Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C10:C9
Extra
PDB:
ATOM 1 O3' A A 9 19.880 -23.947 -61.840 1.00 50.07 O
ATOM 2 P C A 10 18.646 -23.157 -62.501 1.00 53.66 P
ATOM 3 OP1 C A 10 17.633 -22.959 -61.436 1.00 50.37 O
ATOM 4 OP2 C A 10 18.257 -23.902 -63.723 1.00 47.19 O
ATOM 5 O5' C A 10 19.293 -21.757 -62.903 1.00 56.05 O
ATOM 6 C5' C A 10 19.204 -20.635 -62.035 1.00 48.43 C
ATOM 7 C4' C A 10 20.395 -19.717 -62.183 1.00 46.04 C
ATOM 8 O4' C A 10 21.603 -20.398 -61.754 1.00 44.33 O
ATOM 9 C3' C A 10 20.715 -19.257 -63.597 1.00 49.80 C
ATOM 10 O3' C A 10 19.895 -18.184 -64.030 1.00 50.76 O
ATOM 11 C2' C A 10 22.193 -18.898 -63.504 1.00 46.80 C
ATOM 12 O2' C A 10 22.363 -17.620 -62.908 1.00 43.65 O
ATOM 13 C1' C A 10 22.703 -19.959 -62.526 1.00 43.77 C
ATOM 14 N1 C A 10 23.289 -21.124 -63.223 1.00 44.45 N
ATOM 15 C2 C A 10 24.609 -21.030 -63.671 1.00 42.44 C
ATOM 16 O2 C A 10 25.225 -19.970 -63.478 1.00 39.15 O
ATOM 17 N3 C A 10 25.171 -22.084 -64.308 1.00 43.28 N
ATOM 18 C4 C A 10 24.469 -23.203 -64.495 1.00 47.02 C
ATOM 19 N4 C A 10 25.062 -24.219 -65.127 1.00 41.91 N
ATOM 20 C5 C A 10 23.124 -23.326 -64.040 1.00 45.94 C
ATOM 21 C6 C A 10 22.577 -22.276 -63.412 1.00 44.13 C
ATOM 22 P U A 11 19.432 -18.092 -65.568 1.00 55.50 P
ATOM 23 OP1 U A 11 18.349 -17.080 -65.637 1.00 48.28 O
ATOM 24 OP2 U A 11 19.146 -19.476 -66.023 1.00 57.65 O
ATOM 25 O5' U A 11 20.734 -17.539 -66.298 1.00 53.55 O
TER
ATOM 1 O3' A B 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 2 P A B 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 3 OP1 A B 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 4 OP2 A B 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 5 O5' A B 9 19.302 -22.192 -58.587 1.00 47.17 O
ATOM 6 C5' A B 9 20.595 -22.287 -59.163 1.00 45.49 C
ATOM 7 C4' A B 9 20.893 -23.690 -59.627 1.00 43.51 C
ATOM 8 O4' A B 9 21.023 -24.570 -58.483 1.00 48.34 O
ATOM 9 C3' A B 9 19.825 -24.350 -60.482 1.00 46.63 C
ATOM 10 O3' A B 9 19.880 -23.947 -61.840 1.00 50.07 O
ATOM 11 C2' A B 9 20.102 -25.834 -60.275 1.00 49.16 C
ATOM 12 O2' A B 9 21.186 -26.260 -61.086 1.00 48.79 O
ATOM 13 C1' A B 9 20.554 -25.859 -58.813 1.00 45.79 C
ATOM 14 N9 A B 9 19.455 -26.213 -57.897 1.00 45.36 N
ATOM 15 C8 A B 9 18.825 -25.420 -56.973 1.00 44.40 C
ATOM 16 N7 A B 9 17.882 -26.036 -56.303 1.00 38.30 N
ATOM 17 C5 A B 9 17.895 -27.323 -56.822 1.00 46.48 C
ATOM 18 C6 A B 9 17.134 -28.469 -56.535 1.00 49.10 C
ATOM 19 N6 A B 9 16.167 -28.503 -55.615 1.00 51.41 N
ATOM 20 N1 A B 9 17.402 -29.594 -57.235 1.00 47.66 N
ATOM 21 C2 A B 9 18.370 -29.560 -58.159 1.00 48.62 C
ATOM 22 N3 A B 9 19.154 -28.547 -58.517 1.00 47.17 N
ATOM 23 C4 A B 9 18.861 -27.447 -57.802 1.00 45.21 C
