89 C
ATOM 19 N6 A B 9 9.274 -14.749 -12.477 1.00 61.90 N
ATOM 20 N1 A B 9 8.677 -16.458 -13.913 1.00 55.13 N
ATOM 21 C2 A B 9 9.031 -17.337 -14.860 1.00 56.09 C
ATOM 22 N3 A B 9 10.221 -17.540 -15.423 1.00 49.28 N
ATOM 23 C4 A B 9 11.136 -16.701 -14.910 1.00 52.23 C
ATOM 24 P C B 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 25 OP1 C B 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 26 OP2 C B 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 27 O5' C B 10 15.772 -14.419 -20.618 1.00 50.27 O
TER
ATOM 2 P C A 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 3 OP1 C A 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 4 OP2 C A 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 5 O5' C A 10 15.772 -14.419 -20.618 1.00 50.27 O
ATOM 6 C5' C A 10 16.589 -13.393 -20.072 1.00 49.90 C
ATOM 7 C4' C A 10 18.056 -13.666 -20.301 1.00 46.95 C
ATOM 8 O4' C A 10 18.415 -14.952 -19.729 1.00 49.41 O
ATOM 9 C3' C A 10 18.502 -13.779 -21.750 1.00 47.24 C
ATOM 10 O3' C A 10 18.680 -12.522 -22.379 1.00 51.53 O
ATOM 11 C2' C A 10 19.783 -14.591 -21.633 1.00 44.60 C
ATOM 12 O2' C A 10 20.852 -13.779 -21.170 1.00 46.45 O
ATOM 13 C1' C A 10 19.409 -15.569 -20.524 1.00 47.86 C
ATOM 14 N1 C A 10 18.867 -16.831 -21.065 1.00 44.56 N
ATOM 15 C2 C A 10 19.770 -17.800 -21.505 1.00 44.04 C
ATOM 16 O2 C A 10 20.985 -17.564 -21.426 1.00 46.20 O
ATOM 17 N3 C A 10 19.295 -18.961 -22.004 1.00 43.08 N
ATOM 18 C4 C A 10 17.980 -19.168 -22.070 1.00 42.77 C
ATOM 19 N4 C A 10 17.563 -20.333 -22.571 1.00 43.71 N
ATOM 20 C5 C A 10 17.036 -18.196 -21.627 1.00 43.95 C
ATOM 21 C6 C A 10 17.520 -17.049 -21.136 1.00 44.02 C
ATOM 22 P U A 11 18.557 -12.398 -23.977 1.00 50.86 P
ATOM 23 OP1 U A 11 18.785 -10.973 -24.327 1.00 42.77 O
ATOM 24 OP2 U A 11 17.274 -13.028 -24.364 1.00 44.44 O
ATOM 25 O5' U A 11 19.773 -13.284 -24.496 1.00 43.03 O
TER
ATOM 1 O3' A B 8 17.932 -13.484 -15.528 1.00 61.39 O
ATOM 2 P A B 9 16.481 -14.036 -15.101 1.00 56.57 P
ATOM 3 OP1 A B 9 15.668 -12.862 -14.706 1.00 40.22 O
ATOM 4 OP2 A B 9 16.695 -15.118 -14.111 1.00 60.97 O
ATOM 5 O5' A B 9 15.917 -14.651 -16.458 1.00 51.90 O
ATOM 6 C5' A B 9 16.348 -15.922 -16.918 1.00 51.65 C
ATOM 7 C4' A B 9 15.178 -16.808 -17.264 1.00 47.73 C
ATOM 8 O4' A B 9 14.557 -17.302 -16.050 1.00 51.16 O
ATOM 9 C3' A B 9 14.040 -16.140 -18.020 1.00 49.40 C
ATOM 10 O3' A B 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 11 C2' A B 9 12.846 -17.025 -17.681 1.00 51.52 C
ATOM 12 O2' A B 9 12.836 -18.188 -18.495 1.00 51.04 O
ATOM 13 C1' A B 9 13.166 -17.443 -16.244 1.00 51.92 C
ATOM 14 N9 A B 9 12.464 -16.609 -15.248 1.00 55.88 N
ATOM 15 C8 A B 9 12.983 -15.615 -14.456 1.00 60.12 C
ATOM 16 N7 A B 9 12.105 -15.060 -13.655 1.00 60.91 N
ATOM 17 C5 A B 9 10.927 -15.742 -13.936 1.00 59.04 C
ATOM 18 C6 A B 9 9.623 -15.628 -13.420 1.00 59.89 C
ATOM 19 N6 A B 9 9.274 -14.749 -12.477 1.00 61.90 N