ATOM 24 P C B 10 18.646 -23.157 -62.501 1.00 53.66 P
ATOM 25 OP1 C B 10 17.633 -22.959 -61.436 1.00 50.37 O
ATOM 26 OP2 C B 10 18.257 -23.902 -63.723 1.00 47.19 O
ATOM 27 O5' C B 10 19.293 -21.757 -62.903 1.00 56.05 O
TER
ATOM 2 P C A 10 18.646 -23.157 -62.501 1.00 53.66 P
ATOM 3 OP1 C A 10 17.633 -22.959 -61.436 1.00 50.37 O
ATOM 4 OP2 C A 10 18.257 -23.902 -63.723 1.00 47.19 O
ATOM 5 O5' C A 10 19.293 -21.757 -62.903 1.00 56.05 O
ATOM 6 C5' C A 10 19.204 -20.635 -62.035 1.00 48.43 C
ATOM 7 C4' C A 10 20.395 -19.717 -62.183 1.00 46.04 C
ATOM 8 O4' C A 10 21.603 -20.398 -61.754 1.00 44.33 O
ATOM 9 C3' C A 10 20.715 -19.257 -63.597 1.00 49.80 C
ATOM 10 O3' C A 10 19.895 -18.184 -64.030 1.00 50.76 O
ATOM 11 C2' C A 10 22.193 -18.898 -63.504 1.00 46.80 C
ATOM 12 O2' C A 10 22.363 -17.620 -62.908 1.00 43.65 O
ATOM 13 C1' C A 10 22.703 -19.959 -62.526 1.00 43.77 C
ATOM 14 N1 C A 10 23.289 -21.124 -63.223 1.00 44.45 N
ATOM 15 C2 C A 10 24.609 -21.030 -63.671 1.00 42.44 C
ATOM 16 O2 C A 10 25.225 -19.970 -63.478 1.00 39.15 O
ATOM 17 N3 C A 10 25.171 -22.084 -64.308 1.00 43.28 N
ATOM 18 C4 C A 10 24.469 -23.203 -64.495 1.00 47.02 C
ATOM 19 N4 C A 10 25.062 -24.219 -65.127 1.00 41.91 N
ATOM 20 C5 C A 10 23.124 -23.326 -64.040 1.00 45.94 C
ATOM 21 C6 C A 10 22.577 -22.276 -63.412 1.00 44.13 C
ATOM 22 P U A 11 19.432 -18.092 -65.568 1.00 55.50 P
ATOM 23 OP1 U A 11 18.349 -17.080 -65.637 1.00 48.28 O
ATOM 24 OP2 U A 11 19.146 -19.476 -66.023 1.00 57.65 O
ATOM 25 O5' U A 11 20.734 -17.539 -66.298 1.00 53.55 O
TER
ATOM 1 O3' A B 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 2 P A B 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 3 OP1 A B 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 4 OP2 A B 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 5 O5' A B 9 19.302 -22.192 -58.587 1.00 47.17 O
ATOM 6 C5' A B 9 20.595 -22.287 -59.163 1.00 45.49 C
ATOM 7 C4' A B 9 20.893 -23.690 -59.627 1.00 43.51 C
ATOM 8 O4' A B 9 21.023 -24.570 -58.483 1.00 48.34 O
ATOM 9 C3' A B 9 19.825 -24.350 -60.482 1.00 46.63 C
ATOM 10 O3' A B 9 19.880 -23.947 -61.840 1.00 50.07 O
ATOM 11 C2' A B 9 20.102 -25.834 -60.275 1.00 49.16 C
ATOM 12 O2' A B 9 21.186 -26.260 -61.086 1.00 48.79 O
ATOM 13 C1' A B 9 20.554 -25.859 -58.813 1.00 45.79 C
ATOM 14 N9 A B 9 19.455 -26.213 -57.897 1.00 45.36 N
ATOM 15 C8 A B 9 18.825 -25.420 -56.973 1.00 44.40 C
ATOM 16 N7 A B 9 17.882 -26.036 -56.303 1.00 38.30 N
ATOM 17 C5 A B 9 17.895 -27.323 -56.822 1.00 46.48 C
ATOM 18 C6 A B 9 17.134 -28.469 -56.535 1.00 49.10 C
ATOM 19 N6 A B 9 16.167 -28.503 -55.615 1.00 51.41 N
ATOM 20 N1 A B 9 17.402 -29.594 -57.235 1.00 47.66 N
ATOM 21 C2 A B 9 18.370 -29.560 -58.159 1.00 48.62 C
ATOM 22 N3 A B 9 19.154 -28.547 -58.517 1.00 47.17 N