ATOM 20 N1 A B 9 8.677 -16.458 -13.913 1.00 55.13 N
ATOM 21 C2 A B 9 9.031 -17.337 -14.860 1.00 56.09 C
ATOM 22 N3 A B 9 10.221 -17.540 -15.423 1.00 49.28 N
ATOM 23 C4 A B 9 11.136 -16.701 -14.910 1.00 52.23 C
ATOM 24 P C B 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 25 OP1 C B 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 26 OP2 C B 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 27 O5' C B 10 15.772 -14.419 -20.618 1.00 50.27 O
TER
Atoms:
C2: (19.770,-17.800,-21.505)
OP1: (13.931,-13.592,-19.109)
OP2: (13.373,-14.733,-21.323)
C4: (17.980,-19.168,-22.070)
O5': (15.772,-14.419,-20.618)
C3': (18.502,-13.779,-21.750)
C1': (19.409,-15.569,-20.524)
O4': (18.415,-14.952,-19.729)
C5': (16.589,-13.393,-20.072)
P: (14.262,-14.604,-20.142)
O2: (20.985,-17.564,-21.426)
C4': (18.056,-13.666,-20.301)
C2': (19.783,-14.591,-21.633)
O2': (20.852,-13.779,-21.170)
N1: (18.867,-16.831,-21.065)
N3: (19.295,-18.961,-22.004)
N4: (17.563,-20.333,-22.571)
C6: (17.520,-17.049,-21.136)
C5: (17.036,-18.196,-21.627)
O3': (18.680,-12.522,-22.379)
OP1: (13.931,-13.592,-19.109)
OP2: (13.373,-14.733,-21.323)
C4: (17.980,-19.168,-22.070)
O5': (15.772,-14.419,-20.618)
C3': (18.502,-13.779,-21.750)
C1': (19.409,-15.569,-20.524)
O4': (18.415,-14.952,-19.729)
C5': (16.589,-13.393,-20.072)
P: (14.262,-14.604,-20.142)
O2: (20.985,-17.564,-21.426)
C4': (18.056,-13.666,-20.301)
C2': (19.783,-14.591,-21.633)
O2': (20.852,-13.779,-21.170)
N1: (18.867,-16.831,-21.065)
N3: (19.295,-18.961,-22.004)
N4: (17.563,-20.333,-22.571)
C6: (17.520,-17.049,-21.136)
C5: (17.036,-18.196,-21.627)
O3': (18.680,-12.522,-22.379)
OP1: (15.668,-12.862,-14.706)
OP2: (16.695,-15.118,-14.111)
C3': (14.040,-16.140,-18.020)
C1': (13.166,-17.443,-16.244)
C5': (16.348,-15.922,-16.918)
O4': (14.557,-17.302,-16.050)
C8: (12.983,-15.615,-14.456)
O2': (12.836,-18.188,-18.495)
C6: (9.623,-15.628,-13.420)
C5: (10.927,-15.742,-13.936)
C4: (11.136,-16.701,-14.910)
P: (16.481,-14.036,-15.101)
C4': (15.178,-16.808,-17.264)
C2': (12.846,-17.025,-17.681)
C2: (9.031,-17.337,-14.860)
N1: (8.677,-16.458,-13.913)
N3: (10.221,-17.540,-15.423)
N6: (9.274,-14.749,-12.477)
N7: (12.105,-15.060,-13.655)
N9: (12.464,-16.609,-15.248)
O5': (15.917,-14.651,-16.458)
O3': (14.291,-16.037,-19.412)
OP2: (16.695,-15.118,-14.111)
C3': (14.040,-16.140,-18.020)
C1': (13.166,-17.443,-16.244)
C5': (16.348,-15.922,-16.918)
O4': (14.557,-17.302,-16.050)
C8: (12.983,-15.615,-14.456)
O2': (12.836,-18.188,-18.495)
C6: (9.623,-15.628,-13.420)
C5: (10.927,-15.742,-13.936)
C4: (11.136,-16.701,-14.910)
P: (16.481,-14.036,-15.101)
C4': (15.178,-16.808,-17.264)
C2': (12.846,-17.025,-17.681)
C2: (9.031,-17.337,-14.860)
N1: (8.677,-16.458,-13.913)
N3: (10.221,-17.540,-15.423)
N6: (9.274,-14.749,-12.477)
N7: (12.105,-15.060,-13.655)
N9: (12.464,-16.609,-15.248)
O5': (15.917,-14.651,-16.458)
O3': (14.291,-16.037,-19.412)
Image (generated by PyMOL):