ATOM 23 C4 A B 9 18.861 -27.447 -57.802 1.00 45.21 C
ATOM 24 P C B 10 18.646 -23.157 -62.501 1.00 53.66 P
ATOM 25 OP1 C B 10 17.633 -22.959 -61.436 1.00 50.37 O
ATOM 26 OP2 C B 10 18.257 -23.902 -63.723 1.00 47.19 O
ATOM 27 O5' C B 10 19.293 -21.757 -62.903 1.00 56.05 O
TER
Atoms:
C2: (24.609,-21.030,-63.671)
OP1: (17.633,-22.959,-61.436)
OP2: (18.257,-23.902,-63.723)
C4: (24.469,-23.203,-64.495)
O5': (19.293,-21.757,-62.903)
C3': (20.715,-19.257,-63.597)
C1': (22.703,-19.959,-62.526)
O4': (21.603,-20.398,-61.754)
C5': (19.204,-20.635,-62.035)
P: (18.646,-23.157,-62.501)
O2: (25.225,-19.970,-63.478)
C4': (20.395,-19.717,-62.183)
C2': (22.193,-18.898,-63.504)
O2': (22.363,-17.620,-62.908)
N1: (23.289,-21.124,-63.223)
N3: (25.171,-22.084,-64.308)
N4: (25.062,-24.219,-65.127)
C6: (22.577,-22.276,-63.412)
C5: (23.124,-23.326,-64.040)
O3': (19.895,-18.184,-64.030)
OP1: (17.633,-22.959,-61.436)
OP2: (18.257,-23.902,-63.723)
C4: (24.469,-23.203,-64.495)
O5': (19.293,-21.757,-62.903)
C3': (20.715,-19.257,-63.597)
C1': (22.703,-19.959,-62.526)
O4': (21.603,-20.398,-61.754)
C5': (19.204,-20.635,-62.035)
P: (18.646,-23.157,-62.501)
O2: (25.225,-19.970,-63.478)
C4': (20.395,-19.717,-62.183)
C2': (22.193,-18.898,-63.504)
O2': (22.363,-17.620,-62.908)
N1: (23.289,-21.124,-63.223)
N3: (25.171,-22.084,-64.308)
N4: (25.062,-24.219,-65.127)
C6: (22.577,-22.276,-63.412)
C5: (23.124,-23.326,-64.040)
O3': (19.895,-18.184,-64.030)
OP1: (17.643,-21.494,-56.828)
OP2: (20.078,-21.932,-56.208)
C3': (19.825,-24.350,-60.482)
C1': (20.554,-25.859,-58.813)
C5': (20.595,-22.287,-59.163)
O4': (21.023,-24.570,-58.483)
C8: (18.825,-25.420,-56.973)
O2': (21.186,-26.260,-61.086)
C6: (17.134,-28.469,-56.535)
C5: (17.895,-27.323,-56.822)
C4: (18.861,-27.447,-57.802)
P: (19.080,-21.454,-57.193)
C4': (20.893,-23.690,-59.627)
C2': (20.102,-25.834,-60.275)
C2: (18.370,-29.560,-58.159)
N1: (17.402,-29.594,-57.235)
N3: (19.154,-28.547,-58.517)
N6: (16.167,-28.503,-55.615)
N7: (17.882,-26.036,-56.303)
N9: (19.455,-26.213,-57.897)
O5': (19.302,-22.192,-58.587)
O3': (19.880,-23.947,-61.840)
OP2: (20.078,-21.932,-56.208)
C3': (19.825,-24.350,-60.482)
C1': (20.554,-25.859,-58.813)
C5': (20.595,-22.287,-59.163)
O4': (21.023,-24.570,-58.483)
C8: (18.825,-25.420,-56.973)
O2': (21.186,-26.260,-61.086)
C6: (17.134,-28.469,-56.535)
C5: (17.895,-27.323,-56.822)
C4: (18.861,-27.447,-57.802)
P: (19.080,-21.454,-57.193)
C4': (20.893,-23.690,-59.627)
C2': (20.102,-25.834,-60.275)
C2: (18.370,-29.560,-58.159)
N1: (17.402,-29.594,-57.235)
N3: (19.154,-28.547,-58.517)
N6: (16.167,-28.503,-55.615)
N7: (17.882,-26.036,-56.303)
N9: (19.455,-26.213,-57.897)
O5': (19.302,-22.192,-58.587)
O3': (19.880,-23.947,-61.840)
Image (generated by PyMOL):